Jatropha Genome Database

JcCA0022221.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0022221.30 + phase: 0 
         (296 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30180.m001026 cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidyltrans...   458   e-129
28601.m000065 cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidyltrans...   450   e-127

>30180.m001026 cmp-2-keto-3-deoctulosonate (cmp-kdo)
           cytidyltransferase, putative
          Length = 294

 Score =  458 bits (1179), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 220/256 (85%), Positives = 229/256 (89%)

Query: 40  YLARSRNFRSRVVGIIPARFASSRFQGKPLVQILGKPMIQRTWERAKLATTLDHIVVATD 99
           YL+RSR FRSRV+GIIPARFASSRFQGKPLVQILGKPMIQRTWERAKLATTLDHI+VATD
Sbjct: 38  YLSRSRKFRSRVIGIIPARFASSRFQGKPLVQILGKPMIQRTWERAKLATTLDHIIVATD 97

Query: 100 DEKIAECCRGFGADVIMTSESCRNGTERCNEALGKLEKKYDVVVNIQGDEPLIEPEIIDG 159
           DEKIAECCRGFGADVIMTSESCRNGTERCNEA+GKLEKKYDVVVNIQGDEPLIEPEIIDG
Sbjct: 98  DEKIAECCRGFGADVIMTSESCRNGTERCNEAIGKLEKKYDVVVNIQGDEPLIEPEIIDG 157

Query: 160 IVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNRGYAIYFSRGLIPYNKSGKVNQQ 219
           IVKALQ APDAVFSTAVTSLKPEDAFDPNRVKCVVDN+GYAIYFSRGLIPYNKSGK+N Q
Sbjct: 158 IVKALQEAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNQGYAIYFSRGLIPYNKSGKINPQ 217

Query: 220 FPYLLHLGIQSYDAKFLKIYXXXXXXXXXXXXXXXXXXXXXNGYKMKVMKVDHEAHGVDT 279
           FPYLLHLGIQSYDAKFLKIY                     NGYKMKV+KVDHEAHGVD 
Sbjct: 218 FPYLLHLGIQSYDAKFLKIYPELQPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 277

Query: 280 PDDVEKIETLMRERNL 295
           P+DVEKIE LMRE N+
Sbjct: 278 PEDVEKIERLMREHNV 293


>28601.m000065 cmp-2-keto-3-deoctulosonate (cmp-kdo)
           cytidyltransferase, putative
          Length = 290

 Score =  450 bits (1157), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 216/256 (84%), Positives = 226/256 (88%)

Query: 40  YLARSRNFRSRVVGIIPARFASSRFQGKPLVQILGKPMIQRTWERAKLATTLDHIVVATD 99
           YL R R FR RV+GIIPARF SSRFQGKPLV ILGKPMIQRTWERAKLATTLDHI+VATD
Sbjct: 34  YLGRFRKFRRRVIGIIPARFDSSRFQGKPLVHILGKPMIQRTWERAKLATTLDHIIVATD 93

Query: 100 DEKIAECCRGFGADVIMTSESCRNGTERCNEALGKLEKKYDVVVNIQGDEPLIEPEIIDG 159
           +EKIAECCRGFGADVIMTSESCRNGTERCNEALGKLEKKYDVVVNIQGDEPLIEP IIDG
Sbjct: 94  NEKIAECCRGFGADVIMTSESCRNGTERCNEALGKLEKKYDVVVNIQGDEPLIEPVIIDG 153

Query: 160 IVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNRGYAIYFSRGLIPYNKSGKVNQQ 219
           IVKALQAAP+AVFSTAVTSLKPEDAFDPNRVKCVVDN+GYAIYFSRGL+PYNKSGKVN Q
Sbjct: 154 IVKALQAAPNAVFSTAVTSLKPEDAFDPNRVKCVVDNQGYAIYFSRGLVPYNKSGKVNAQ 213

Query: 220 FPYLLHLGIQSYDAKFLKIYXXXXXXXXXXXXXXXXXXXXXNGYKMKVMKVDHEAHGVDT 279
           FPYLLHLGIQSYDAKFLKIY                     NGYKMKV+KVDHEAHGVDT
Sbjct: 214 FPYLLHLGIQSYDAKFLKIYSELQPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDT 273

Query: 280 PDDVEKIETLMRERNL 295
           P+D+EKIE LMRERN+
Sbjct: 274 PEDIEKIERLMRERNV 289