Jatropha Genome Database

JcCA0022141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0022141.10 + phase: 0 
         (108 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29596.m000699 mads box protein, putative                              112   3e-26
29804.m001536 mads box protein, putative                              110   1e-25
29648.m001978 mads box protein, putative                               95   7e-21
30174.m008934 mads box protein, putative                               93   2e-20
30221.m002218 mads box protein, putative                               91   1e-19
30147.m014133 mads box protein, putative                               91   1e-19
29907.m000663 mads box protein, putative                               88   1e-18
30138.m003939 mads box protein, putative                               87   1e-18
29838.m001690 mads box protein, putative                               86   4e-18
29908.m005982 mads box protein, putative                               84   2e-17
29782.m000119 Floral homeotic protein DEFICIENS, putative              83   3e-17
30170.m013776 mads box protein, putative                               80   1e-16
30138.m004061 mads box protein, putative                               72   8e-14
29693.m002042 mads box protein, putative                               71   1e-13
29693.m002039 mads box protein, putative                               71   1e-13
29813.m001508 mads box protein, putative                               68   1e-12
28348.m000077 mads box protein, putative                               64   1e-11
30099.m001671 mads box protein, putative                               64   2e-11
30099.m001672 mads box protein, putative                               64   2e-11
29613.m000367 mads box protein, putative                               64   2e-11
29739.m003627 mads box protein, putative                               64   2e-11
29693.m002041 mads box protein, putative                               64   2e-11
29912.m005524 mads box protein, putative                               63   4e-11
28830.m000229 mads box protein, putative                               61   1e-10
27866.m000233 mads box protein, putative                               60   2e-10
29838.m001672 mads box protein, putative                               57   2e-09
28180.m000391 mads box protein, putative                               51   1e-07
30190.m010925 conserved hypothetical protein                           49   4e-07
27893.m000228 mads box protein, putative                               48   1e-06
29653.m000299 mads box protein, putative                               48   1e-06

>29596.m000699 mads box protein, putative
          Length = 262

 Score =  112 bits (281), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 52/60 (86%), Positives = 59/60 (98%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANT 60
          MGRGKIVIRRIDNSTSRQVTFSKRR GL+KKAKELAILCDAEVG+VIFSS+GKLY+F+++
Sbjct: 1  MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVVIFSSTGKLYDFSSS 60


>29804.m001536 mads box protein, putative
          Length = 266

 Score =  110 bits (275), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/106 (55%), Positives = 75/106 (70%), Gaps = 7/106 (6%)

Query: 1   MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANT 60
           MGRGKIVIRRIDNSTSRQVTFSKRR GL+KKA+EL+ILCDAEVG++IFSS+ KLY++A+T
Sbjct: 28  MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGVIIFSSTSKLYDYAST 87

Query: 61  RFDIYQYKFSFIC-YMKLLLKSSYLFGKFSKFYTFRIFTSSCKKLL 105
             +      S I  Y KL  +   L    S+   ++   +S +K L
Sbjct: 88  SMN------SVIERYNKLKEEQQQLMNPASEIKFWQREAASLRKEL 127


>29648.m001978 mads box protein, putative
          Length = 234

 Score = 94.7 bits (234), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 53/57 (92%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEF 57
          MGRG+I I+RI+NS++RQVT+SKRR G+IKKAKE+ +LCDAEV L+IF+SSGK++E+
Sbjct: 1  MGRGRIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAEVSLIIFASSGKMHEY 57


>30174.m008934 mads box protein, putative
          Length = 244

 Score = 93.2 bits (230), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 51/60 (85%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANT 60
          MGRG++ ++RI+N  +RQVTFSKRR GL+KKA EL++LCDAEV L+IFSS GKLYEF N 
Sbjct: 1  MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGNA 60


>30221.m002218 mads box protein, putative
          Length = 233

 Score = 90.9 bits (224), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 39/66 (59%), Positives = 53/66 (80%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANT 60
          MGRGKI I+RI+N T+RQVTFSKRR GL+KK  EL++LCDA++GL+IFSS+GK+ ++   
Sbjct: 1  MGRGKIPIKRIENQTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKMCQYCTE 60

Query: 61 RFDIYQ 66
             + Q
Sbjct: 61 PLRMEQ 66


>30147.m014133 mads box protein, putative
          Length = 213

 Score = 90.9 bits (224), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 41/63 (65%), Positives = 51/63 (80%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANT 60
          M RGKI +RRI+N+TSRQVTFSKRR GL+KKA EL++LCDAEV ++IFS  G+L EFA+ 
Sbjct: 1  MVRGKIQMRRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLSEFASN 60

Query: 61 RFD 63
             
Sbjct: 61 EMQ 63


>29907.m000663 mads box protein, putative
          Length = 205

 Score = 87.8 bits (216), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 38/58 (65%), Positives = 48/58 (82%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFA 58
          M RGK+ ++RI+N   RQVTF KRR GL+KKAKEL++LCDAE+GL IFS+ GKLY+ A
Sbjct: 1  MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGLFIFSAHGKLYDLA 58


>30138.m003939 mads box protein, putative
          Length = 244

 Score = 87.4 bits (215), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 35/58 (60%), Positives = 51/58 (87%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFA 58
          MGRG++ ++RI+N  +RQVTFSKRR GL+KKA E+++LCDAEV L++FS+ GKL+E++
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSTKGKLFEYS 58


>29838.m001690 mads box protein, putative
          Length = 61

 Score = 85.9 bits (211), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 53/61 (86%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANT 60
          M R KI I++IDN T+RQVTFSKRR+GL KKA EL+ LCDAE+ L++FS++GKL+E+A++
Sbjct: 1  MTRQKIQIKKIDNITARQVTFSKRRRGLFKKAYELSTLCDAEIALLVFSATGKLFEYASS 60

Query: 61 R 61
          R
Sbjct: 61 R 61


>29908.m005982 mads box protein, putative
          Length = 347

 Score = 83.6 bits (205), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/61 (60%), Positives = 50/61 (81%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANT 60
          MGR K+ I+RI+N+T+RQVTFSKRR GLIKKA EL+ILCD ++ L++FS SG+L  F+  
Sbjct: 1  MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHFSGR 60

Query: 61 R 61
          +
Sbjct: 61 K 61


>29782.m000119 Floral homeotic protein DEFICIENS, putative
          Length = 235

 Score = 82.8 bits (203), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 7/73 (9%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSG-KLYEFAN 59
          MGRGKI I++I+N T+RQVT+SKRR G+ KKA+EL +LCDA+V L++FS+SG K +EF +
Sbjct: 1  MGRGKIEIKKIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNSGRKFHEFIS 60

Query: 60 TR------FDIYQ 66
                  FD YQ
Sbjct: 61 PGTTTKKIFDQYQ 73


>30170.m013776 mads box protein, putative
          Length = 230

 Score = 80.5 bits (197), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 37/58 (63%), Positives = 49/58 (84%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFA 58
          MGR K+ I+RI+N+T+RQVTFSKRR GLIKKA EL++LCD +V L++FS SG+L  F+
Sbjct: 1  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRLSLFS 58


>30138.m004061 mads box protein, putative
          Length = 363

 Score = 71.6 bits (174), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/53 (56%), Positives = 46/53 (86%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGK 53
          MGR K+ I+R++++++RQVT+SKRR G++KKAKEL+ILCD  + L++FS +GK
Sbjct: 1  MGRVKLKIKRLESTSNRQVTYSKRRNGILKKAKELSILCDIHIVLLMFSPTGK 53


>29693.m002042 mads box protein, putative
          Length = 220

 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 45/68 (66%)

Query: 2  GRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANTR 61
          GR KI ++RI+N   R +TFSKRR G+ KKA EL  LC AEVG+++FS +GK + F +  
Sbjct: 9  GRQKITMKRIENEEDRLITFSKRRSGIYKKASELITLCGAEVGILVFSPAGKPFSFGHPS 68

Query: 62 FDIYQYKF 69
           +    +F
Sbjct: 69 LESIANRF 76


>29693.m002039 mads box protein, putative
          Length = 172

 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 44/60 (73%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANT 60
          MGR KI ++ + +++SRQVTFSKRR GL KKA ELA LC A++ +V+FS  GK + F + 
Sbjct: 1  MGRRKIEMKMVKDTSSRQVTFSKRRTGLFKKANELATLCAAQIAIVVFSPGGKPFSFGHP 60


>29813.m001508 mads box protein, putative
          Length = 360

 Score = 67.8 bits (164), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/53 (52%), Positives = 43/53 (81%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGK 53
          MGR K+ I++++N+  RQ T+ KR+ G+IKKAKEL+ILCD ++ L++FS +GK
Sbjct: 1  MGRVKLKIKKLENTNGRQATYGKRKHGIIKKAKELSILCDIDIILLMFSPTGK 53


>28348.m000077 mads box protein, putative
          Length = 215

 Score = 64.3 bits (155), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 42/62 (67%)

Query: 2  GRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANTR 61
          GR KI I++++N   R VTFSKR+ G+ KKA EL+ LC AE+ +V+FS  GK++   N  
Sbjct: 17 GRQKIEIKKLENVNRRYVTFSKRKHGIFKKATELSTLCGAEIAVVLFSGHGKVFSCGNPD 76

Query: 62 FD 63
           D
Sbjct: 77 VD 78


>30099.m001671 mads box protein, putative
          Length = 226

 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 39/63 (61%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANT 60
          +GR KI I +I   T  QVTFSKRR GL KKA EL  LC  E+ +++FS + K + F + 
Sbjct: 26 LGRQKIAIEKISKKTHLQVTFSKRRAGLFKKASELCTLCGVEIAILVFSPANKAFSFGHP 85

Query: 61 RFD 63
            +
Sbjct: 86 EVE 88


>30099.m001672 mads box protein, putative
          Length = 217

 Score = 63.5 bits (153), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 43/63 (68%)

Query: 2  GRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANTR 61
          GR KI + ++ N ++ QVTFSKRR GL KKA EL+ LC AE+ +++FS   K++ F +  
Sbjct: 7  GRQKIDMVKMPNESNLQVTFSKRRSGLFKKASELSTLCGAEIAIIVFSPGKKVFSFGHPG 66

Query: 62 FDI 64
           ++
Sbjct: 67 VEV 69


>29613.m000367 mads box protein, putative
          Length = 183

 Score = 63.5 bits (153), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 39/60 (65%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANT 60
          +GR KI I +I   +  QVTFSKRR GL KKA EL  LC  E+ +++FS +GK + F + 
Sbjct: 6  LGRQKIAIEKISKKSHLQVTFSKRRAGLFKKASELCTLCGVEIAIIVFSPAGKAFSFGHP 65


>29739.m003627 mads box protein, putative
          Length = 62

 Score = 63.5 bits (153), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 42/53 (79%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGK 53
          MGR K+ I R+++  +RQV +SKR+ G++KK KELA LCD ++GL++FS SGK
Sbjct: 1  MGRRKLKILRLESVKARQVKYSKRKLGVLKKGKELATLCDVDLGLIMFSPSGK 53


>29693.m002041 mads box protein, putative
          Length = 239

 Score = 63.5 bits (153), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 43/68 (63%)

Query: 2  GRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANTR 61
          GR KI +++I+N   R +TFSKRR G+ KKA EL  L  AE+  +++S +GK + FA+  
Sbjct: 12 GRQKIEMKKIENEDDRLITFSKRRSGIYKKASELVTLTGAELAFLVYSPAGKPFSFAHPS 71

Query: 62 FDIYQYKF 69
           D    +F
Sbjct: 72 MDAITNRF 79


>29912.m005524 mads box protein, putative
          Length = 338

 Score = 62.8 bits (151), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 5/64 (7%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANT 60
          MGRGK+ +  I N  SR +T+ KR+KGL KK +E  ILCD +  ++IFS      +F N 
Sbjct: 1  MGRGKLNMELISNEKSRMITYHKRKKGLTKKVQEFHILCDVDACIIIFSP-----KFNNR 55

Query: 61 RFDI 64
           FDI
Sbjct: 56 SFDI 59


>28830.m000229 mads box protein, putative
          Length = 197

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 41/70 (58%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANT 60
          MGR K  +  I   ++RQV+FSKRR G+ KKA EL  LC  E  +VIFS  GK + F + 
Sbjct: 1  MGRKKTQMSLIQGESARQVSFSKRRTGIFKKASELCTLCAVEAAVVIFSPGGKAFTFGHP 60

Query: 61 RFDIYQYKFS 70
           F+    K +
Sbjct: 61 CFEAIMKKLA 70


>27866.m000233 mads box protein, putative
          Length = 217

 Score = 60.1 bits (144), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 42/62 (67%)

Query: 2  GRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANTR 61
          GR KI I+ I+  ++ QVTFSKRR GL KKA EL++LC A+V ++ FS   K++ F +  
Sbjct: 13 GRQKIEIKPIEGKSNLQVTFSKRRAGLFKKASELSLLCGAQVAVLAFSPGKKVFAFGHPN 72

Query: 62 FD 63
           +
Sbjct: 73 VE 74


>29838.m001672 mads box protein, putative
          Length = 207

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 40/62 (64%)

Query: 2  GRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGKLYEFANTR 61
          GR +I + +I   ++R VTFSKRR G+ KKA EL+ LC AE+ +++FS   + + F N  
Sbjct: 8  GRQRIEMVKISKESNRLVTFSKRRYGVFKKASELSTLCGAEISIIVFSPGKRAFSFGNPS 67

Query: 62 FD 63
           +
Sbjct: 68 VE 69


>28180.m000391 mads box protein, putative
          Length = 328

 Score = 50.8 bits (120), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 5  KIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSS-SGKLYEFANTRFD 63
          K+ +++ +    R V+F+KRR GL  KA EL +LCDA++ L++ S  S K+Y F +   D
Sbjct: 6  KLPMKKRETKKQRSVSFTKRRYGLFNKAAELFMLCDAQLALLVSSPCSRKVYSFGHPSVD 65

Query: 64 I 64
          +
Sbjct: 66 V 66


>30190.m010925 conserved hypothetical protein
          Length = 386

 Score = 49.3 bits (116), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/53 (39%), Positives = 33/53 (62%)

Query: 1  MGRGKIVIRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSGK 53
          MG  +I +  I+  ++R +T+ KR+K L+KK  E +ILC  E  L+IF+   K
Sbjct: 1  MGHSRIKMELIEKESTRMLTYQKRKKSLVKKVSEFSILCGVEACLIIFAPKHK 53


>27893.m000228 mads box protein, putative
          Length = 349

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 4/61 (6%)

Query: 8  IRRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSSG----KLYEFANTRFD 63
          ++++++   R V+F+KRR GL  KA EL +LCDA++ +++ S       K+Y F +   D
Sbjct: 9  MKKLESQKQRSVSFTKRRNGLFNKAAELFMLCDAQLAVLVASPCSKPKRKVYSFGHPSAD 68

Query: 64 I 64
          +
Sbjct: 69 V 69


>29653.m000299 mads box protein, putative
          Length = 166

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 36/62 (58%), Gaps = 3/62 (4%)

Query: 5  KIVIRRI-DNSTSRQVTFSKRRKGLIKKAKELAIL--CDAEVGLVIFSSSGKLYEFANTR 61
          KI I++I DN T   VTFSKRR GL KKA E   L    AEV L+ FS SG+ + F    
Sbjct: 29 KIEIKKIQDNKTGLIVTFSKRRTGLFKKAMEFCNLDGGGAEVALITFSPSGRPFSFGKPS 88

Query: 62 FD 63
           D
Sbjct: 89 PD 90