Jatropha Genome Database
- JcCA0019701.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0019701.10 + phase: 0
(139 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30128.m008694 histone h2a, putative 177 1e-45
29647.m002053 histone h2a, putative 176 4e-45
29647.m002054 histone h2a, putative 165 7e-42
29842.m003686 histone h2a, putative 153 2e-38
28166.m001045 histone h2a, putative 139 5e-34
29154.m000212 histone h2a, putative 129 6e-31
29154.m000210 histone h2a, putative 129 6e-31
30128.m008813 histone h2a, putative 128 7e-31
30131.m006936 histone h2a, putative 100 2e-22
29807.m000495 histone h2a, putative 86 6e-18
29841.m002781 histone h2a, putative 85 1e-17
29883.m001981 histone h2a, putative 65 8e-12
>30128.m008694 histone h2a, putative
Length = 140
Score = 177 bits (449), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/114 (78%), Positives = 93/114 (81%)
Query: 26 AGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVP 85
AGLQFPVGRIARFLKAGKYA+RVGAGAP GNAARDNKKNRIVP
Sbjct: 27 AGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVP 86
Query: 86 RHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSASQEF 139
RHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ LLPKK+GKGKGD+ S SQEF
Sbjct: 87 RHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKIGKGKGDMNSLSQEF 140
>29647.m002053 histone h2a, putative
Length = 139
Score = 176 bits (445), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/115 (81%), Positives = 94/115 (81%), Gaps = 2/115 (1%)
Query: 26 AGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVP 85
AGLQFPVGRIARFLKAGKYADRVGAGAP GNAARDNKKNRIVP
Sbjct: 26 AGLQFPVGRIARFLKAGKYADRVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVP 85
Query: 86 RHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGD-IGSASQEF 139
RHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKK KGKGD IGSASQEF
Sbjct: 86 RHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKK-AKGKGDVIGSASQEF 139
>29647.m002054 histone h2a, putative
Length = 141
Score = 165 bits (417), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/115 (72%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
Query: 26 AGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVP 85
AGLQFPVGR+ARFLK G+YA RVG+G+P GNAARDNKKNRI+P
Sbjct: 27 AGLQFPVGRVARFLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIP 86
Query: 86 RHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGK-GKGDIGSASQEF 139
RHIQLAVRNDEELSKLLG VTIA+GGVLPNIHQNLLPKK K GKG+IGS SQEF
Sbjct: 87 RHIQLAVRNDEELSKLLGAVTIASGGVLPNIHQNLLPKKSAKGGKGEIGSVSQEF 141
>29842.m003686 histone h2a, putative
Length = 132
Score = 153 bits (387), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 84/107 (78%), Gaps = 1/107 (0%)
Query: 26 AGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVP 85
AGLQFPVGRIARFLKAGKYA+RVGAGAP GNAARDNKKNRIVP
Sbjct: 23 AGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIVP 82
Query: 86 RHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMG-KGKGD 131
RHIQLA+RNDEELSKLLGTVTIANGGVLPNIH LLPK+ G KG GD
Sbjct: 83 RHIQLAIRNDEELSKLLGTVTIANGGVLPNIHGMLLPKRPGTKGPGD 129
>28166.m001045 histone h2a, putative
Length = 135
Score = 139 bits (349), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 73/99 (73%)
Query: 26 AGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVP 85
AGLQFPVGRIARFLKAGKYA+RVGAGAP RDNKK RIVP
Sbjct: 23 AGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEGFMSMKFLTRDNKKTRIVP 82
Query: 86 RHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKK 124
RHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKK
Sbjct: 83 RHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121
>29154.m000212 histone h2a, putative
Length = 150
Score = 129 bits (323), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/106 (62%), Positives = 73/106 (68%)
Query: 26 AGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVP 85
AGLQFPVGRI R+LK G+YA RVG GAP GNAARDNKKNRI+P
Sbjct: 30 AGLQFPVGRIGRYLKKGRYAQRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIP 89
Query: 86 RHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGD 131
RH+ LAVRNDEEL KLL VTIA+GGVLPNI+ LLPKK K +
Sbjct: 90 RHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTEKATKE 135
>29154.m000210 histone h2a, putative
Length = 150
Score = 129 bits (323), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/106 (62%), Positives = 73/106 (68%)
Query: 26 AGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVP 85
AGLQFPVGRI R+LK G+YA RVG GAP GNAARDNKKNRI+P
Sbjct: 30 AGLQFPVGRIGRYLKKGRYAQRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIP 89
Query: 86 RHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGD 131
RH+ LAVRNDEEL KLL VTIA+GGVLPNI+ LLPKK K +
Sbjct: 90 RHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTEKATKE 135
>30128.m008813 histone h2a, putative
Length = 146
Score = 128 bits (322), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 73/106 (68%)
Query: 26 AGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVP 85
AGLQFPVGRIARFLK G+YA R G+GAP GNAARDNKKNRI P
Sbjct: 28 AGLQFPVGRIARFLKKGRYAQRFGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRINP 87
Query: 86 RHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGD 131
RH+ LAVRNDEEL KLL VTIA+GGVLPNI+ LLPKK G D
Sbjct: 88 RHVLLAVRNDEELGKLLHGVTIASGGVLPNINPVLLPKKSAAGPAD 133
>30131.m006936 histone h2a, putative
Length = 153
Score = 100 bits (250), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 61/99 (61%)
Query: 26 AGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVP 85
AGLQFPVGRI+R+LK G+Y R+G GA GNAA DNKK RI P
Sbjct: 45 AGLQFPVGRISRYLKKGRYGSRIGVGAAVYMAAVLEYLAAEVLELAGNAAADNKKRRITP 104
Query: 86 RHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKK 124
RH+ LAV++DEEL L+ VT + GV+P+I L PKK
Sbjct: 105 RHLMLAVQSDEELQNLMSDVTFPSCGVVPHIPLPLFPKK 143
>29807.m000495 histone h2a, putative
Length = 134
Score = 85.9 bits (211), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 26 AGLQFPVGRIARFLKAGKYAD-RVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIV 84
AGLQFPVGRI R LK+ A RVGA A GNA++D K RI
Sbjct: 33 AGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRIT 92
Query: 85 PRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPK 123
PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ K
Sbjct: 93 PRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 130
>29841.m002781 histone h2a, putative
Length = 135
Score = 84.7 bits (208), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 26 AGLQFPVGRIARFLKAGKYAD-RVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIV 84
AGLQFPVGR+ R LK A+ RVGA A GNA++D K RI
Sbjct: 34 AGLQFPVGRVHRLLKTRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRIT 93
Query: 85 PRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPK 123
PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ K
Sbjct: 94 PRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 131
>29883.m001981 histone h2a, putative
Length = 136
Score = 65.5 bits (158), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 26 AGLQFPVGRIARFLKAGKYAD-RVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIV 84
AG+QFPVGRI R LK A RVGA A GNA++D K RI
Sbjct: 37 AGIQFPVGRIHRHLKQRTSAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRIT 96
Query: 85 PRHIQLAVRNDEELSKLL-GTV 105
PRH+QLA+R DEEL L+ GT+
Sbjct: 97 PRHLQLAIRGDEELDTLIKGTI 118