Jatropha Genome Database

JcCA0015391.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0015391.10 + phase: 0 /pseudo
         (313 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29634.m002164 conserved hypothetical protein                          207   5e-54
29983.m003314 conserved hypothetical protein                          204   5e-53
30170.m014019 conserved hypothetical protein                           67   1e-11
29912.m005522 conserved hypothetical protein                           50   2e-06

>29634.m002164 conserved hypothetical protein
          Length = 363

 Score =  207 bits (527), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 167/334 (50%), Positives = 197/334 (58%), Gaps = 35/334 (10%)

Query: 1   MAEHFKVKFCRVITSFNSCRSKDPSTLPSNPVPSF---XXXXXXXXXXXXXXXXHNSSIK 57
           MA+  K+KF RVITSFNSCRSKD S LPSN V SF                    +SS+K
Sbjct: 1   MAKPLKLKFSRVITSFNSCRSKDSSALPSNAVHSFLRHSPVKLHLPPPPPSSKPCHSSLK 60

Query: 58  RHMSSALASIKSGFRSRSTANHFSETAYSKSATEFQWEKEEKWHVVAKMYDE-TPRRKIY 116
           RH+SSA ASI   FRSRS       +       EF WE+EEK HVVA+++DE TPRRKIY
Sbjct: 61  RHISSAFASISCRFRSRSPP-----SPPPPPPPEFHWEQEEKCHVVARIFDENTPRRKIY 115

Query: 117 NSLVKS--------DFDNHNILLPPHS-NTEXXXXXXXXXXXSTPR-IYVRNSSTESRLF 166
            SLV S          ++  ILLPP   NTE            TPR I +  SS +S +F
Sbjct: 116 TSLVCSYHFPNNNNSHNSSKILLPPPPPNTERKRRRVRKKKKVTPRVIRISTSSADSEIF 175

Query: 167 SSE------EEDDIYNKETETLVSSTRSFS-DY-SSPDFSTHLQTISEVSHPFG---INH 215
           SSE      +E+DI N+ETETLVSST++FS DY SSP+FS HL+ ISE   PF     N 
Sbjct: 176 SSEGINNECKEEDIDNEETETLVSSTKTFSTDYDSSPEFSPHLEIISE--SPFNRIKYNR 233

Query: 216 RNKKVKKAKRHVTSKARKSCSEAASFS---PARLSTFERLLPCTVDGKVKESFAVVKKSE 272
             KKVKK KR+VT K R  C +++S S   PARLS F+ L+PCTV+GKV+E FAVVKKSE
Sbjct: 234 NKKKVKKGKRYVTRKVRNGCDQSSSSSSSSPARLSRFQWLIPCTVEGKVREGFAVVKKSE 293

Query: 273 DPYXXXXXXXXXXXXXXXXXXVKDLEQLLQCFLS 306
           DP                   VKDLEQLLQCFLS
Sbjct: 294 DPQEDFKRSMLEMIMEKQMFEVKDLEQLLQCFLS 327


>29983.m003314 conserved hypothetical protein
          Length = 340

 Score =  204 bits (519), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 157/328 (47%), Positives = 183/328 (55%), Gaps = 46/328 (14%)

Query: 1   MAEHFKVKFCRVITSFNSCRSKDPSTLPSNPVPSFXXXXXXXXXXXXXXXXH---NSSIK 57
           MA+  K+KF RVITSFNSCRSKD S LPSNPV SF                    +SS+K
Sbjct: 1   MAKPLKLKFSRVITSFNSCRSKDSSALPSNPVHSFLRHSPVKLHLPPLPPSSKPCHSSLK 60

Query: 58  RHMSSALASIKSGFRSRSTANHFSETAYSKSATEFQWEKEEKWHVVAKMYDE-TPRRKIY 116
           RH+SSA ASI   FRSRS       +       EF WE+EEKWHVVAK++DE TPRRKIY
Sbjct: 61  RHISSAFASISCRFRSRSPP-----SPPPPPPPEFHWEQEEKWHVVAKIFDENTPRRKIY 115

Query: 117 NSLVKSD--------FDNHNILL-PPHSNTEXXXXXXXXXXXSTPR-IYVRNSSTESRLF 166
            SLV SD         ++  ILL PP  NTE            TPR I +  SS +S +F
Sbjct: 116 TSLVCSDHFPNNNNSHNSSKILLPPPPPNTERKRRRIRKKKKVTPRVIRISTSSADSEIF 175

Query: 167 SSE------EEDDIYNKETETLVSSTRSFS-DY-SSPDFSTHLQTISEVSHPFGINHRNK 218
           SSE      +E+DI N+ETETLVSST++FS DY SSP+FS HL+ ISE   PF     N+
Sbjct: 176 SSEGINNECKEEDIDNEETETLVSSTKTFSTDYDSSPEFSPHLEIISE--SPFNRIKYNR 233

Query: 219 KVKKAKRHVTSKARKSCSEAASFSPARLSTFERLLPCTVDGKVKESFAVVKKSEDPYXXX 278
             KK K+      RK                  L+PCTV+GKV+ESFAVVKKSEDP    
Sbjct: 234 NKKKVKKGKRYVTRK-----------------WLIPCTVEGKVRESFAVVKKSEDPQEDF 276

Query: 279 XXXXXXXXXXXXXXXVKDLEQLLQCFLS 306
                          VKDLEQLLQCFLS
Sbjct: 277 KRSMLEMIMEKQMFEVKDLEQLLQCFLS 304


>30170.m014019 conserved hypothetical protein
          Length = 440

 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/141 (41%), Positives = 73/141 (51%), Gaps = 6/141 (4%)

Query: 167 SSEEEDDIYNKETETLVSSTRSFSDYSSPDFS-THLQTISEVSHPFGINHRNKKVKKAKR 225
            +EE +++   ETETLV S+RSFS  SS DF    ++T    S          +++K +R
Sbjct: 166 GAEESNEV---ETETLVFSSRSFSYDSSYDFCHPAVETRINKSDSGTKKLSKTRIRKLRR 222

Query: 226 HVTSKARKSCSEAASFSPARLSTFERLLPCTVDGKVKESFAVVKKSEDPYXXXXXXXXXX 285
            V+   R S  E  S SP R S   R+  C  DG VKES AVVKKSEDPY          
Sbjct: 223 QVSKNLRVS-PETVS-SPMRGSVLRRMTSCKTDGMVKESVAVVKKSEDPYEDFKRSMLEM 280

Query: 286 XXXXXXXXVKDLEQLLQCFLS 306
                    KDLE+LLQCFL+
Sbjct: 281 ILEKQMFEEKDLEELLQCFLT 301


>29912.m005522 conserved hypothetical protein
          Length = 301

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 252 LLPCTVDGKVKESFAVVKKSEDPYXXXXXXXXXXXXXXXXXXVKDLEQLLQCFLS 306
           +LP  + GKVK+SFAVVK S DPY                   K+LEQLLQCFLS
Sbjct: 223 VLP--LHGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFSAKELEQLLQCFLS 275