Jatropha Genome Database

JcCA0012252.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0012252.10 + phase: 2 /partial
         (270 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29883.m001985 histone acetyltransferase gcn5, putative                541   e-154
30003.m000332 bromodomain-containing protein, putative                 69   3e-12
29693.m002099 bromodomain-containing protein, putative                 67   7e-12
30190.m010979 bromodomain-containing protein, putative                 59   3e-09
29589.m001268 bromodomain-containing protein, putative                 57   1e-08
30147.m013776 bromodomain-containing protein, putative                 53   2e-07
29740.m000495 bromodomain-containing protein, putative                 52   4e-07
29804.m001526 bromodomain-containing protein, putative                 51   5e-07
30010.m000666 bromodomain-containing protein, putative                 50   1e-06
27894.m000773 bromodomain-containing protein, putative                 49   2e-06
29646.m001093 bromodomain-containing protein, putative                 49   2e-06

>29883.m001985 histone acetyltransferase gcn5, putative
          Length = 561

 Score =  541 bits (1394), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 258/284 (90%), Positives = 264/284 (92%), Gaps = 15/284 (5%)

Query: 1   QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTK 60
           QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTK
Sbjct: 278 QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTK 337

Query: 61  EIYLDKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVY 120
           EIYL+KDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVY
Sbjct: 338 EIYLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVY 397

Query: 121 PGIDFQKKEVGIPKKIIKVEDIPGLREAGWTPDQWGYSRFNAFNTSTDSATNQKHWTAFM 180
            GIDFQKKE GIPKKI+KVEDIPGLREAGWTPDQWG+SRFN FNTSTD+ATNQKHWTAFM
Sbjct: 398 QGIDFQKKEAGIPKKIVKVEDIPGLREAGWTPDQWGHSRFNTFNTSTDTATNQKHWTAFM 457

Query: 181 RSLLKSMHDHADAWPFKEPVDARDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFDMFVAD 240
           RSLLKSMHDH DAWPFKEPVD RDVPDYYDIIKDP+DLKTMSKR+ESEQYYVTFDMFVAD
Sbjct: 458 RSLLKSMHDHVDAWPFKEPVDGRDVPDYYDIIKDPIDLKTMSKRIESEQYYVTFDMFVAD 517

Query: 241 VKRMFANART--------------LEAHFESKVQSGFQSAAKIQ 270
           VKRMFANART              LEAHFESKVQSGFQS AKIQ
Sbjct: 518 VKRMFANARTYNSPDTIYYKCATRLEAHFESKVQSGFQS-AKIQ 560


>30003.m000332 bromodomain-containing protein, putative
          Length = 536

 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 3/69 (4%)

Query: 182 SLLKSMHDHADAWPFKEPVDARD--VPDYYDIIKDPMDLKTMSKRVESEQYYVTFDMFVA 239
           SL+KS+ DH   W FKEPVD     +PDY+ II +PMDL T+  ++E+ QY+ + + F A
Sbjct: 88  SLVKSLMDHPCGWVFKEPVDPDKLHIPDYFSIITNPMDLGTVKSKLENNQYFES-EEFAA 146

Query: 240 DVKRMFANA 248
           DV+  F+NA
Sbjct: 147 DVRLTFSNA 155


>29693.m002099 bromodomain-containing protein, putative
          Length = 570

 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 47/69 (68%), Gaps = 3/69 (4%)

Query: 182 SLLKSMHDHADAWPFKEPVDAR--DVPDYYDIIKDPMDLKTMSKRVESEQYYVTFDMFVA 239
           SL+KS+ +H   W FKEPVD    ++PDY+ +I +PMDL T+  ++E+ QY+   + F A
Sbjct: 88  SLVKSLMNHPCGWVFKEPVDPEKLEIPDYFSVITNPMDLGTVKSKLENNQYF-GAEEFAA 146

Query: 240 DVKRMFANA 248
           DV+  F+NA
Sbjct: 147 DVRLTFSNA 155


>30190.m010979 bromodomain-containing protein, putative
          Length = 718

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 6/100 (6%)

Query: 154 QWGYSRFNAFNTSTDSATNQKHWTAFMR---SLLKSMHDHADAWPFKEPVDA--RDVPDY 208
           +W  S    F ++   +         M+   +LL  +  H   W FKEPVD    ++PDY
Sbjct: 80  EWNRSSSGRFKSTKQPSAPLATNMMVMKQCETLLSRLMSHQYGWVFKEPVDVVKLNIPDY 139

Query: 209 YDIIKDPMDLKTMSKRVESEQYYVTFDMFVADVKRMFANA 248
           Y IIK PMDL T+   + S  Y    + F+ADV+  F NA
Sbjct: 140 YTIIKHPMDLGTIKSNICSGLYSSPLE-FLADVRLTFRNA 178


>29589.m001268 bromodomain-containing protein, putative
          Length = 532

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 6/68 (8%)

Query: 182 SLLKSMHDHADAWPFKEPVDARDVPDYYD-IIKDPMDLKTMSKRVESEQYYVTFDMFVAD 240
           SL+KS+ DH   W FKEPV+    PD    II +PMDL T+  ++E+++Y+   + F AD
Sbjct: 87  SLVKSLMDHPCGWVFKEPVN----PDKLKIIITNPMDLGTVKSKLENDRYF-RIEEFAAD 141

Query: 241 VKRMFANA 248
           V+  F+NA
Sbjct: 142 VRLTFSNA 149


>30147.m013776 bromodomain-containing protein, putative
          Length = 759

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 3/69 (4%)

Query: 182 SLLKSMHDHADAWPFKEPVDAR--DVPDYYDIIKDPMDLKTMSKRVESEQYYVTFDMFVA 239
           +LL  +  H  AW F  PVD    ++PDY+ +IK PMDL T+  ++ +  Y      F A
Sbjct: 213 TLLSRLMLHQYAWVFNNPVDVEKLNIPDYFTVIKHPMDLGTVKSKITTGAYSSPL-AFAA 271

Query: 240 DVKRMFANA 248
           DV+  F+NA
Sbjct: 272 DVRLTFSNA 280


>29740.m000495 bromodomain-containing protein, putative
          Length = 391

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 21/116 (18%)

Query: 164 NTSTDSATNQKHWTAFMR---SLLKSMHDHADAWPFKEPVDARDVP--DYYDIIKDPMDL 218
           + S   A   K     MR   ++L+ +  H  AWPF +PVD + +   DYY++I  PMD 
Sbjct: 93  DASKREAAASKRMQELMRQFGTILRQITQHKWAWPFMQPVDVKGLGLHDYYEVIDKPMDF 152

Query: 219 KTMSKRVESE--QYYVTFDMFVADVKRMFAN--------------ARTLEAHFESK 258
            T+  ++E++    Y       ADV+ +F N              A+TL A FE K
Sbjct: 153 STIKNQMETKDGTGYKNVREICADVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 208


>29804.m001526 bromodomain-containing protein, putative
          Length = 634

 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 3/68 (4%)

Query: 183 LLKSMHDHADAWPFKEPVDAR--DVPDYYDIIKDPMDLKTMSKRVESEQYYVTFDMFVAD 240
           +L  +  H   + F EPVD    ++ DY++IIK PMDL T+ K++ S +Y    D F AD
Sbjct: 240 MLTKLMKHKFGYIFNEPVDVERMNLHDYFEIIKKPMDLGTVKKKLGSNEYESPID-FAAD 298

Query: 241 VKRMFANA 248
           V+  F NA
Sbjct: 299 VRLTFNNA 306


>30010.m000666 bromodomain-containing protein, putative
          Length = 515

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 3/53 (5%)

Query: 198 EPVDA--RDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFDMFVADVKRMFANA 248
           EPVD     +PDY+ II +PMDL T+  ++E+ QY+ + + F ADV+  F+NA
Sbjct: 90  EPVDPDKLQIPDYFSIITNPMDLGTVKSKLENNQYFES-EEFAADVRLTFSNA 141


>27894.m000773 bromodomain-containing protein, putative
          Length = 553

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)

Query: 183 LLKSMHDHADAWPFKEPVDARDVP--DYYDIIKDPMDLKTMSKRVESEQYYVTFDMFVAD 240
           LL+ +  H   W F +PVD + +   DY+ IIK PMDL T+  R++ + +Y +   F  D
Sbjct: 219 LLEKLMKHQYGWVFNKPVDVKKLKLHDYFKIIKHPMDLGTVKSRLK-KNWYKSPKEFAED 277

Query: 241 VKRMFANA 248
           VK  F NA
Sbjct: 278 VKLTFNNA 285


>29646.m001093 bromodomain-containing protein, putative
          Length = 742

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 7/77 (9%)

Query: 174 KHWTAFMRSLLKSMHDHADAWPFKEPVDARDVP--DYYDIIKDPMDLKTMSKRVESEQYY 231
           K+ +A +  L+K    H   W FK PVD + +   DY+ IIK PMDL T+  R+ ++ +Y
Sbjct: 401 KNCSALLEKLMK----HKYGWVFKSPVDVKGLGLHDYFTIIKHPMDLGTVKTRL-NKNWY 455

Query: 232 VTFDMFVADVKRMFANA 248
            + + F  DV+  F NA
Sbjct: 456 KSPEEFAEDVRLTFHNA 472