Jatropha Genome Database

JcCA0028391.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0028391.10 + phase: 0 
         (77 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006133 Low-molecular-weight cysteine-rich protein LCR69 p...    75   5e-15
30225.m001709 8.4 kDa sulfur-rich protein precursor, putative          73   3e-14

>29908.m006133 Low-molecular-weight cysteine-rich protein LCR69
          precursor, putative
          Length = 77

 Score = 75.5 bits (184), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/77 (67%), Positives = 56/77 (72%)

Query: 1  MKCPMRLFSTXXXXXXXXXATETGPMVAEARTCESLSHRFKGICVRNSNCAAICQTEGFQ 60
          MK PMRLFST         ATE G  VAEARTCES SH+FKG C+  +NCA IC+TEGF 
Sbjct: 1  MKHPMRLFSTVFLLLLLLVATEMGAKVAEARTCESQSHKFKGTCLSTTNCANICKTEGFH 60

Query: 61 GGHCRGLRRRCFCTKHC 77
          GG CRG RRRCFCTKHC
Sbjct: 61 GGRCRGFRRRCFCTKHC 77


>30225.m001709 8.4 kDa sulfur-rich protein precursor, putative
          Length = 74

 Score = 73.2 bits (178), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 33/58 (56%), Positives = 42/58 (72%)

Query: 20 ATETGPMVAEARTCESLSHRFKGICVRNSNCAAICQTEGFQGGHCRGLRRRCFCTKHC 77
          A++   +  EAR CES SH FKG C+R+ NCA +C+ E F GG C+G+RRRCFCTK C
Sbjct: 17 ASQEAIVPTEARVCESQSHYFKGPCLRDHNCAMVCRNEAFSGGRCKGVRRRCFCTKLC 74