Jatropha Genome Database

JcCA0036251.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0036251.10 + phase: 1 /pseudo/partial
         (168 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014111 Protein HVA22, putative                                 172   8e-44
29813.m001456 Protein HVA22, putative                                 128   1e-30
29804.m001550 conserved hypothetical protein                           58   3e-09
29993.m001046 Protein HVA22, putative                                  54   4e-08
29804.m001549 conserved hypothetical protein                           53   8e-08
30147.m014467 Protein HVA22, putative                                  47   6e-06

>30147.m014111 Protein HVA22, putative
          Length = 171

 Score =  172 bits (435), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 78/97 (80%), Positives = 91/97 (93%), Gaps = 1/97 (1%)

Query: 62  IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRPLFVNPKQTVNIWYVPRKKDVFSKPDDI 121
           IPIWSYAKLI+TCWLVIPYFSGAAYVYEHFVRPLFVNP+QT+N+WYVPRKKD+FSK DDI
Sbjct: 72  IPIWSYAKLIVTCWLVIPYFSGAAYVYEHFVRPLFVNPQQTINVWYVPRKKDIFSKKDDI 131

Query: 122 LTAAERYIEENGTEAFEKLIHRVSDEALTLGFSHLLL 158
           LTAAERYIEENGTEAFEKLIHR +D++ + G+++ + 
Sbjct: 132 LTAAERYIEENGTEAFEKLIHR-ADKSRSSGYANTIF 167


>29813.m001456 Protein HVA22, putative
          Length = 175

 Score =  128 bits (321), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 56/87 (64%), Positives = 74/87 (85%), Gaps = 1/87 (1%)

Query: 62  IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRPLFVNPKQTVN-IWYVPRKKDVFSKPDD 120
           I +W +AKLI+TCWLV+P F+GAAYVY++F+RP ++NP+ +   IWYVPRKKDVF+K DD
Sbjct: 71  ISVWPFAKLIVTCWLVLPQFNGAAYVYKNFIRPFYMNPQSSAQRIWYVPRKKDVFTKQDD 130

Query: 121 ILTAAERYIEENGTEAFEKLIHRVSDE 147
           ILTAAE+Y+EE+GTEAFE+LI +   E
Sbjct: 131 ILTAAEKYMEEHGTEAFERLITKADRE 157


>29804.m001550 conserved hypothetical protein
          Length = 989

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 3/80 (3%)

Query: 63  PIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRP-LFVNPKQTVNIWYVPRKKDVFSKPDDI 121
           P W   +L++   LV PYF G+ YVY+H + P L ++P+  +N++   + K+ F K   +
Sbjct: 91  PFWHIIRLVLVGCLVTPYFDGSFYVYKHIILPCLSMDPQVVINMFI--KLKESFLKKCYL 148

Query: 122 LTAAERYIEENGTEAFEKLI 141
           L   ER ++E G EA E L+
Sbjct: 149 LIVVERDVKEYGPEAMENLV 168


>29993.m001046 Protein HVA22, putative
          Length = 156

 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)

Query: 62  IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRPLFVNPKQTVNIWYVPRKKDVFSKPD-D 120
           +P W Y KL+   WLV+P F+GAAY+YE+ VR  +V     V+  Y   ++ V      D
Sbjct: 67  LPFWPYIKLLFCMWLVLPIFNGAAYIYENMVRK-YVKIGGRVSGNYSDDQRKVLQMMSLD 125

Query: 121 ILTAAERYIEENGTEAFEKLIHRVSDEA 148
              +  +Y+++ G +AFE+ I     E 
Sbjct: 126 ARKSVVQYVDKYGWDAFERAIKAAEKET 153


>29804.m001549 conserved hypothetical protein
          Length = 591

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 62  IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRP-LFVNPKQTVNIWYVPRKKDVFSKPDD 120
           +P W Y KLI+   LVIP+F G+ YVY+  V P + V+P   ++ W++  K+  F + D+
Sbjct: 72  LPSWPYIKLIIVGCLVIPHFGGSFYVYKKLVHPCMSVDPHSILD-WFIKLKE--FLEQDN 128

Query: 121 ILTAAERYIEENGTEAFEKLI 141
           +    +R  +E   +A E LI
Sbjct: 129 LPVDVKREAKETVPDAVENLI 149


>30147.m014467 Protein HVA22, putative
          Length = 114

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 24/32 (75%)

Query: 62 IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVR 93
          IPIW   KL++  WLV+P F GAA++YE +VR
Sbjct: 38 IPIWYTVKLVLVAWLVLPQFRGAAFIYEKYVR 69