Jatropha Genome Database

JcCA0019701.60
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0019701.60 + phase: 0 /pseudo
         (93 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29647.m002051 bsu-protein phosphatase, putative                       185   3e-48
30221.m002245 hypothetical protein                                     67   2e-12

>29647.m002051 bsu-protein phosphatase, putative
          Length = 885

 Score =  185 bits (470), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 87/88 (98%), Positives = 88/88 (100%)

Query: 1  MGSKPWLHPAPTYRPLETYWDTDEDAPGPRCGHTLTAVAATNSHGPRLILFGGATAIEGG 60
          MGSKPWLHPAPTYRPLETYWDTDEDAPGPRCGHTLTAVAATN+HGPRLILFGGATAIEGG
Sbjct: 1  MGSKPWLHPAPTYRPLETYWDTDEDAPGPRCGHTLTAVAATNTHGPRLILFGGATAIEGG 60

Query: 61 GSSSAPGIRLAGVTNSVHSYDVLTRKWT 88
          GSSSAPGIRLAGVTNSVHSYDVLTRKWT
Sbjct: 61 GSSSAPGIRLAGVTNSVHSYDVLTRKWT 88


>30221.m002245 hypothetical protein
          Length = 136

 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/56 (60%), Positives = 37/56 (66%), Gaps = 6/56 (10%)

Query: 10  APTYRPLETYWDTDEDAPGPRCGHTLTAVAATNSH------GPRLILFGGATAIEG 59
           APTY  +    +  ED PGPRCGHTLTAVAA          GPRLILFGGATA+EG
Sbjct: 76  APTYSVVNAIIEKKEDGPGPRCGHTLTAVAAVGEEGSPGYIGPRLILFGGATALEG 131