Jatropha Genome Database

JcCA0020521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0020521.10 + phase: 0 
         (339 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004507 leucine zipper-ef-hand containing transmembrane pr...   488   e-138
29678.m000507 leucine zipper-ef-hand containing transmembrane pr...   231   3e-61

>29929.m004507 leucine zipper-ef-hand containing transmembrane
           protein, putative
          Length = 758

 Score =  488 bits (1256), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 256/328 (78%), Positives = 261/328 (79%)

Query: 1   MIQAEGVESLSETELHQACRERGLLGLLSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAF 60
           MIQAEGVESLSETEL QACRERGLLGLLSVEEMR QLRDWLDLSLNHSVPSSLLILSRAF
Sbjct: 419 MIQAEGVESLSETELRQACRERGLLGLLSVEEMRLQLRDWLDLSLNHSVPSSLLILSRAF 478

Query: 61  SVSGKVKPEEAVQATLSSLPDEVVDTVGVTALPSEDSVSERRRKLXXXXXXXXXXXXXXX 120
           SVSGKVKPEEAVQATLSSLPDEVVDTVGVTALPSEDSVSERRRKL               
Sbjct: 479 SVSGKVKPEEAVQATLSSLPDEVVDTVGVTALPSEDSVSERRRKLEFLEMQEELIKEEEE 538

Query: 121 XXXXXXXXXXXSVGSQKDVALEEMTLPTAREAQEQARAKTLEKHEQLCXXXXXXXXXXXX 180
                      SVGSQKDVALEEMT+PTAREAQEQARAKTLEKHEQLC            
Sbjct: 539 EEEEKQAKMKESVGSQKDVALEEMTIPTAREAQEQARAKTLEKHEQLCELSRALAVLASA 598

Query: 181 XXXXXXXXXFLKLVKKEIDLYNSMVDKEGTXXXXXXXXXXXXXXXXSDQAAETAISDKVS 240
                    FLKLVKKEIDLYN+MVDKEGT                SDQAAETA+ +KVS
Sbjct: 599 SSVSREREEFLKLVKKEIDLYNNMVDKEGTENEEEAKKAYRAAREESDQAAETAMGNKVS 658

Query: 241 SALINRVDAMLQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVASAAMYLKDHLDKEG 300
           SALI RVDAMLQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVASAAMYLKDHLDKEG
Sbjct: 659 SALIERVDAMLQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVASAAMYLKDHLDKEG 718

Query: 301 IQELISNLSKDREGKILVEDIVKLGSQM 328
           IQELISNL+KDREGKILVEDIVKLGSQM
Sbjct: 719 IQELISNLAKDREGKILVEDIVKLGSQM 746


>29678.m000507 leucine zipper-ef-hand containing transmembrane
           protein, putative
          Length = 731

 Score =  231 bits (590), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 126/201 (62%), Positives = 142/201 (70%)

Query: 135 SQKDVALEEMTLPTAREAQEQARAKTLEKHEQLCXXXXXXXXXXXXXXXXXXXXXFLKLV 194
           S++DV L+EMT  TA EAQE ARA+T+EK E LC                     FL LV
Sbjct: 531 SKEDVPLKEMTALTASEAQELARARTMEKQEHLCKLSRALAVLASASSVSREREEFLGLV 590

Query: 195 KKEIDLYNSMVDKEGTXXXXXXXXXXXXXXXXSDQAAETAISDKVSSALINRVDAMLQKL 254
            KEI+LYNSMV+KEGT                SD+A+E    D+VSSALI RVDAMLQ L
Sbjct: 591 NKEIELYNSMVEKEGTDGEKEAFRAYVAAREESDRASEVDERDEVSSALIERVDAMLQNL 650

Query: 255 EKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVASAAMYLKDHLDKEGIQELISNLSKDREG 314
           EKEIDDVDAKIGD WR+LDRD DGKVTPEEVASAAMYLKD L +EGIQELISNL KD +G
Sbjct: 651 EKEIDDVDAKIGDHWRILDRDSDGKVTPEEVASAAMYLKDTLGEEGIQELISNLCKDGDG 710

Query: 315 KILVEDIVKLGSQMEDDDTAE 335
           KILVEDIVKLGS++ED +TAE
Sbjct: 711 KILVEDIVKLGSRLEDSNTAE 731



 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 3/66 (4%)

Query: 1   MIQAEGVESLSETELHQACRERGLLGLLSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAF 60
           +IQAEGVESLSE EL + CRERG+LGLLSVEEMRQQ+ + + L +     SS L   + +
Sbjct: 414 LIQAEGVESLSEAELREDCRERGMLGLLSVEEMRQQVFESILLCI---YSSSSLSGVKGW 470

Query: 61  SVSGKV 66
            V GK+
Sbjct: 471 VVVGKI 476