Jatropha Genome Database

JcCA0018411.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0018411.10 - phase: 0 /partial
         (302 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29989.m000426 solanesyl diphosphate synthase, putative                569   e-163
29759.m000284 geranylgeranyl pyrophosphate synthase, putative         224   4e-59
46739.m000013 geranyl geranyl pyrophosphate synthase, putative        140   5e-34
27451.m000253 geranyl geranyl pyrophosphate synthase, putative        132   3e-31
29646.m001058 geranyl geranyl pyrophosphate synthase, putative        113   8e-26
30091.m000229 geranyl geranyl pyrophosphate synthase, putative         73   2e-13

>29989.m000426 solanesyl diphosphate synthase, putative
          Length = 420

 Score =  569 bits (1466), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 278/302 (92%), Positives = 292/302 (96%)

Query: 1   IVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIH 60
           IVGAENPVLMSAAEQIFGAGGKRMRPALVFLV+RATAE+ GLKELT KHRRLAEIIEMIH
Sbjct: 119 IVGAENPVLMSAAEQIFGAGGKRMRPALVFLVARATAEVIGLKELTIKHRRLAEIIEMIH 178

Query: 61  TASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSWYLANLESIEVIKLISQ 120
           TASLIHDDVLDES+MRRGKETVHQLYGTRVA+LAGDFMFAQSSWYLANLE+IEVIKLISQ
Sbjct: 179 TASLIHDDVLDESNMRRGKETVHQLYGTRVAILAGDFMFAQSSWYLANLENIEVIKLISQ 238

Query: 121 VIKDFASGEIKQASSLFDCDVKLEEYLIKSYYKTASLIAASTKGAAIFSGVDSSISEQMY 180
           VIKDFASGEIKQASSLFDCDV+LEEYLIKSYYKTASLIAASTKGAAIFSGVD S++EQMY
Sbjct: 239 VIKDFASGEIKQASSLFDCDVELEEYLIKSYYKTASLIAASTKGAAIFSGVDRSVAEQMY 298

Query: 181 EYGKNLGLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPKLREIIESE 240
           EYGKNLGLSFQVVDD+LDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKE KLREIIESE
Sbjct: 299 EYGKNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKETKLREIIESE 358

Query: 241 FCETGSLDKAVELVKHRGGIERAQELANEKAYLAIQSLNCLPRGAFRSALEEMVLYNLER 300
           FCETGSLD+A+ELVK   GIE+AQELA EKA LAIQ+L+CLPRGAFRSALE MVLYNLER
Sbjct: 359 FCETGSLDEAIELVKQCRGIEKAQELAKEKADLAIQNLDCLPRGAFRSALEGMVLYNLER 418

Query: 301 ID 302
           ID
Sbjct: 419 ID 420


>29759.m000284 geranylgeranyl pyrophosphate synthase, putative
          Length = 417

 Score =  224 bits (571), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 125/295 (42%), Positives = 193/295 (65%), Gaps = 13/295 (4%)

Query: 1   IVGAENPVLMSAAEQIFGAG--GKRMRPALVFLVSRA--------TAEIAG---LKELTT 47
           +V AE P L SAAE  F  G  GKR RP ++ L++ A        T    G     EL  
Sbjct: 97  MVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVHIPEPTPTGVGDVVATELRA 156

Query: 48  KHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSWYLA 107
           + + +AEI EMIH ASL+HDDVLD++D RRG  +++ + G +VAVLAGDF+ +++   LA
Sbjct: 157 RQQSIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVAVLAGDFLLSRACVALA 216

Query: 108 NLESIEVIKLISQVIKDFASGEIKQASSLFDCDVKLEEYLIKSYYKTASLIAASTKGAAI 167
           +L++ EV+ L++ V++   +GE  Q +S  +    +E Y+ K+YYKTASLI+ S K  A+
Sbjct: 217 SLKNTEVVSLLATVVEHLVTGETMQMTSTSEQRCSMEYYMQKTYYKTASLISNSCKAIAL 276

Query: 168 FSGVDSSISEQMYEYGKNLGLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFAL 227
            +G  + ++   +EYGKNLGL+FQ++DDVLDFT ++  LGK + SD+  G +TAP++FA+
Sbjct: 277 LAGQTAEVAMLAFEYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAM 336

Query: 228 EKEPKLREIIESEFCETGSLDKAVELVKHRGGIERAQELANEKAYLAIQSLNCLP 282
           E+ P+LR +++  F + G++D A+E +    GI+R +ELA + A LA  +++ LP
Sbjct: 337 EEFPQLRAVVDRGFDKPGNVDIALEYLGKSRGIQRTRELAAKHANLAAAAIDSLP 391


>46739.m000013 geranyl geranyl pyrophosphate synthase, putative
          Length = 263

 Score =  140 bits (354), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 114/193 (59%)

Query: 48  KHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSWYLA 107
           +H  LA IIE IHTA+L+HDDV+D S +RRG+ T +  +G   +VL GDF+++++   L 
Sbjct: 37  EHITLAGIIEFIHTATLLHDDVVDISSLRRGRATANAKWGNAPSVLVGDFLYSRAFQLLV 96

Query: 108 NLESIEVIKLISQVIKDFASGEIKQASSLFDCDVKLEEYLIKSYYKTASLIAASTKGAAI 167
            L S+ ++ L++      A GE+ Q +   D     E Y      KTA L AA+T+GAAI
Sbjct: 97  ELGSMPLMSLMADTTNTIAEGEVLQLTKAGDPATDEEAYFSVIESKTAVLFAAATEGAAI 156

Query: 168 FSGVDSSISEQMYEYGKNLGLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFAL 227
            SG  +  + +   YG NLG +FQ+ DDVLD+    E++GK  G DLA+G  T P+I  L
Sbjct: 157 LSGASTEDAARWRRYGLNLGNAFQLADDVLDYLGDPEKMGKNIGDDLAEGKPTLPLIRTL 216

Query: 228 EKEPKLREIIESE 240
           +      +I+ S+
Sbjct: 217 QVGTPADQILVSQ 229


>27451.m000253 geranyl geranyl pyrophosphate synthase, putative
          Length = 372

 Score =  132 bits (331), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 129/242 (53%), Gaps = 21/242 (8%)

Query: 5   ENPV-LMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIHTAS 63
           +NPV +  A      AGGKR+RP L      A  E+ G  E T      A  +EMIHT S
Sbjct: 104 QNPVKIHDAMRYSLLAGGKRVRPVLCI----AACELVGGDEATAMPAACA--MEMIHTMS 157

Query: 64  LIHDDV--LDESDMRRGKETVHQLYGTRVAVLAGD----FMFAQSSWYLANLESIEVIKL 117
           LIHDD+  +D  D+RRGK T H+++G   A+LAGD    F F   +    N+    V++ 
Sbjct: 158 LIHDDLPCMDNDDLRRGKPTNHKMFGEETAILAGDALLSFSFEHVARSTKNVSPDRVVRA 217

Query: 118 ISQV-----IKDFASGEIKQASSLF-DCDVKLEEYLIKSYYKTASLIAASTKGAAIFSGV 171
           I+++      +   +G+I    S   D  V   EY+    +KTA L+ AS    AI  G 
Sbjct: 218 IAELGSAVGSEGLVAGQIVDIDSEGKDVSVSDLEYI--HIHKTAKLLEASVVCGAILGGA 275

Query: 172 DSSISEQMYEYGKNLGLSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEP 231
           D    E++ +Y + +GL FQVVDD+LD T+S+E+LGK AG DL     T P +  +++  
Sbjct: 276 DDESVERVRKYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLITDKATYPKLMGIDEAR 335

Query: 232 KL 233
           KL
Sbjct: 336 KL 337


>29646.m001058 geranyl geranyl pyrophosphate synthase, putative
          Length = 369

 Score =  113 bits (283), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 127/233 (54%), Gaps = 17/233 (7%)

Query: 19  AGGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESDMR 76
           AGGKR+RPAL      A  E+ G  E        A  +EMIHT SLIHDD+  +D  D+R
Sbjct: 115 AGGKRVRPALCL----AACELVGGNESMAMPAACA--VEMIHTMSLIHDDLPCMDNDDLR 168

Query: 77  RGKETVHQLYGTRVAVLAGDFMFAQSSWYLA----NLESIEVIKLISQVIK-----DFAS 127
           RGK T H ++G  VAVLAGD + A +  ++A    N+    +++ + ++ K        +
Sbjct: 169 RGKPTNHIVFGEDVAVLAGDALLALAFEHIAIATLNVSPARIVRAVGELAKAIGAEGLVA 228

Query: 128 GEIKQASSLFDCDVKLEEYLIKSYYKTASLIAASTKGAAIFSGVDSSISEQMYEYGKNLG 187
           G++    S    +V LE+      +KTA L+  +    AI  G      E++ +Y +++G
Sbjct: 229 GQVVDICSEGLSEVGLEKLEFIHVHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIG 288

Query: 188 LSFQVVDDVLDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPKLREIIESE 240
           L FQVVDD+LD T+S+++LGK AG DL    +T P +  ++K  +  E +  E
Sbjct: 289 LLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLMGIDKSREFAEKLNKE 341


>30091.m000229 geranyl geranyl pyrophosphate synthase, putative
          Length = 345

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 29/204 (14%)

Query: 14  EQIFGA--------GGKRMRPALVFLVSRATAEIAGLKELTTKHRRLAEIIEMIHTASLI 65
           EQI+ A        G KR  P +      A  E+ G   L       A  +EM+HTASLI
Sbjct: 79  EQIYEAMRYSALAKGAKRAPPVMCV----AACELFGGNRLAAFPTACA--LEMVHTASLI 132

Query: 66  HDDV--LDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSWYLAN------LESIEVIKL 117
           HDD+  +D+   RRG+ + H +YG  +A+LAGD +F     ++ +      +    ++++
Sbjct: 133 HDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGYRHIVSHTPTGLVPEPRLLRV 192

Query: 118 ISQVIKDFASGEIKQASSLF---DCDVKLEEYLIKSYYKTASLIAASTKGAAIFSGVDSS 174
           I+++ +  A G    A+  F   +      E+  +  Y   S  +A   G  + +G +  
Sbjct: 193 IAEIAR--AVGSTGMAAGQFLDLEGGPSFVEFAQEKKYGEMSECSAVCGG--LLAGAEDD 248

Query: 175 ISEQMYEYGKNLGLSFQVVDDVLD 198
             +++  YG+ +G+ +QV+DDVL+
Sbjct: 249 EIQRLRRYGRAVGVLYQVIDDVLE 272