Jatropha Genome Database

JcCA0029141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0029141.10 - phase: 0 /partial
         (635 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29693.m002052 starch synthase, putative                              1004   0.0  
28179.m000474 starch synthase, putative                               229   3e-60
29842.m003588 starch synthase, putative                               163   2e-40
28838.m000254 starch synthase, putative                                63   4e-10
29866.m000609 starch synthase, putative                                61   2e-09

>29693.m002052 starch synthase, putative
          Length = 998

 Score = 1004 bits (2595), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/629 (78%), Positives = 534/629 (84%), Gaps = 41/629 (6%)

Query: 7   SQAIDGGEKLSSIPDEMKPSGLKIEGGEQFSHVRLEDLIGMIRNAEKNILLLNQARVHAL 66
           S  I GGE+LSSIPDE+K SGLKI+GGEQ S V+LEDLIGMIRNAEKNILLLNQARV+AL
Sbjct: 137 SLGIYGGEELSSIPDEIKSSGLKIDGGEQLSRVQLEDLIGMIRNAEKNILLLNQARVNAL 196

Query: 67  EDLERILAEKEILQGEINVLEMRLAETDARMKVAAQEKIHVELMGDQLEKLKNELTYRGE 126
           EDL+RILAEKEILQGEIN+LEMRLAETDARMKVAAQEKIHV+LM DQLEKL+NEL YR E
Sbjct: 197 EDLQRILAEKEILQGEINILEMRLAETDARMKVAAQEKIHVDLMEDQLEKLRNELAYRSE 256

Query: 127 NQDKLLNEEPSLLQNSSVDYLSEELNLLRAENSSLKNDMEALKRELSDVKDTDERVITLE 186
           NQ +LLNE+  LLQ++++  LSEELN LR EN+SLKND+EALK ELS+VKDTDE      
Sbjct: 257 NQSRLLNEDVPLLQDTTLHSLSEELNSLREENTSLKNDIEALKLELSNVKDTDEH----- 311

Query: 187 KERXXXXXXXXXXXXXXXTSQEDVSKLSSLKVECKDLWEKVENLQALLEKATKQADQAIL 246
                                               LWEKVE LQALL+KATKQADQAIL
Sbjct: 312 ------------------------------------LWEKVETLQALLDKATKQADQAIL 335

Query: 247 VLQQNQELRKKVDKLEESLEEANVYKLSSEKLQQSNELMQQKIKLLEERLQRSDEEIGSY 306
           VLQQNQELRKKVDKLEESLEEAN YKLSSEKLQQ NE MQQK+KLLEERLQRSDEEI SY
Sbjct: 336 VLQQNQELRKKVDKLEESLEEANAYKLSSEKLQQYNEFMQQKMKLLEERLQRSDEEINSY 395

Query: 307 VQVYQESVQEFQDTLNTLKEQSKKKALDQPVDDMPWEFWSRLLLMIDGWVLEEKLSKENA 366
           V +YQESVQEFQD LN +KE+SKKKALD+PV+DMPWEFWS LLLMIDGW+LE+K+S ++A
Sbjct: 396 VSLYQESVQEFQDMLNIVKEESKKKALDEPVNDMPWEFWSHLLLMIDGWLLEKKISADDA 455

Query: 367 KLLRDMVWKRDRRVCDAYLECREKNDREAVSTFLKLTSSPASSGLHVIHIAAEMAPVAKX 426
           KLLRDMV KRDRR+ D Y ECR+KN+ EA+S FLKLTSSP+S GLHVIHIAAEMAPVAK 
Sbjct: 456 KLLRDMVQKRDRRIHDTYFECRQKNENEAISMFLKLTSSPSSPGLHVIHIAAEMAPVAKV 515

Query: 427 XXXXXXXXXXXKALQKRGHLVEIILPKYDCMQYDGIGNLRALDVVVESYFDGKLYKNKIW 486
                      KALQKRGHLVEIILPKYDCMQY+GIGNLRALDV VESYFDGKLYKNKIW
Sbjct: 516 GGLGDVVAGLGKALQKRGHLVEIILPKYDCMQYNGIGNLRALDVTVESYFDGKLYKNKIW 575

Query: 487 VGTIEGLPVYFIEPHHPNKFFWRGQFYGEHDDFKRFSFFSRAALELLLQAGKKPDIIHCH 546
           VGTIEGLPVYFIEPHHP+KFFWRGQFYGEHDDFKRFSFFSRAALELL Q+GKKPDIIH H
Sbjct: 576 VGTIEGLPVYFIEPHHPDKFFWRGQFYGEHDDFKRFSFFSRAALELLHQSGKKPDIIHSH 635

Query: 547 DWQTAFVAPLYWDIYAPKGLNSARICFTCHNFEYQGTAPASELVSCGLDVQELNRPDRMQ 606
           DWQTAFVAPLYWD+YAPKGLNSARICFTCHNFEYQGTAPASEL SCGLDV  LNRPDRMQ
Sbjct: 636 DWQTAFVAPLYWDLYAPKGLNSARICFTCHNFEYQGTAPASELASCGLDVHHLNRPDRMQ 695

Query: 607 DNSAHDRINPVKGAVVFSNIVTTVSPTYA 635
           DN AHDRINPVKGAVVFSNIVTTVSPTYA
Sbjct: 696 DNLAHDRINPVKGAVVFSNIVTTVSPTYA 724


>28179.m000474 starch synthase, putative
          Length = 720

 Score =  229 bits (584), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 102/227 (44%), Positives = 146/227 (64%)

Query: 409 SGLHVIHIAAEMAPVAKXXXXXXXXXXXXKALQKRGHLVEIILPKYDCMQYDGIGNLRAL 468
           S LH++HI  EMAPV +             ALQK+GHLVE+ILPKY  +    I  L+ +
Sbjct: 205 SSLHIVHICTEMAPVTEVGYLASYVTGLSLALQKKGHLVEVILPKYASLNLSEIHGLQEI 264

Query: 469 DVVVESYFDGKLYKNKIWVGTIEGLPVYFIEPHHPNKFFWRGQFYGEHDDFKRFSFFSRA 528
                SYF+G+L+ NKIW G + G+ V FI+P + + FF R + YG  DDF+RFS+FSRA
Sbjct: 265 QAESYSYFNGQLHGNKIWTGVVNGIGVTFIQPLYYSSFFNREKIYGYTDDFERFSYFSRA 324

Query: 529 ALELLLQAGKKPDIIHCHDWQTAFVAPLYWDIYAPKGLNSARICFTCHNFEYQGTAPASE 588
           +L+ L ++GK+PD++H H+W+TA V PL+WD++A +GL   RI  TCH+ + Q       
Sbjct: 325 SLDFLTKSGKQPDVLHIHNWETAIVGPLFWDVFAKQGLEGTRILLTCHSLDSQCLEKPDM 384

Query: 589 LVSCGLDVQELNRPDRMQDNSAHDRINPVKGAVVFSNIVTTVSPTYA 635
           L  CGLD   L+RP+R+QDN+    +N +KG +V+SN V  VS  ++
Sbjct: 385 LALCGLDPGRLHRPNRLQDNAKTQFVNILKGGIVYSNKVVIVSSIHS 431


>29842.m003588 starch synthase, putative
          Length = 1095

 Score =  163 bits (413), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/241 (37%), Positives = 122/241 (50%), Gaps = 44/241 (18%)

Query: 396 VSTFLKLTSSPASSGLHVIHIAAEMAPVAKXXXXXXXXXXXXKALQKRGHLVEIILPKYD 455
           V  F  +   P    +H++H+A EMAP+AK            +A+Q   H V+IILPKYD
Sbjct: 635 VPVFGGIAKEPP---MHIVHVAVEMAPIAKVGGLGDVVTSLSRAVQDLNHSVDIILPKYD 691

Query: 456 CMQYDGIGNLRAL-DVVVESYFDGKLYKNKIWVGTIEGLPVYFIEPHHPNKFFWRGQFYG 514
           CM      NL  + D+  +  +     + K+W G +EGL VYF+EP   N  FW G  YG
Sbjct: 692 CM------NLTHVKDIHYQKSYSWGGTEIKVWFGKVEGLSVYFLEPQ--NGMFWTGCIYG 743

Query: 515 EHDDFKRFSFFSRAALELLLQAGKKPDIIHCHDWQTAFVAPLYWDIYAPKGLNSARICFT 574
             +D +RF FF  AALE L Q+G  PDIIHCHDW +A VA L+ D Y   GL+ AR+ FT
Sbjct: 744 CRNDGERFGFFCHAALEFLQQSGFHPDIIHCHDWSSAPVAWLFKDHYMHYGLSKARVVFT 803

Query: 575 CHNFEYQGTAPASELVSCGLDVQELNRPDRMQDNSAHDRINPVKGAVVFSNIVTTVSPTY 634
            HN E+                                  N +  A+ +S++ TTVSPTY
Sbjct: 804 IHNLEFGA--------------------------------NNIGRAMAYSDMATTVSPTY 831

Query: 635 A 635
           +
Sbjct: 832 S 832


>28838.m000254 starch synthase, putative
          Length = 754

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 100/249 (40%), Gaps = 27/249 (10%)

Query: 403 TSSPASSG---LHVIHIAAEMAPVAKXXXXXXXXXXXXKALQKRGHLVEIILPKYDCMQY 459
           T SP  +G   ++VI ++AE AP +K            KAL +RGH V ++ P+Y     
Sbjct: 252 TKSPPLAGANVMNVILVSAECAPWSKTGGLGDVAGSLPKALARRGHRVMVVAPRY----- 306

Query: 460 DGIGNL-RALDVVVESYF--DGKLYKNKIWVGTIEGLPVYFIEPHHPNKFFWRGQFYGEH 516
              GN     D+ V   +  DG+ ++   +   I+G+   FIE   P         YG +
Sbjct: 307 ---GNYAETQDIGVRKRYKVDGQDFEVTYFQAFIDGVDFVFIE--CPMFRHIESNIYGGN 361

Query: 517 --DDFKRFSFFSRAALELLLQA-------GKKPDIIHCHDWQTAFVAPLYWDIYAPKGL- 566
             D  KR   F +AA+E+           G    +   +DW TA +       Y   GL 
Sbjct: 362 RVDILKRMVLFCKAAIEVPWHVPCGGICYGDGNLVFIANDWHTALLPVYLRAYYRDNGLM 421

Query: 567 NSARICFTCHNFEYQGTAPASELVSCGLDVQELNRPDRMQDNSAHDRINPVKGAVVFSNI 626
              R     HN  +QG  P  + V   L    ++   ++ D    D  N     +  ++ 
Sbjct: 422 QFTRSVLVIHNIAHQGRGPMDDFVYTDLPEHYIDL-FKLYDPVGGDHFNIFAAGLKTADR 480

Query: 627 VTTVSPTYA 635
           V TVS  YA
Sbjct: 481 VVTVSHGYA 489


>29866.m000609 starch synthase, putative
          Length = 624

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 103/274 (37%), Gaps = 76/274 (27%)

Query: 410 GLHVIHIAAEMAPVAKXXXXXXXXXXXXKALQKRGHLVEIILPKYDCMQY---------- 459
           G+++I +  E+ P +K             A+   GH V  I P+YD  QY          
Sbjct: 79  GMNLIFVGTEVGPWSKTGGLGDVLGGLPPAMAANGHRVMTISPRYD--QYKDAWDTNFVV 136

Query: 460 -----DGIGNLRALDV-----VVESYFDGKLYKNKIWVGTIEGLPVYFIEPHHPNKFFWR 509
                D I  +R         V   + D  ++  KIW  T                    
Sbjct: 137 QVKVGDRIETVRYFHCCYKRGVDRVFVDHPMFLEKIWGKT-------------------G 177

Query: 510 GQFYGEH--DDFK----RFSFFSRAALE----LLLQAGK------KPDIIH-CHDWQTAF 552
            + YG    DD++    RFS F +AA+E    L L   K        D+I   +DW TA 
Sbjct: 178 SKLYGPQAGDDYEDNQLRFSLFCQAAIEAPRLLSLNTSKYFSGPYGEDVIFIANDWHTAL 237

Query: 553 VAPLYWDIYAPKGL-NSARICFTCHNFEYQGTAPASELVSCGLDVQELNRPDRMQ----- 606
           V      IY  +G+  +A++ F  HN  YQG    +       D   LN PD+ +     
Sbjct: 238 VPCYLKSIYKARGIYKNAKVAFCIHNIAYQGRFAIA-------DFSLLNLPDQFKRSFDF 290

Query: 607 ----DNSAHDR-INPVKGAVVFSNIVTTVSPTYA 635
               D     R IN +K  +  S+ V TVSP YA
Sbjct: 291 IDGYDKPVKGRKINWMKAGISESDRVVTVSPYYA 324