Jatropha Genome Database

JcCA0028701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0028701.10 - phase: 0 
         (578 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30076.m004676 heat shock protein binding protein, putative            797   0.0  
30169.m006475 conserved hypothetical protein                           88   1e-17
28007.m000182 conserved hypothetical protein                           78   1e-14

>30076.m004676 heat shock protein binding protein, putative
          Length = 587

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/588 (71%), Positives = 445/588 (75%), Gaps = 11/588 (1%)

Query: 1   MATSPCLSGSEKKHWWLSNRKIVDKYIKDARNLIATQEQSDIVSALNLLDAALAVSPRFE 60
           MATSPC + +EKKHWWL+NRK+V KYIKDARNLIATQE  DI SALNLLDAALA+SPR E
Sbjct: 1   MATSPCSNATEKKHWWLTNRKVVYKYIKDARNLIATQEHGDIASALNLLDAALALSPRLE 60

Query: 61  VALELKARSLLYLRRFKDVADMLQDYIPSLKIXXXXXXXXXXXXXXXXX-----XXXXXX 115
           VALELKARSLLYLRRFKDVADMLQDYIPSLK+                            
Sbjct: 61  VALELKARSLLYLRRFKDVADMLQDYIPSLKMGNNNNSDDSGSVSSDSSSSSSSQQLSRE 120

Query: 116 XXKLLXXXXXXXXXXXXXX-XFKCFSVSDLKKKVMAGLCKNCEKEGQWRYLVLGQACCHL 174
             KLL                FKCFSVSDLKKKVMAGLCKNC+KEGQWRYL+LGQACCHL
Sbjct: 121 RVKLLTSDSSSSADSEDKDPTFKCFSVSDLKKKVMAGLCKNCDKEGQWRYLILGQACCHL 180

Query: 175 GLMEDAMALLQTGKRLSTAAFRREXXXXXXXXXXXXNFPISGDISTSSAPPTPPRNLSDT 234
           GLMEDAM LLQTGKRL+TAAFRRE            NFP+S DISTSSAPPTPPR LS++
Sbjct: 181 GLMEDAMVLLQTGKRLTTAAFRRESISWSDDSFSISNFPLSSDISTSSAPPTPPRTLSES 240

Query: 235 ESISQLLSHIKXXXXXXXXXXXXXXXXXYSEAIRHFTKIVEGRRGAPQGFLAECYMHRAF 294
           ESISQLLSHIK                 Y+EAIRHF+KIVEGRRGAPQGFLAECYMHRAF
Sbjct: 241 ESISQLLSHIKLLLRRRAAAIAALDAGLYAEAIRHFSKIVEGRRGAPQGFLAECYMHRAF 300

Query: 295 AYKSSGRIAEAIADCNKNLALDPTCIQALETRASLLETIRCLPDCLHDLEHLKLLYNSIL 354
           AYK+SGRIAE+IADCNK LALDPTCIQALETRASLLETIRCLPDCLHDLEHLKLLYNSIL
Sbjct: 301 AYKASGRIAESIADCNKTLALDPTCIQALETRASLLETIRCLPDCLHDLEHLKLLYNSIL 360

Query: 355 RDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKLRVASGETGNVDYYALIGLRRGCSR 414
           RDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELK RVASGETGNVDYYALIGLRRGCSR
Sbjct: 361 RDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKQRVASGETGNVDYYALIGLRRGCSR 420

Query: 415 SELERAHLLLCLRHKPDKAINFVERCEFADDRDLDSVKDRAKMSALLLYRLLQKGYTSVM 474
           SELERAHLLL LRHKPDKA NF+ERCEFADDRDLDSVKDRAKMSALLLYRLLQKGY+S+M
Sbjct: 421 SELERAHLLLVLRHKPDKATNFMERCEFADDRDLDSVKDRAKMSALLLYRLLQKGYSSLM 480

Query: 475 ATIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTKPESNQSTMEKSGPNRISSTE--- 531
           ATIM                                 P    S +EKS   RI+S E   
Sbjct: 481 ATIMDEEAAEKQRKKAAAALQAAQAAIQVQQRTTQN-PRPESSKVEKSSSQRINSNENKP 539

Query: 532 -IAVTSSGTTNSSVFQGVFCRDLAAVGNLLSQVGFNRPIPVKYEALSC 578
               T SGTTN SVFQGVFCRDLA VGNLLSQ GFNRP+PVKYEAL C
Sbjct: 540 AAVKTPSGTTNQSVFQGVFCRDLATVGNLLSQAGFNRPVPVKYEALRC 587


>30169.m006475 conserved hypothetical protein
          Length = 1338

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 27/218 (12%)

Query: 263  YSEAIRHFTKI----VEGRRGAPQGFLAECYMHRAFAYKSSGRIAEAIADCNKNLALDPT 318
            +SEAI ++T      VE R      F A CY +RA AYK+ G + +AIADC+  +ALD  
Sbjct: 1078 HSEAIEYYTAALSCNVESRP-----FAAICYCNRAAAYKALGLVTDAIADCSLAIALDKN 1132

Query: 319  CIQALETRASLLETIRCLPDCLHDLEHL-KLLYNSILRDRKLPGPAWKRHNVRYREIPGK 377
             ++A+  RA+L E IR     + DL+ L  +L   +     L G + +  N         
Sbjct: 1133 YLKAISRRATLYEMIRDYGQAVSDLQRLVAVLTKQVEEKTSLSGSSDRSGN--------- 1183

Query: 378  LCALTTKIQELKLRVASGETGN-----VDYYALIGLRRGCSRSELERAHLLLCLRHKPDK 432
               L   +++ ++R+++ E        +D Y ++G+    S S++++A+    LRH PDK
Sbjct: 1184 ---LANDLRQARMRLSTIEEAARKEIPLDMYRILGVEPSASASDIKKAYRKAALRHHPDK 1240

Query: 433  AINFVERCEFADDRDLDSVKDRAKMSALLLYRLLQKGY 470
            A   + R E  DD     + +   M A  L++++ + Y
Sbjct: 1241 AGQSLARIENGDDWLRKEIGEEIHMHADRLFKMIGEAY 1278


>28007.m000182 conserved hypothetical protein
          Length = 1489

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 110/215 (51%), Gaps = 20/215 (9%)

Query: 263  YSEAIRHFTKIVEGRRGAPQGFLAECYMHRAFAYKSSGRIAEAIADCNKNLALDPTCIQA 322
            Y+EA+ H+T  +     + + F A C+ +RA A+++  +IA+AIADC+  +ALD    +A
Sbjct: 1222 YTEALEHYTAAISSNIES-RPFAAICFCNRAAAHQALSQIADAIADCSLAIALDGNYSKA 1280

Query: 323  LETRASLLETIRCLPDCLHDLEHL-KLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCAL 381
            +  RA+L E IR       DL+ L  +L N+   D K           R    P K  + 
Sbjct: 1281 VARRATLHEMIRDFGQAASDLQRLISVLENT--SDGK----------GRQSATPSKSISS 1328

Query: 382  TTKIQELKLRVASGETGN-----VDYYALIGLRRGCSRSELERAHLLLCLRHKPDKAINF 436
            T ++++   R++  E        +D Y ++G+++  S +++++A+    LRH PDKA  F
Sbjct: 1329 TKELRQAHRRLSLMEEEAKKGIPLDLYLILGVKQSDSAADIKKAYRKAALRHHPDKAGQF 1388

Query: 437  VERCEFADDRDL-DSVKDRAKMSALLLYRLLQKGY 470
            + R E  ++  L   +     M A  L++++ + Y
Sbjct: 1389 LARSESGEEGRLWKDIVQEVHMDADRLFKMIGEAY 1423