Jatropha Genome Database

JcCA0020601.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0020601.10 - phase: 0 /partial
         (78 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30162.m001270 galactokinase, putative                                 112   4e-26

>30162.m001270 galactokinase, putative
          Length = 431

 Score =  112 bits (279), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 59/64 (92%), Gaps = 1/64 (1%)

Query: 16 QLNRIRKVVSAMA-GRSPEEVRVVVSPYRICPLGAHIDHQGGTVSAMTINRGILLGFIPS 74
          +LN IR+VVSAM+ G SPE+VRVVVSPYRICPLGAHIDHQGG VSAMTIN+G+LLGF+PS
Sbjct: 13 ELNEIREVVSAMSSGTSPEQVRVVVSPYRICPLGAHIDHQGGIVSAMTINKGVLLGFVPS 72

Query: 75 GDTK 78
          GD +
Sbjct: 73 GDPQ 76