Jatropha Genome Database

JcCA0020601.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0020601.30 - phase: 0 /partial
         (149 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29843.m000285 conserved hypothetical protein                          251   7e-68
30073.m002201 Ethanolamine-phosphate cytidylyltransferase, putative   182   5e-47
27704.m000147 cholinephosphate cytidylyltransferase, putative          75   1e-14

>29843.m000285 conserved hypothetical protein
          Length = 387

 Score =  251 bits (642), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 120/129 (93%), Positives = 125/129 (96%)

Query: 1   ILRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVS 60
           ILR ARQLGDFLLVGIHTDQIVSEHRG++YPIMHLHERSLSVLACRYVDEVIIGAPWEVS
Sbjct: 239 ILRSARQLGDFLLVGIHTDQIVSEHRGEHYPIMHLHERSLSVLACRYVDEVIIGAPWEVS 298

Query: 61  KDMITTFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQRIVA 120
           KDMITTFNISLVVHGT+AECNSLLAGI DPYAVPKSMGIF+ LESPKNI T+SVAQRIVA
Sbjct: 299 KDMITTFNISLVVHGTVAECNSLLAGISDPYAVPKSMGIFRTLESPKNIITSSVAQRIVA 358

Query: 121 NHEAYMKRN 129
           NHEAYMKRN
Sbjct: 359 NHEAYMKRN 367



 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 72/127 (56%), Gaps = 9/127 (7%)

Query: 2   LRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVSK 61
           LR A+ LGD L+VG+ +D+ +  ++G   P++ + ER   V   ++VDEVI  AP+ +++
Sbjct: 49  LRQAKALGDELVVGVVSDEEIIANKGP--PVLPMEERLALVSGLKWVDEVIANAPYAITE 106

Query: 62  DMITT-FN---ISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQR 117
             +   FN   I  ++HG   +   LL    D YA+ K  G ++ ++  + +++T +  R
Sbjct: 107 QFMNRLFNEHKIDYIIHG---DDPCLLPDGTDAYALAKRAGRYKQIKRTEGVSSTDIVGR 163

Query: 118 IVANHEA 124
           I+  ++A
Sbjct: 164 ILFANDA 170


>30073.m002201 Ethanolamine-phosphate cytidylyltransferase, putative
          Length = 418

 Score =  182 bits (462), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 97/129 (75%), Positives = 106/129 (82%)

Query: 1   ILRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVS 60
           ILR AR LGDFLLVGIH DQ VS  RG + PIM+LHERSLSVLACRYVDEVIIGAPWEVS
Sbjct: 270 ILRVARGLGDFLLVGIHNDQTVSARRGAHRPIMNLHERSLSVLACRYVDEVIIGAPWEVS 329

Query: 61  KDMITTFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQRIVA 120
           KDMITTFNI LVVHGT+AE         +PY VP SMGIFQ+LESP +ITTT++ +RIVA
Sbjct: 330 KDMITTFNIFLVVHGTVAENTDYQEEKSNPYDVPISMGIFQVLESPLDITTTTIIRRIVA 389

Query: 121 NHEAYMKRN 129
           NHEAY KRN
Sbjct: 390 NHEAYQKRN 398



 Score = 67.0 bits (162), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 9/122 (7%)

Query: 2   LRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPW---- 57
           LR AR LGD L+VG+ +D  +  ++G   P+  LHER + V A ++VDEVI  AP+    
Sbjct: 74  LRQARALGDELVVGVVSDAEIIANKGP--PVTPLHERMIMVNAVKWVDEVIPDAPYAITE 131

Query: 58  EVSKDMITTFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQR 117
           E  K +   +NI  ++HG   +   +L    D YA+ K  G ++ ++  + +++T +  R
Sbjct: 132 EFMKKLFEEYNIDYIIHG---DDPCVLPDGTDAYALAKKAGRYKQIKRTEGVSSTDIVGR 188

Query: 118 IV 119
           ++
Sbjct: 189 ML 190


>27704.m000147 cholinephosphate cytidylyltransferase, putative
          Length = 298

 Score = 74.7 bits (182), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 3/119 (2%)

Query: 11  FLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVSKDMITTFNIS 70
           +LLVG   D+I  +++GK   +M+  ER  S+  C++VDEVI  APW ++++ +    I 
Sbjct: 47  YLLVGCCNDEITHKYKGKT--VMNDQERYESLRHCKWVDEVIPDAPWVLTQEFLDKHRID 104

Query: 71  LVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQRIVANHEAYMKRN 129
            V H ++   ++  AG  D Y   KS+G F+  +  + I+T+ +  RIV ++  Y+ RN
Sbjct: 105 YVAHDSLPYADASGAG-NDVYEFVKSIGKFKETKRTEGISTSDIIMRIVKDYNEYVMRN 162