Jatropha Genome Database

JcCA0028741.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0028741.30 + phase: 0 
         (357 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006116 conserved hypothetical protein                          219   1e-57
29226.m000080 conserved hypothetical protein                          181   4e-46
29669.m000837 conserved hypothetical protein                           68   5e-12

>29908.m006116 conserved hypothetical protein
          Length = 224

 Score =  219 bits (559), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 101/202 (50%), Positives = 138/202 (68%)

Query: 2   KILCLHGFRTSGSFLQKQISKWDPSILAHFDLDFPNGIFPAGGKSDIDGIFPPPYFEWFQ 61
           + LCLHGFRTSG  L+KQI KW  S+L + DL F +  +PA GKS+++GIF PPY+EWFQ
Sbjct: 12  RFLCLHGFRTSGEILKKQIHKWPESLLQNLDLVFLDAPYPANGKSEVEGIFDPPYYEWFQ 71

Query: 62  YNQDFTEYTNLDKCISYLCEYITTKGPFDGLLGFSQGATLSALLLGYQLQGKVLKEHPPM 121
           +N +FTEYTN D+C++Y+ +++   GPFDGLLGFSQGA LSA L G Q  G  L + P +
Sbjct: 72  FNAEFTEYTNFDECLAYIEDFMIKNGPFDGLLGFSQGAILSAGLPGLQANGVALTKVPKI 131

Query: 122 KLFISISGTKFRDPSICDIAYKDIMKIKSVHFIGAKDWLRLPSEELATAFDSPLIIRHPQ 181
           K  I I G KFR PS+ + AY   ++  S+HF+G  D+LR    EL  +   P++I HP+
Sbjct: 132 KYLIIIGGAKFRAPSVAEKAYLSPIQCPSLHFLGEMDYLRPYGLELLESCVDPVVIHHPK 191

Query: 182 GHTVPRLDEAAIEQLRGWVAEI 203
           GHT+PRLDE +   +  ++  I
Sbjct: 192 GHTIPRLDEKSRAIMHSFIERI 213


>29226.m000080 conserved hypothetical protein
          Length = 287

 Score =  181 bits (460), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 128/204 (62%), Gaps = 5/204 (2%)

Query: 2   KILCLHGFRTSGSFLQKQISKWDPSILAHFDLDFPNGIFPAGGKSDIDGIFPPPYFEWFQ 61
           +ILC+H FRTS +  QK I +W  ++L    L F +G F A GKSD++ +F PPY+EW+Q
Sbjct: 75  RILCIHSFRTSAAIFQKMIERWPVTVLEKLQLHFLDGPFLARGKSDVELLFDPPYYEWYQ 134

Query: 62  YNQDFTEYTNLDKCISYLCEYITTKGPFDGLLGFSQGATLSALLLGYQLQGKVLKEHPPM 121
            ++DF  Y + ++C++Y+ EY+   GPFDGLLGFSQGA ++A + G Q QG    + P +
Sbjct: 135 SSEDFKVYEDFEECVAYIEEYMLKYGPFDGLLGFSQGAFITAAVPGMQAQGVAFTKVPKI 194

Query: 122 KLFISISGT-----KFRDPSICDIAYKDIMKIKSVHFIGAKDWLRLPSEELATAFDSPLI 176
           +  I ISG      KF  P +   AY   +   S+H IG KD+++    +L  +F  P++
Sbjct: 195 RFLIVISGAKFGGYKFGQPKLAGSAYSSPIDCPSLHIIGEKDFMKPGGIDLLGSFVDPVV 254

Query: 177 IRHPQGHTVPRLDEAAIEQLRGWV 200
           I HP+GH +PRLD+ +++ +  ++
Sbjct: 255 IHHPKGHIIPRLDDISLKTMLSFI 278


>29669.m000837 conserved hypothetical protein
          Length = 376

 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 30/40 (75%), Positives = 34/40 (85%)

Query: 148 IKSVHFIGAKDWLRLPSEELATAFDSPLIIRHPQGHTVPR 187
           +KSV+FIGAKDWL+LPSEELATAF SPLIIRHP     P+
Sbjct: 301 VKSVYFIGAKDWLKLPSEELATAFHSPLIIRHPPRAYYPK 340