Jatropha Genome Database

JcCA0019191.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0019191.20 - phase: 0 /partial
         (153 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27613.m000622 phosphoribosylamine-glycine ligase, putative            231   1e-61
30101.m000377 phosphoribosylamine-glycine ligase, putative             57   3e-09

>27613.m000622 phosphoribosylamine-glycine ligase, putative
          Length = 301

 Score =  231 bits (588), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 111/143 (77%), Positives = 120/143 (83%)

Query: 11  VVLIREFEVDFILLAGYLKLIPAELVQAYPKRILNIHPALLPAFGGKGYYGMKVHKAVIA 70
           V  +RE EVDFILLAGYLKLIPAEL +AYP+ I NIHP+LLPAFGGKGYYGMKVHKAVIA
Sbjct: 159 VAALRELEVDFILLAGYLKLIPAELSRAYPRCIFNIHPSLLPAFGGKGYYGMKVHKAVIA 218

Query: 71  SGARYSGPTIHFVDEHYDTGLIIAQRVVPVLANDTXXXXXXXXXXXXXXXYVEVTAALCE 130
           SGARYSGPTIHFVDEHYDTG I+AQRVVPVLA+DT               YVEVT ALCE
Sbjct: 219 SGARYSGPTIHFVDEHYDTGRILAQRVVPVLADDTAEELAARVLREEHRLYVEVTMALCE 278

Query: 131 ERIIWREDGVPLIRSRENPNQYS 153
           ERIIWREDGVPLI+SRENP++YS
Sbjct: 279 ERIIWREDGVPLIQSRENPSEYS 301


>30101.m000377 phosphoribosylamine-glycine ligase, putative
          Length = 341

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 5/81 (6%)

Query: 18  EVDFILLAGYLKLIPAELVQAYPKRILNIHPALLPAFGGKGYYGMKVHKAVIASGARYSG 77
           + DF++LA Y++++    +++Y K I+NIH  LLP+F G G+      K    +G +  G
Sbjct: 205 DTDFLVLARYMQILSGNFLRSYGKDIINIHHGLLPSFKG-GHPS----KQAFDAGVKLIG 259

Query: 78  PTIHFVDEHYDTGLIIAQRVV 98
            T HFV E  D G II Q ++
Sbjct: 260 ATTHFVTEELDAGPIIEQMLL 280