Jatropha Genome Database

JcCA0012121.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0012121.20 - phase: 0 /partial
         (177 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30115.m001234 nicotinate phosphoribosyltransferase, putative          356   3e-99

>30115.m001234 nicotinate phosphoribosyltransferase, putative
          Length = 561

 Score =  356 bits (913), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 167/177 (94%), Positives = 173/177 (97%)

Query: 1   GHEVDAFGVGTNLVTCFAQAALGCVFKLVEINNQPRIKLSEDVSKVSIPCKKRSYRLYGK 60
           GHEVDAFG+GT LVTC+AQAALGCVFKLVEINNQPRIKLSEDVSKVSIPCKKR YRLYG+
Sbjct: 385 GHEVDAFGIGTYLVTCYAQAALGCVFKLVEINNQPRIKLSEDVSKVSIPCKKRCYRLYGR 444

Query: 61  EGYPLVDIMTGENEPSPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSLGKAREE 120
           EGYPLVDIMTGENEPSPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWP + GKARE+
Sbjct: 445 EGYPLVDIMTGENEPSPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPRNTGKARED 504

Query: 121 LPPLKDIRDRCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 177
           LPPLKDIR+RCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ
Sbjct: 505 LPPLKDIRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 561