Jatropha Genome Database

JcCA0028161.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0028161.10 - phase: 0 /partial
         (527 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29269.m000247 conserved hypothetical protein                          829   0.0  

>29269.m000247 conserved hypothetical protein
          Length = 570

 Score =  829 bits (2141), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/527 (77%), Positives = 447/527 (84%)

Query: 1   MQTPDDIRNLPIDITFSRLGEWLVDRKRVPADWRKRIAAVRARISKEFSSLPKDIDPYFQ 60
           MQ  +DIRNLPIDIT SRLGEWLVDRKR+P+DWRKRIAA+RARISKE SSLPKDIDPY Q
Sbjct: 1   MQGQEDIRNLPIDITSSRLGEWLVDRKRIPSDWRKRIAAIRARISKELSSLPKDIDPYIQ 60

Query: 61  TLDPEGIGYLEAKKIYDVLVKKTPESRNIFGRLSGAAGAWEAIVHSFEKDYIYLGEAAQI 120
           TL+PEGIGYLEAKKIYD LVK TPESRNIFGRLSGAAGAWEAIV SFEKD+IYLGEAAQI
Sbjct: 61  TLEPEGIGYLEAKKIYDTLVKTTPESRNIFGRLSGAAGAWEAIVRSFEKDHIYLGEAAQI 120

Query: 121 IIQNVNYEIPYXXXXXXXXXXXLAELERKEADIKRSASLSAAKYIEACQELGLQGNNVRS 180
           IIQNV YEIPY           LAELERKE DIKRSASLSAAKY+EACQELGLQGNNVRS
Sbjct: 121 IIQNVTYEIPYQKKQVQKIQQQLAELERKETDIKRSASLSAAKYMEACQELGLQGNNVRS 180

Query: 181 ELLETAKSLPGTFSRILEVINSDSLLRAIEYYSTFVKDVHTEKDKSSWTILLNLKDIREN 240
           ELLETAKSLP TF++ILEVINSDS+L+AIE+YSTFV+DVHTEKDKSSW +L NL++IREN
Sbjct: 181 ELLETAKSLPSTFNQILEVINSDSMLKAIEFYSTFVRDVHTEKDKSSWIVLWNLREIREN 240

Query: 241 PPSLNVSAGPEILDAANVQLSFDESSHVRGXXXXXXXXXXXXXXXXXAQIDWDIGVVEET 300
           PP+LNVSAGPEILD  N+QLS +E+SHVRG                  QIDWDIG  EE 
Sbjct: 241 PPTLNVSAGPEILDIMNLQLSHNETSHVRGDMDVTADNIDWDISVDSTQIDWDIGATEEI 300

Query: 301 DDGGNGLGPYEIVNASDILQSSSQNEAVESERTPLNKGEDSLHPEVSVSEISWDISVETP 360
           DDG NGLGPYEIVNASDILQSSSQNEAVES+    +KGED+LHPE+SVSEISWDISVE P
Sbjct: 301 DDGSNGLGPYEIVNASDILQSSSQNEAVESDLNSSSKGEDNLHPEISVSEISWDISVEPP 360

Query: 361 QVDVIDDVNLLNGSLENPTFVPDSLMHNAGVKEERSQLLETEYRNKLLDDLYEIKAFLSQ 420
           Q+DV+DDV+  N  LEN  +VPDSL HN+GVKEERSQLL TEYRNKLLDDL+E+KAFL+Q
Sbjct: 361 QIDVVDDVDSPNTGLENQKYVPDSLTHNSGVKEERSQLLGTEYRNKLLDDLHEMKAFLNQ 420

Query: 421 RLTELRNEETLSLQHQVQSVAPLVVQQYTPDAIETMLSDVFLVISLLTNRKTRDLIMILN 480
           RL ELRNEETLSLQHQVQSV+PLV+QQY PDAIETMLSDVFLVISLLTNRKTRDLIMILN
Sbjct: 421 RLAELRNEETLSLQHQVQSVSPLVLQQYAPDAIETMLSDVFLVISLLTNRKTRDLIMILN 480

Query: 481 SRRFLDRLVSSXXXXXXXXXXXXXXXXDLAAKRMELHNSLSSSWPKQ 527
           S+RFLDRLV++                DLAAKRMELHNSLSSSWPKQ
Sbjct: 481 SKRFLDRLVNTLEEKKHHELKLKEGLKDLAAKRMELHNSLSSSWPKQ 527