Jatropha Genome Database

JcCA0009632.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0009632.20 - phase: 0 /pseudo/partial
         (245 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008910 homeobox protein knotted-1, putative                    223   7e-59
30147.m013923 homeobox protein knotted-1, putative                    142   2e-34
29631.m001056 homeobox protein knotted-1, putative                    141   3e-34
30170.m013647 homeobox protein knotted-1, putative                    130   5e-31
29842.m003531 homeobox protein knotted-1, putative                    127   4e-30
30190.m011101 homeobox protein knotted-1, putative                     82   2e-16
29737.m001270 homeobox protein knotted-1, putative                     75   2e-14
29848.m004577 homeobox protein knotted-1, putative                     75   4e-14
30170.m014099 bel1 homeotic protein, putative                          61   6e-10
29973.m000390 bel1 homeotic protein, putative                          60   1e-09
30170.m014098 bel1 homeotic protein, putative                          60   1e-09
30131.m007089 bel1 homeotic protein, putative                          58   4e-09
30143.m001209 bel1 homeotic protein, putative                          56   1e-08
29638.m000515 bel1 homeotic protein, putative                          56   1e-08
29333.m001039 bel1 homeotic protein, putative                          55   4e-08
30190.m011257 bel1 homeotic protein, putative                          54   9e-08

>30128.m008910 homeobox protein knotted-1, putative
          Length = 327

 Score =  223 bits (568), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 107/152 (70%), Positives = 118/152 (77%)

Query: 93  FLADEAAGTSEEELSCGEIEASESQESSGGRPNDQDVKGMLMRKYSGYLSNXXXXXXXXX 152
           + +DEA GTSEEE+SCGEIEASES+ES G RP D D+KGML+RKYSGYLSN         
Sbjct: 174 YGSDEAVGTSEEEISCGEIEASESRESCGSRPVDPDLKGMLLRKYSGYLSNLRKEFLKKR 233

Query: 153 XXXXXXXXXXTILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKPS 212
                      ILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKPS
Sbjct: 234 KKGKLPKDARMILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKPS 293

Query: 213 EDMRFALMEGVSVSSSMIGGPSYFDTGGRVSG 244
           ED+R+ALMEGV+V  S+ G PSYFD+ G   G
Sbjct: 294 EDVRYALMEGVTVGGSIGGAPSYFDSRGGGDG 325


>30147.m013923 homeobox protein knotted-1, putative
          Length = 328

 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 65/130 (50%), Positives = 91/130 (70%), Gaps = 4/130 (3%)

Query: 94  LADEAAGTSEEELSCGEIEASESQESSGGRPNDQDVKGMLMRKYSGYLSNXXXXXXXXXX 153
           ++DEA G+S+E++S GE+EA +S  ++  R    ++K  L++KYSGY+S           
Sbjct: 195 VSDEAVGSSDEDISGGELEAQDSVRANEER----ELKDKLLQKYSGYISTLKQEFSKKKK 250

Query: 154 XXXXXXXXXTILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKPSE 213
                     ILL+WWN HY+WPYPTE +KV L++ TGLDQKQINNWFINQRKRHWKPSE
Sbjct: 251 KGKLPKEARQILLNWWNIHYKWPYPTEADKVALADATGLDQKQINNWFINQRKRHWKPSE 310

Query: 214 DMRFALMEGV 223
           +M+FA+++ +
Sbjct: 311 NMQFAVVDSI 320


>29631.m001056 homeobox protein knotted-1, putative
          Length = 337

 Score =  141 bits (355), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 66/131 (50%), Positives = 89/131 (67%), Gaps = 4/131 (3%)

Query: 94  LADEAAGTSEEELSCGEIEASESQESSGGRPNDQDVKGMLMRKYSGYLSNXXXXXXXXXX 153
           L+DE A +S+EELS GE+EA E+Q SS     D+D+K  L R++  ++S           
Sbjct: 204 LSDEGAPSSDEELSGGELEAQEAQPSS----KDRDLKDRLFRRFGSHISTLKLEFSKKKK 259

Query: 154 XXXXXXXXXTILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKPSE 213
                      LL+WWN HY+WPYPTE +K+ L++ TGLDQKQINNWFINQRKRHWKPSE
Sbjct: 260 KGKLPKEARQTLLEWWNVHYKWPYPTEADKIALADSTGLDQKQINNWFINQRKRHWKPSE 319

Query: 214 DMRFALMEGVS 224
           +M+FA+++ +S
Sbjct: 320 NMQFAVVDNIS 330


>30170.m013647 homeobox protein knotted-1, putative
          Length = 259

 Score =  130 bits (327), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 72/151 (47%), Positives = 89/151 (58%), Gaps = 12/151 (7%)

Query: 97  EAAGTSEEEL--SCGEIEASESQESSGGRPNDQDVKGMLMRKYSGYLSNXXXXXXXXXXX 154
           E  G+SEE+   S GE E  E       R  D+++K  L+RKYSGYLS+           
Sbjct: 112 EGVGSSEEDQDNSGGETELPEID----PRAEDRELKNHLLRKYSGYLSSLKQELSKKKKK 167

Query: 155 XXXXXXXXTILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKPSED 214
                     LL WW  HY+WPYP+E EKV L+E TGLDQKQINNWFINQRKRHWKPSED
Sbjct: 168 GKLPKEARQKLLSWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSED 227

Query: 215 MRFALMEGVSVSSSMIGGPSYFDTGGRVSGD 245
           M+F +M+G+   ++ +    Y D  G   GD
Sbjct: 228 MQFMVMDGLHPQNAAL----YMD--GHYMGD 252


>29842.m003531 homeobox protein knotted-1, putative
          Length = 353

 Score =  127 bits (319), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 61/129 (47%), Positives = 78/129 (60%), Gaps = 7/129 (5%)

Query: 95  ADEAAGTSEEELSCGEIEASESQESSGGRPNDQDVKGMLMRKYSGYLSNXXXXXXXXXXX 154
           A +  G+SEEE+           E       DQ++KG L+R+YSGYL +           
Sbjct: 209 ASDRNGSSEEEVDVNNNFIDPQAE-------DQELKGQLLRRYSGYLGSLKQEFMKKRKK 261

Query: 155 XXXXXXXXTILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKPSED 214
                     LLDWW+ HY+WPYP+E +K+ L+E TGLDQKQINNWFINQRKRHWKPSED
Sbjct: 262 GKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSED 321

Query: 215 MRFALMEGV 223
           M+F +M+  
Sbjct: 322 MQFVVMDAT 330


>30190.m011101 homeobox protein knotted-1, putative
          Length = 302

 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 1/117 (0%)

Query: 93  FLADEAAGTSEEELSCGEIEASESQESSGGRPNDQDVKGMLMRKYSGYLSNXXXXXXXXX 152
           F  D++     + +  G +  +ES+ S   R   Q++K  L + +   + +         
Sbjct: 171 FSLDQSGADGHDLMGFGPLLPTESERSLMERVR-QELKIELKQGFKSRIEDVREEILRKR 229

Query: 153 XXXXXXXXXXTILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHW 209
                     T+L +WW  H +WPYPTED+K KL E TGL  KQINNWFINQRKR+W
Sbjct: 230 RAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 286


>29737.m001270 homeobox protein knotted-1, putative
          Length = 374

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 39/50 (78%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKPS 212
           ++L  WW +H +WPYPTE++K +L + TGL  KQINNWFINQRKR+W  S
Sbjct: 275 SLLKAWWQSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSS 324


>29848.m004577 homeobox protein knotted-1, putative
          Length = 456

 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 38/47 (80%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHW 209
           ++L  WW +H +WPYPTE++K +L + TGL  KQINNWFINQRKR+W
Sbjct: 364 SVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 410


>30170.m014099 bel1 homeotic protein, putative
          Length = 469

 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 32/49 (65%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
           TIL  W   H+  PYP + EK+ L+  TGL + Q++NWFIN R R WKP
Sbjct: 383 TILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKP 431


>29973.m000390 bel1 homeotic protein, putative
          Length = 599

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 34/49 (69%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
           T+L  W   H+  PYPT+ +K+ L++ TGL + Q++NWFIN R R WKP
Sbjct: 389 TVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVRLWKP 437


>30170.m014098 bel1 homeotic protein, putative
          Length = 739

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 32/49 (65%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
           +IL  W   H+  PYP + EK+ L++ TGL + Q+ NWFIN R R WKP
Sbjct: 441 SILRAWLFEHFLHPYPNDSEKIMLAKQTGLSRNQVANWFINARVRLWKP 489


>30131.m007089 bel1 homeotic protein, putative
          Length = 677

 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 32/49 (65%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
           +IL  W   H+  PYP + +K+ L+  TGL + Q++NWFIN R R WKP
Sbjct: 411 SILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKP 459


>30143.m001209 bel1 homeotic protein, putative
          Length = 426

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 32/49 (65%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
            +L  W   H+  PYPT+ +K  L++ TGL + Q++NWFIN R R WKP
Sbjct: 238 ALLKTWLFEHFLHPYPTDSDKQILAQQTGLSRTQVSNWFINARVRLWKP 286


>29638.m000515 bel1 homeotic protein, putative
          Length = 864

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 31/49 (63%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
            IL  W   H+  PYPT+ +K  L+  TGL + Q++NWFIN R R WKP
Sbjct: 654 AILRAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKP 702


>29333.m001039 bel1 homeotic protein, putative
          Length = 679

 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 32/49 (65%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
           ++L  W   H+  PYP + +K  L++ TGL + Q++NWFIN R R WKP
Sbjct: 369 SVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKP 417


>30190.m011257 bel1 homeotic protein, putative
          Length = 698

 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 32/49 (65%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
           ++L  W   H+  PYP++ +K  L+  TGL + Q++NWFIN R R WKP
Sbjct: 450 SVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKP 498