Jatropha Genome Database

JcCA0015401.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0015401.20 - phase: 0 /partial
         (258 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m013921 protein phosphatase pp2a regulatory subunit B, put...   370   e-103
29794.m003344 protein phosphatase pp2a regulatory subunit B, put...   237   4e-63
27395.m000083 protein phosphatase pp2a regulatory subunit B, put...    81   4e-16

>30147.m013921 protein phosphatase pp2a regulatory subunit B,
           putative
          Length = 506

 Score =  370 bits (949), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/247 (76%), Positives = 202/247 (81%), Gaps = 12/247 (4%)

Query: 12  VKEHKCKKVKETDADSVVYSESALLAEKSFSSELQKPSTVNGRHLEWTGDIVKNISPFQE 71
           VKE K KKVKE D  S+V SESALLAE+SF  E  KPS  NG HL WT +   N SPFQE
Sbjct: 145 VKECKAKKVKEIDPTSIVCSESALLAERSFIREQGKPS--NGYHLGWTEN---NSSPFQE 199

Query: 72  GHTKIAHAEDTTRASCRKVYAHAHDFXXXXXXXXXDGETFISADDLRINLWNLEISNQCF 131
           GHTK A AEDTTRASCRKVYAHAHDF         DGETFISADDLRINLWNLEIS+QCF
Sbjct: 200 GHTKFACAEDTTRASCRKVYAHAHDFNINSISNNSDGETFISADDLRINLWNLEISDQCF 259

Query: 132 NIIDMKPANMEDLTEVITSAEFHPIYCNMLAYSSSRGFIRLVDMRQSALCDQSAMILQDA 191
           NIIDMKP+NMEDLTEVITSAEFHP+YCNMLAYSSSRGFI LVDMRQSALCDQSA ILQDA
Sbjct: 260 NIIDMKPSNMEDLTEVITSAEFHPLYCNMLAYSSSRGFIHLVDMRQSALCDQSARILQDA 319

Query: 192 DCHEPKSFFTEIIASISDMKFTNDGQHILSRDYLNLKVFDLNYTLWDMRKNALPVAIFKI 251
           +C   KSFFTEIIASISD+KFTNDG HILSRDY+NLK       LWD+R + LP++IFKI
Sbjct: 320 ECRGSKSFFTEIIASISDVKFTNDGHHILSRDYMNLK-------LWDIRMDPLPISIFKI 372

Query: 252 HEHLQPK 258
           HEHL+PK
Sbjct: 373 HEHLRPK 379


>29794.m003344 protein phosphatase pp2a regulatory subunit B,
           putative
          Length = 513

 Score =  237 bits (605), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 114/183 (62%), Positives = 140/183 (76%), Gaps = 8/183 (4%)

Query: 76  IAHAEDTTRASCRKVYAHAHDFXXXXXXXXXDGETFISADDLRINLWNLEISNQCFNIID 135
           I+H E    A CR++YAHAHD+         DGETF+SADDLRINLWNLEISNQ FNI++
Sbjct: 215 ISH-ETNLVARCRRIYAHAHDYHINSISSNSDGETFVSADDLRINLWNLEISNQSFNIVN 273

Query: 136 MKPANMEDLTEVITSAEFHPIYCNMLAYSSSRGFIRLVDMRQSALCDQSAMILQDADCHE 195
           +KP NMEDLTEVITSAEFHP +CNMLAYSSS+  IRL+DMRQSALCD  +   ++ +   
Sbjct: 274 LKPNNMEDLTEVITSAEFHPSHCNMLAYSSSKSSIRLIDMRQSALCDTHSKSFEEQEVPG 333

Query: 196 PKSFFTEIIASISDMKFTNDGQHILSRDYLNLKVFDLNYTLWDMRKNALPVAIFKIHEHL 255
            +SFFTEIIASISD+KF  DG+HILSRDY+NLK       LWD+  ++ PVA F++HE+L
Sbjct: 334 SRSFFTEIIASISDIKFAKDGRHILSRDYMNLK-------LWDINMDSGPVASFQVHEYL 386

Query: 256 QPK 258
           +PK
Sbjct: 387 RPK 389


>27395.m000083 protein phosphatase pp2a regulatory subunit B,
           putative
          Length = 194

 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 7/62 (11%)

Query: 197 KSFFTEIIASISDMKFTNDGQHILSRDYLNLKVFDLNYTLWDMRKNALPVAIFKIHEHLQ 256
           +SFFTEIIASISD+KF  DG+HILSRDY+ LK       LWD+  ++ PVA F++HE+L+
Sbjct: 16  RSFFTEIIASISDIKFAKDGRHILSRDYMTLK-------LWDINMDSGPVATFQVHEYLR 68

Query: 257 PK 258
           PK
Sbjct: 69  PK 70