Jatropha Genome Database

JcCA0009731.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0009731.20 + phase: 0 
         (290 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29647.m002028 conserved hypothetical protein                          325   2e-89
29976.m000508 RAB6-interacting protein, putative                      112   1e-25
29908.m006267 Restin, putative                                        103   8e-23
28535.m000124 Myosin-1, putative                                      103   8e-23
30128.m008718 conserved hypothetical protein                           94   1e-19
29844.m003239 protein binding protein, putative                        91   5e-19
29703.m001475 ATP binding protein, putative                            91   8e-19
30131.m007000 conserved hypothetical protein                           62   3e-10
29729.m002383 Myosin heavy chain, embryonic smooth muscle isofor...    55   3e-08

>29647.m002028 conserved hypothetical protein
          Length = 313

 Score =  325 bits (832), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 184/320 (57%), Positives = 215/320 (67%), Gaps = 37/320 (11%)

Query: 1   MMEMTKKE--TSHRWWFDSHHSFRRSPWLQSTLGELDVKTKAMLKLIEEDADSFSQRAEL 58
           M+EMTKKE  TSH WWFDSHHS  RSPWLQSTL ELD KTKAMLK+IEEDADSF+QRAE+
Sbjct: 1   MVEMTKKEMETSHWWWFDSHHSSLRSPWLQSTLAELDNKTKAMLKVIEEDADSFAQRAEM 60

Query: 59  FYKKRPELISMVEDFYRTYRSLAERYDQLKSDSANRLLTTLASPFYTKCLPQKSM----- 113
           +YKKRPELISMVEDFYRT+RSLAERYDQLKSDS NRLLTTL SPF  K   QK M     
Sbjct: 61  YYKKRPELISMVEDFYRTHRSLAERYDQLKSDSGNRLLTTLGSPFSAKYQSQKFMGGMDR 120

Query: 114 ----ESPFY-----------------TKCQPQKLMEEMDQSCDSSSETYDPEDSAESXXX 152
                S  Y                    + QK +  M+Q+ DS S+ YD EDSAES   
Sbjct: 121 ADDSHSETYELQKSVGGMNRAYDSHSETYEHQKFVCGMNQTYDSHSDIYDLEDSAES--- 177

Query: 153 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRVIEVS--SAVSNEEMAKLQEEIERLKEE 210
                                         TR ++      V N+E+AKL EEIERLKEE
Sbjct: 178 --EVDDPEQADETQSEIEMGEVEEPEQRLETREVQAEDLGTVCNDEVAKLHEEIERLKEE 235

Query: 211 NRVQRDQLFKKDEEKREVIRQLSVAVDVLKLENVELRKSVARDSPKTKRKSLFEFEKLKD 270
           NR+Q+DQL +KDEEKREVIRQLS+AV+V+KLEN++LRK VARDSP  K+ S FEF KLK+
Sbjct: 236 NRIQKDQLLQKDEEKREVIRQLSLAVEVIKLENLKLRKCVARDSP--KKGSFFEFNKLKE 293

Query: 271 IFAGKLFNGSSNSRGTLVAV 290
           +F+GKLFNGS+NSR ++VA+
Sbjct: 294 VFSGKLFNGSANSRLSVVAL 313


>29976.m000508 RAB6-interacting protein, putative
          Length = 628

 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 49/86 (56%), Positives = 65/86 (75%)

Query: 2  MEMTKKETSHRWWFDSHHSFRRSPWLQSTLGELDVKTKAMLKLIEEDADSFSQRAELFYK 61
          M+  +   SH WW+DSH S + S WL   L E+D   + MLKLIEED DSF+++AE++Y+
Sbjct: 12 MKRLQSRKSHSWWWDSHVSPKNSKWLAENLEEMDRSVRRMLKLIEEDGDSFAKKAEMYYQ 71

Query: 62 KRPELISMVEDFYRTYRSLAERYDQL 87
          KRPEL+S+VE+FYR YRSLAERYD +
Sbjct: 72 KRPELVSLVEEFYRMYRSLAERYDHV 97


>29908.m006267 Restin, putative
          Length = 929

 Score =  103 bits (258), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 48/97 (49%), Positives = 69/97 (71%), Gaps = 5/97 (5%)

Query: 9   TSHRWWFDSHHSFRRSPWLQSTLGELDVKTKAMLKLIEEDADSFSQRAELFYKKRPELIS 68
            ++ WW+ SH   ++S WL+  L +++ K   MLK+I+ D DSF+QR+E++Y+KRPELI 
Sbjct: 8   NAYSWWWASHIRTKQSKWLEENLQDMEEKVSNMLKIIDNDGDSFAQRSEMYYRKRPELIV 67

Query: 69  MVEDFYRTYRSLAERYDQLKSD--SANRLLTTLASPF 103
            VE+ YR+YR+LAERYD L  D  SANR   T+A+ F
Sbjct: 68  QVEESYRSYRALAERYDHLSKDMQSANR---TIAAVF 101


>28535.m000124 Myosin-1, putative
          Length = 1089

 Score =  103 bits (257), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 53/122 (43%), Positives = 79/122 (64%), Gaps = 9/122 (7%)

Query: 9   TSHRWWFDSHHSFRRSPWLQSTLGELDVKTKAMLKLIEEDADSFSQRAELFYKKRPELIS 68
            ++ WW+ SH   ++S W++  L +++ K + +LKLIEED DSF++RAE++YKKRPELI 
Sbjct: 8   NAYSWWWASHIRTKQSKWMEQNLQDMEEKVQTVLKLIEEDGDSFARRAEMYYKKRPELIH 67

Query: 69  MVEDFYRTYRSLAERYDQLKSDSANRLLTTLASPFYTKCLPQKSME------SPFYTKCQ 122
            VE+ YR YR+LAERYD + ++  N    T+AS F  +   Q +ME      SP + K  
Sbjct: 68  FVEESYRAYRALAERYDHISTELQN-ANNTIASVFPEQV--QFAMEDDEDEASPRFPKKA 124

Query: 123 PQ 124
           P+
Sbjct: 125 PE 126


>30128.m008718 conserved hypothetical protein
          Length = 229

 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 62/80 (77%)

Query: 13 WWFDSHHSFRRSPWLQSTLGELDVKTKAMLKLIEEDADSFSQRAELFYKKRPELISMVED 72
          WW DSH+   +SPWLQ+ L +LD K K ++ LI++D DSF++RAE+FYK+RP+L+ ++++
Sbjct: 11 WWSDSHNRPHQSPWLQAILSDLDHKVKTIVNLIQDDGDSFTERAEMFYKRRPDLLKILKE 70

Query: 73 FYRTYRSLAERYDQLKSDSA 92
             +Y  LAE++D+L+S S+
Sbjct: 71 LQESYCLLAEKFDRLRSPSS 90


>29844.m003239 protein binding protein, putative
          Length = 1786

 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 56/72 (77%), Gaps = 5/72 (6%)

Query: 34  LDVKTKAMLKLIEEDADSFSQRAELFYKKRPELISMVEDFYRTYRSLAERYDQLKSD--S 91
           +D K KAM+KLIEEDADSF++RAE++YKKRPEL+ +VE+FYR YR+LAERYD    +   
Sbjct: 1   MDAKVKAMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGELRQ 60

Query: 92  ANRLLTTLASPF 103
           A+R   T+A  F
Sbjct: 61  AHR---TMAEAF 69


>29703.m001475 ATP binding protein, putative
          Length = 1938

 Score = 90.5 bits (223), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 38/53 (71%), Positives = 48/53 (90%)

Query: 34 LDVKTKAMLKLIEEDADSFSQRAELFYKKRPELISMVEDFYRTYRSLAERYDQ 86
          +DVK K M+KLIEEDADSF++RAE++YKKRPEL+ +VE+FYR YR+LAERYD 
Sbjct: 1  MDVKVKHMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDH 53


>30131.m007000 conserved hypothetical protein
          Length = 265

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 53/74 (71%), Gaps = 1/74 (1%)

Query: 16 DSHHSFRRSPWLQSTLGELDVKTKAMLKLIEEDADSFSQRAELFYKKRPELISMVEDFYR 75
          D+H+S ++S WL++TL +++ + +A++ L+ ED +S S + + +  +R EL  M+E F  
Sbjct: 16 DNHNSIQQSQWLRATLSDMNKRMRAIMTLLAEDENS-SAKTKNYDNRRLELFQMLEHFNN 74

Query: 76 TYRSLAERYDQLKS 89
          +Y SLAE+YD+L+S
Sbjct: 75 SYCSLAEKYDRLRS 88


>29729.m002383 Myosin heavy chain, embryonic smooth muscle
          isoform, putative
          Length = 540

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 39/57 (68%)

Query: 34 LDVKTKAMLKLIEEDADSFSQRAELFYKKRPELISMVEDFYRTYRSLAERYDQLKSD 90
          +D     +LK+IE+D  S +++AE+    RP+LI+ +E+F   YRSLAERYD L ++
Sbjct: 1  MDQTASRVLKMIEQDGASLAKKAEMCKMTRPDLIAEIEEFCSLYRSLAERYDHLNAE 57