Jatropha Genome Database

JcCA0008021.50
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0008021.50 + phase: 0 /pseudo/partial
         (137 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28623.m000395 lactoylglutathione lyase, putative                       87   2e-18

>28623.m000395 lactoylglutathione lyase, putative
          Length = 189

 Score = 87.4 bits (215), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 37/50 (74%), Positives = 44/50 (88%)

Query: 8   IHLIENPAINEFDIIVEPRPINPNNNHISLLCKNIGLVKRRLQERGIRYV 57
           IHLIENPA++EFD I+EPRPINP +NHIS  C ++GLVKRRLQE G+RYV
Sbjct: 63  IHLIENPALDEFDPIIEPRPINPKDNHISFQCTDVGLVKRRLQEMGMRYV 112