Jatropha Genome Database

JcCA0019191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0019191.10 + phase: 1 /partial
         (108 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27613.m000621 Calcium-binding protein, putative                       192   3e-50
29964.m000157 Calcium-binding protein, putative                       165   4e-42
29608.m000205 Calcium-binding protein, putative                       149   3e-37
29726.m003934 structural constituent of ribosome, putative             78   9e-16

>27613.m000621 Calcium-binding protein, putative
          Length = 341

 Score =  192 bits (488), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 95/108 (87%), Positives = 102/108 (94%)

Query: 1   QLLGEILLDRSNTAVMVRYVSSKDNLRILMNLLRESSKNIQIDAFHVFKLFAANQNKPPE 60
           +LL +ILLDRSN+A+MV+YVSSKDNLRILMNLLRESSKNI+IDAFHVFKLFAANQNKPPE
Sbjct: 234 KLLSDILLDRSNSAIMVQYVSSKDNLRILMNLLRESSKNIKIDAFHVFKLFAANQNKPPE 293

Query: 61  IVGILIANRSKLLRFLADFKMDREDEQFEEDKTLVIKEIASLKQAGDH 108
           IV ILIANRSKLLRFLADFK+DREDEQFEEDKT VIKEIA LKQAG  
Sbjct: 294 IVSILIANRSKLLRFLADFKLDREDEQFEEDKTQVIKEIAELKQAGSQ 341


>29964.m000157 Calcium-binding protein, putative
          Length = 445

 Score =  165 bits (418), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 78/103 (75%), Positives = 92/103 (89%)

Query: 1   QLLGEILLDRSNTAVMVRYVSSKDNLRILMNLLRESSKNIQIDAFHVFKLFAANQNKPPE 60
           +LLG++LLDRSN+ VM RY+SS+DNLRILMNLLRESSK+IQI+AFHVFKLFAANQNKP +
Sbjct: 338 KLLGDMLLDRSNSVVMTRYISSRDNLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPAD 397

Query: 61  IVGILIANRSKLLRFLADFKMDREDEQFEEDKTLVIKEIASLK 103
           I+ IL+ANRSKLLR  ADFK D+EDEQFE DK  V+KEIA L+
Sbjct: 398 IISILVANRSKLLRLFADFKTDKEDEQFEADKAQVVKEIAGLE 440


>29608.m000205 Calcium-binding protein, putative
          Length = 351

 Score =  149 bits (376), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 69/107 (64%), Positives = 92/107 (85%), Gaps = 1/107 (0%)

Query: 1   QLLGEILLDRSNTAVMVRYVSSKDNLRILMNLLRESSKNIQIDAFHVFKLFAANQNKPPE 60
           +LLG++LL+RSN+ VM+RYVSS DN+RILMNL R+S+K IQ++ FHVFKLF ANQ+KPPE
Sbjct: 233 KLLGDVLLERSNSNVMIRYVSSLDNMRILMNLFRDSNKTIQLETFHVFKLFVANQSKPPE 292

Query: 61  IVGILIANRSKLLRFLADFKMDREDEQFEEDKTLVIKEIASLKQAGD 107
           I+ +L+ NRSKLLRFL DF +D++D+QF+ DK  V+KEIA+L + GD
Sbjct: 293 IISVLVTNRSKLLRFLGDFNIDKDDDQFQLDKVQVMKEIATL-EIGD 338


>29726.m003934 structural constituent of ribosome, putative
          Length = 631

 Score = 77.8 bits (190), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 55/83 (66%)

Query: 1   QLLGEILLDRSNTAVMVRYVSSKDNLRILMNLLRESSKNIQIDAFHVFKLFAANQNKPPE 60
           +LL + LL+  N+ +M RY+     L+++M LL++SSKNIQI AFH+FK+F AN NKP E
Sbjct: 234 KLLSDFLLEPPNSHIMKRYILEVRYLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPRE 293

Query: 61  IVGILIANRSKLLRFLADFKMDR 83
           +  IL  N  +L+  L D  + +
Sbjct: 294 VKVILAKNNERLVELLNDLSVGK 316