Jatropha Genome Database

JcCA0029371.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0029371.10 + phase: 0 /pseudo/partial
         (178 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29709.m001223 ribose-phosphate pyrophosphokinase, putative            215   9e-57
30054.m000794 ribose-phosphate pyrophosphokinase, putative            206   4e-54
30054.m000790 ribose-phosphate pyrophosphokinase, putative            187   2e-48

>29709.m001223 ribose-phosphate pyrophosphokinase, putative
          Length = 374

 Score =  215 bits (547), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 102/104 (98%), Positives = 104/104 (100%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 133
           GDVKGKVAVMVDDMIDTAGTI+KGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE
Sbjct: 270 GDVKGKVAVMVDDMIDTAGTISKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 329

Query: 134 VIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCSVSSIF 177
           VIITNTIPVAEQNYFPQLT+LSVANLLGETIWRVHDDCSVSSIF
Sbjct: 330 VIITNTIPVAEQNYFPQLTILSVANLLGETIWRVHDDCSVSSIF 373


>30054.m000794 ribose-phosphate pyrophosphokinase, putative
          Length = 351

 Score =  206 bits (525), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 98/105 (93%), Positives = 101/105 (96%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 133
           GDVKGKVAVMVDDMIDTAGTI KGA LL QEGAREVYAC THAVFSPPAIERLSSGLFQE
Sbjct: 247 GDVKGKVAVMVDDMIDTAGTIAKGAELLQQEGAREVYACCTHAVFSPPAIERLSSGLFQE 306

Query: 134 VIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCSVSSIFQ 178
           VIITN+IPVAE+NYFPQLTVLS+ANLLGETIWRVHDDCSVSSIFQ
Sbjct: 307 VIITNSIPVAEKNYFPQLTVLSIANLLGETIWRVHDDCSVSSIFQ 351


>30054.m000790 ribose-phosphate pyrophosphokinase, putative
          Length = 395

 Score =  187 bits (475), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 91/105 (86%), Positives = 95/105 (90%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 133
           GDVKGKVAVM+DDMIDTAGTITKGA LLHQEGAR VYAC THAVFSPPAIERLSSG FQE
Sbjct: 291 GDVKGKVAVMLDDMIDTAGTITKGADLLHQEGARAVYACCTHAVFSPPAIERLSSGRFQE 350

Query: 134 VIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCSVSSIFQ 178
           VI+TNTIPV E+NYFPQLTVLSVA LLGETIWR+H   SVSSI Q
Sbjct: 351 VIVTNTIPVVEKNYFPQLTVLSVARLLGETIWRIHVGSSVSSISQ 395