Jatropha Genome Database

JcCA0029051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0029051.10 + phase: 1 /partial
         (55 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006437 GTP-binding protein enga, putative                       82   7e-17

>30169.m006437 GTP-binding protein enga, putative
          Length = 624

 Score = 81.6 bits (200), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/40 (90%), Positives = 37/40 (92%)

Query: 1   FPETYRRYMEKQLRSDIGFSGTPIRLLWRSRRKMEKSEGQ 40
           FPETYRR+MEKQLRSD GFSGTPIRLLWRSRRKMEK  GQ
Sbjct: 585 FPETYRRFMEKQLRSDAGFSGTPIRLLWRSRRKMEKGGGQ 624