Jatropha Genome Database

JcCA0029841.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0029841.20 + phase: 0 
         (261 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29727.m000494 conserved hypothetical protein                          256   9e-69
29739.m003727 conserved hypothetical protein                          152   2e-37
29765.m000754 conserved hypothetical protein                           71   5e-13
29739.m003659 conserved hypothetical protein                           69   3e-12
29653.m000290 conserved hypothetical protein                           66   2e-11
30128.m009047 conserved hypothetical protein                           64   6e-11

>29727.m000494 conserved hypothetical protein
          Length = 269

 Score =  256 bits (653), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 148/238 (62%), Positives = 173/238 (72%), Gaps = 16/238 (6%)

Query: 1   MANLVNKSGKA-APEKPNFTQTCNLLSQYLKERGRFGDINLGINGKIEA-KGSESSRLPK 58
           MA+LV +SGKA A EK NF QTCNLLSQYLKERG FG+I  GI  K EA KG E+SR P 
Sbjct: 1   MAHLVQRSGKAVATEKTNFAQTCNLLSQYLKERGSFGNITYGITSKPEANKGPEASRTPA 60

Query: 59  TTLNLLPDIEQNSSAENPSRPSL--SAEIKTADFFPKFVGSGSPYPVEDSANKSADLRKP 116
           TTLNLLP +E  + AEN SR     S  IK  + FP+ VG  S  PVE S NK+ADLRK 
Sbjct: 61  TTLNLLPSME--NPAENSSRQDYVPSTNIKPMELFPQLVGFSSQNPVEGSTNKAADLRK- 117

Query: 117 PSSIPADPVPAQMTIFYGGRVMVFDDFPADKAKEIFALAAKGSSNTTNGFLTSLPTASAM 176
             S   D   AQMTIFYGG+VMVFDDFPA+KAKEI ALA+KG+SNTTNGF     TASA+
Sbjct: 118 --SSKGDSTTAQMTIFYGGQVMVFDDFPAEKAKEIIALASKGTSNTTNGFT----TASAV 171

Query: 177 DKSRTPSVS--NDAGGEGLQLRPQDTNGSDLPIARRASLHRFLEKRKERASSKAPYQM 232
           +K+   +++   +   EGLQLRPQ  + SDLPIARRASLHRF EKRK+RA++KAPYQ+
Sbjct: 172 EKANQSAIAPPPNKVREGLQLRPQ-ADDSDLPIARRASLHRFFEKRKDRAAAKAPYQI 228


>29739.m003727 conserved hypothetical protein
          Length = 289

 Score =  152 bits (384), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/252 (43%), Positives = 149/252 (59%), Gaps = 43/252 (17%)

Query: 14  EKPNFTQTCNLLSQYLKERGRFGDINLGI-----NGKIEAK-----GSESSRLPK--TTL 61
           EK +F+Q C+LLSQYLKE+G FGD++LGI     N   +AK     G+ +S + K  TT+
Sbjct: 20  EKNSFSQKCSLLSQYLKEKGSFGDLSLGITCNNSNNNADAKINTGNGNGASDMIKQTTTM 79

Query: 62  NLLPDIEQNSSAENPSRPSLSAEIKTADFFPKFVG--SGSPYPVEDSANKS-ADLRKPPS 118
           NL P  E++   + P+R ++    ++ D FP+  G  + +P P ED   ++ + + KP S
Sbjct: 80  NLFPMSEKH--VDVPNR-NMVTNCRSMDLFPQQSGFVTTTPEPKEDMQKRADSSVHKPAS 136

Query: 119 SIPADPVPAQMTIFYGGRVMVFDDFPADKAKEIFALAAKGSSNTTNGF----LTSLPTAS 174
               +   AQ+TIFY G+V+VF+DFPADKAKE+  LA KG  N+ N F    + S P A 
Sbjct: 137 PESQN---AQLTIFYAGQVIVFNDFPADKAKEVMLLATKG--NSLNRFPSVPVKSHPPAF 191

Query: 175 AMDKSRTPS---------------VSNDAGGEGLQLRPQDTNGSDLPIARRASLHRFLEK 219
           A   S+ P+                SN+   E  +L P  T GSDLPIARRASLHRFLEK
Sbjct: 192 APSVSKAPAESNSSLSSASNAVLNFSNNLIQER-KLTPPPTIGSDLPIARRASLHRFLEK 250

Query: 220 RKERASSKAPYQ 231
           RKER ++ APYQ
Sbjct: 251 RKERITASAPYQ 262


>29765.m000754 conserved hypothetical protein
          Length = 176

 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 57/104 (54%), Gaps = 16/104 (15%)

Query: 127 AQMTIFYGGRVMVFDDFPADKAKEIFALAAKGSSNTTNGFLTSLPTASAMDKSRTPSVSN 186
           AQ+TIFY G V V+D+ PADKA+ I  LA  G S  +    T  P A      + P+ S 
Sbjct: 58  AQLTIFYAGEVNVYDNIPADKAQAIMLLA--GESCVSKPMATEKPKAEV----KKPTDST 111

Query: 187 DAGGEGLQLRPQDTNGSDLPIARRASLHRFLEKRKERASSKAPY 230
            A    LQ        +DLPIAR+ SL  FLEKR+ R + K+PY
Sbjct: 112 SAC--KLQ--------TDLPIARKLSLQHFLEKRRRRRTGKSPY 145


>29739.m003659 conserved hypothetical protein
          Length = 220

 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 13/118 (11%)

Query: 126 PAQMTIFYGGRVMVFDDFPADKAKEIFALAAKGSSNT----TNGFLTSLPTASAMDKSRT 181
           P Q+TIFYGG V+VFD  PA+K +EI  +AA  ++      T       P ++    +R+
Sbjct: 62  PNQLTIFYGGNVLVFDAIPAEKVREILFIAAAAAAAVKPADTKKTAAVSPASNTPVLTRS 121

Query: 182 PSVSNDAGG---EGLQLRPQDTNGS------DLPIARRASLHRFLEKRKERASSKAPY 230
           PS+ +          QL P     S      + PIARR SL RF EKR++R  SK+PY
Sbjct: 122 PSLQSTTSALPSPQAQLYPIHQASSLCKMQAEFPIARRNSLQRFFEKRRDRLGSKSPY 179


>29653.m000290 conserved hypothetical protein
          Length = 258

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 76/184 (41%), Gaps = 57/184 (30%)

Query: 99  SPYPVEDSANKSADLRKPPSSIPADPVPAQMTIFYGGRVMVFDDFPADKAKEIFALAAKG 158
           S +P   S   + DLR    S  A   PAQ+TIFYGG V V+DD   +KA+ +  LA  G
Sbjct: 54  SVHPTPSSIVGTTDLRNGSKSPGA---PAQLTIFYGGSVCVYDDISPEKAQAMMLLAGHG 110

Query: 159 SSNTTN-------------------GFL----------TSLPT----------------- 172
           SS T N                   G++          + LP+                 
Sbjct: 111 SSVTQNKMFSTAQVQAPITRASAGDGYIENKVHTTSPCSGLPSPISVTSSSPNELAAVRS 170

Query: 173 ----ASAMDKSRTPSVSNDAGGEGLQLRPQDTNGSDLPIARRASLHRFLEKRKERASSKA 228
               AS  +++ TP      G     L P       +P AR+ASL RFLEKRKER  + +
Sbjct: 171 VGALASGSNQTETPRAITSVGPGSATLIP----AVAVPQARKASLARFLEKRKERVMNAS 226

Query: 229 PYQM 232
           PY +
Sbjct: 227 PYNV 230


>30128.m009047 conserved hypothetical protein
          Length = 177

 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 55/115 (47%), Gaps = 27/115 (23%)

Query: 116 PPSSIPADPVPAQMTIFYGGRVMVFDDFPADKAKEIFALAAKGSSNTTNGFLTSLPTASA 175
           P  ++   P  A +TIFY G V VFD  P DKA+ I  LA  G S             SA
Sbjct: 82  PRPTLETPPQTAPLTIFYNGAVAVFD-VPRDKAETILKLAENGVSK------------SA 128

Query: 176 MDKSRTPSVSNDAGGEGLQLRPQDTNGSDLPIARRASLHRFLEKRKERASSKAPY 230
              S+   + N  G              DLPIARR SL RFLEKRKER +S +PY
Sbjct: 129 ESTSQKHLLDNLDG--------------DLPIARRKSLQRFLEKRKERLTSASPY 169