Jatropha Genome Database
- JcCA0004811.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0004811.10 + phase: 2 /partial
(910 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29993.m001063 ATP-dependent RNA helicase, putative 1335 0.0
29333.m001052 ATP-dependent RNA helicase, putative 347 2e-95
29660.m000778 ATP-dependent RNA helicase, putative 310 2e-84
29852.m002018 ATP-dependent RNA helicase, putative 303 3e-82
30110.m000732 ATP-dependent RNA helicase, putative 287 2e-77
30093.m000353 ATP-dependent RNA helicase, putative 273 2e-73
30170.m013734 ATP-dependent RNA helicase, putative 173 3e-43
29900.m001570 ATP-dependent RNA helicase, putative 162 5e-40
27632.m000168 ATP-dependent RNA helicase, putative 162 6e-40
29929.m004694 ATP-dependent RNA helicase, putative 157 2e-38
30076.m004617 ATP-dependent RNA helicase, putative 156 4e-38
28644.m000943 ATP-dependent RNA helicase, putative 154 3e-37
30174.m009095 ATP-dependent RNA helicase, putative 150 3e-36
29986.m001661 ATP-dependent RNA helicase, putative 134 2e-31
29838.m001636 ATP-dependent RNA helicase, putative 114 3e-25
29986.m001612 ATP-dependent RNA helicase, putative 99 7e-21
28094.m000177 ATP-dependent RNA helicase, putative 78 2e-14
29615.m000501 ATP-dependent RNA helicase, putative 54 3e-07
>29993.m001063 ATP-dependent RNA helicase, putative
Length = 1229
Score = 1335 bits (3454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 663/901 (73%), Positives = 736/901 (81%), Gaps = 45/901 (4%)
Query: 1 DILPSHPHLRLILMSATLDAARFSQYFGGCPIIRVPGFTYPVISFSRWSLTIYLISACKL 60
DILPS+PHLRLILMSATLD+ RFSQYFGGCPI+RVPGFTYPV
Sbjct: 334 DILPSYPHLRLILMSATLDSERFSQYFGGCPIVRVPGFTYPV------------------ 375
Query: 61 IYFCIVQVKTFYLEDVLSIIKSPDDNHIDSAMPGVPNKSPELTEEDKAALDEAINLAWTN 120
K FYLEDVLSI+ S D+NHIDSAMP +P KS EL EED+AA+DEAINLAWTN
Sbjct: 376 --------KNFYLEDVLSILNSADNNHIDSAMPSIPIKSHELREEDRAAVDEAINLAWTN 427
Query: 121 DEFDPLLDLVSSETNPNVYNYLDSLLGLTPLMVFAGKGRVVDVCMLLSFGVNCHLQDKDG 180
DEFD LLDLVSSE P VYN+ +S GL+PLMVFAGKGRV DVCMLLSF +CHLQDKDG
Sbjct: 428 DEFDTLLDLVSSEGIPEVYNFQESSTGLSPLMVFAGKGRVDDVCMLLSFNADCHLQDKDG 487
Query: 181 LTAMDWAKQENQQETAEVIKRHVESALTDSLKQQQLLDKYLEKINPELIDVVLIEQLLRK 240
LTA++WAK+ENQ ETAEV+KRHVE + TD +QQQLLD YL KINPEL+DV LIE+LLRK
Sbjct: 488 LTALEWAKRENQHETAEVLKRHVEVSPTDCREQQQLLDNYLGKINPELVDVSLIERLLRK 547
Query: 241 ICIDSKDGAILIFLPGWDGINKTRERLLANPFFKDSSKFVIISLHSMVPTMEQKKVFKRP 300
ICI S+DGAIL+FLPGWD I +TRE LLANPFFKDSSKF+IISLHSMVP+MEQKKVFKRP
Sbjct: 548 ICISSRDGAILVFLPGWDDIRRTREGLLANPFFKDSSKFLIISLHSMVPSMEQKKVFKRP 607
Query: 301 PQGCRKIILSTNIAESAITIDDVVYVIDSGRMKEKSYDPYQNVSTLHSNWVSKASARQRE 360
PQGCRKIILSTNIAE++ITIDDV+YVIDSGRMKEKSYDPY NVSTL S+WVSKAS++QRE
Sbjct: 608 PQGCRKIILSTNIAETSITIDDVIYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASSKQRE 667
Query: 361 GRAGRCQPGICYHLYSKLRAASLPDFQVPEIKRMPIEELCLQVKLLDPNYKIEDFLRKTL 420
GRAGRCQPG+CYHLYSKLRAAS+PDFQVPEI+RMPIEELCLQVKLLDPN KIE+FL K L
Sbjct: 668 GRAGRCQPGMCYHLYSKLRAASMPDFQVPEIRRMPIEELCLQVKLLDPNCKIEEFLGKML 727
Query: 421 DPPVPETIHNAITVLQDIGALSLDEQLTELGEKLGCLPVHPLTSKMLFFAILMNCLDPAL 480
DPPVPETI NAI VLQDIGALS DEQLTE+GEKLGCLPVHPL SKMLFFAILMNCLDPAL
Sbjct: 728 DPPVPETIRNAILVLQDIGALSPDEQLTEVGEKLGCLPVHPLISKMLFFAILMNCLDPAL 787
Query: 481 TLACASDYRDPFTLPVLPNEKKRAIAAKFEIASLYGGYSDQLAVIAAFECWKNAKARGQE 540
T+ACASDYRDPFTLPVLPNEKKRA A KFE+ASLYGG SDQLAVIAA+ECWKNAK RGQE
Sbjct: 788 TMACASDYRDPFTLPVLPNEKKRAAATKFELASLYGGRSDQLAVIAAYECWKNAKERGQE 847
Query: 541 LQFCSQYFISPGIMNMLDGMRKQLQAELIRNGFIEDGVSCCNLNAHDQGILHSVLVAGLY 600
+FCSQYFIS M ML GMRKQL +ELIRNGFI++ SCCN+N+HD GIL++VLVAGLY
Sbjct: 848 ARFCSQYFISSSTMIMLHGMRKQLLSELIRNGFIQEDASCCNVNSHDPGILYAVLVAGLY 907
Query: 601 PMVGRFLPPKNGKRFHIETAVGGAKVRLHPHSLNYNKLTFKKADDCPLIVYDEITRGDGG 660
PMVGR LPP+NGKRF +ETA GAKVRLHP SLN+ KL K DDC LI++DEITRG+ G
Sbjct: 908 PMVGRVLPPRNGKRFIVETAT-GAKVRLHPQSLNF-KLLSNKTDDCSLIIFDEITRGEWG 965
Query: 661 MHIRNCTIVGPLPLLLLATEIVVAPSKNXXXXXXXXXXXXXXXXXX--XXSDEDLMEVDE 718
M+IRNCTIVGPL LLLLATEIVV P+K+ DED ME+D+
Sbjct: 966 MNIRNCTIVGPLALLLLATEIVVTPAKDHDEEDNEGDDNNDGSDTAPEDEGDEDKMEIDD 1025
Query: 719 KSGGHNDKKIMSSPDNSVTTVVDRWLYFRSTALDVAQIYCLRERLSAAILFKVTHPRKTL 778
+ GGHND+KIMSSPDNSV VVDRWLYF STAL+VAQIYCLRERLSAAILF+V HP++ L
Sbjct: 1026 RLGGHNDEKIMSSPDNSVNVVVDRWLYFSSTALEVAQIYCLRERLSAAILFRVMHPKQEL 1085
Query: 779 PPALEASMYAIASVLSYDGLSGIPLPLESVDSLTSMVYATGIDNS-PGRREAMNQGPSNF 837
PPAL ASM A A VLSYDG SGI LP ESVDSL SMV AT ID++ PGRR+AM PS F
Sbjct: 1086 PPALAASMRATACVLSYDGQSGISLPQESVDSLASMVDATEIDSTAPGRRKAMGHNPSGF 1145
Query: 838 LKSLMSHGARQPAP-GYHIAKLPAFKGKSNGNESSSY-------------DQRPPLHAPT 883
L+SLMS+ +Q P Y A+LPAFKGKSN N+ S+ DQRPPL T
Sbjct: 1146 LRSLMSNRRQQTTPHHYRNARLPAFKGKSNINQPSTCKNTPPVSSLDKIPDQRPPLQGHT 1205
Query: 884 S 884
S
Sbjct: 1206 S 1206
>29333.m001052 ATP-dependent RNA helicase, putative
Length = 994
Score = 347 bits (889), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 200/470 (42%), Positives = 276/470 (58%), Gaps = 17/470 (3%)
Query: 221 LEKINPELIDVVLIEQLLRKICIDSKDGAILIFLPGWDGINKTRERLLANPFFKDSSKFV 280
LE + +D+ L+E + IC GAIL+FL GWD I+K +R+ N D SKF+
Sbjct: 473 LEAWSGSQLDLGLVEATIEYICRHEGGGAILVFLTGWDEISKLLDRVKGNKLLGDQSKFL 532
Query: 281 IISLHSMVPTMEQKKVFKRPPQGCRKIILSTNIAESAITIDDVVYVIDSGRMKEKSYDPY 340
++ LH +PT+ Q+++F RPP RKI+L+TNIAES+ITIDDVVYV+D G+ KE SYD
Sbjct: 533 VLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDAL 592
Query: 341 QNVSTLHSNWVSKASARQREGRAGRCQPGICYHLYSKLRAASLPDFQVPEIKRMPIEELC 400
++ L +W+SKASA QR GRAGR QPG+CY LY K+ ++ +Q+PEI R P++ELC
Sbjct: 593 NKLACLLPSWISKASAHQRRGRAGRVQPGVCYRLYPKIIHDAMLQYQLPEILRTPLQELC 652
Query: 401 LQVKLLDPNYKIEDFLRKTLDPPVPETIHNAITVLQDIGALSLDEQLTELGEKLGCLPVH 460
L +K L + FL K L PP P ++ NAI +L+ IGAL +E+LT LG L LP+
Sbjct: 653 LHIKSLQLG-AVGSFLAKALQPPDPLSVQNAIELLKTIGALDDNEELTPLGRHLCTLPLD 711
Query: 461 PLTSKMLFFAILMNCLDPALTLACASDYRDPFTLPVLPNEKKRAIAAKFEIASLYGGYSD 520
P KML + CL+PALT+A A +RDPF LP+ K A AAK A SD
Sbjct: 712 PNIGKMLLMGCVFQCLNPALTIASALAHRDPFVLPI--EMKNEADAAKQSFAG--DSCSD 767
Query: 521 QLAVIAAFECWKNAKARGQELQFCSQYFISPGIMNMLDGMRKQLQAELIRNGFIE--DGV 578
+A++ AFE + AK E FC + F+SP + M++ MR+Q L GF++ G
Sbjct: 768 HIALVKAFEGYMEAKCNRNERAFCWENFLSPITLRMMEDMREQFLNLLSDIGFVDKSKGA 827
Query: 579 SCCNLNAHDQGILHSVLVAGLYPMVGRFLPPKNGKRFHIETAVGGAKVRLHPHSLNYNKL 638
S N +HD ++ ++L AGLYP V + + GKR T G KV LHP S+N
Sbjct: 828 SAYNQYSHDLEMVSAILCAGLYPNVVQC--KRRGKRTAFYTKEVG-KVDLHPASVNAGIH 884
Query: 639 TFKKADDCPLIVYDEITRGDGGMHIRNCTIVGPLPLLLLATEIVVAPSKN 688
F P +VY E + G+ +R+ T + LLL ++ PSKN
Sbjct: 885 LFP----LPYMVYSEKVK-TTGIFVRDSTNISDYALLLFGGNLI--PSKN 927
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 1 DILPSHPHLRLILMSATLDAARFSQYFGGCPIIRVPGFTYPVISF 45
D+LP P LRLILMSAT++A FS+YFG P + +PG T+PV F
Sbjct: 366 DLLPRRPDLRLILMSATINADLFSKYFGNAPTMHIPGLTFPVTEF 410
>29660.m000778 ATP-dependent RNA helicase, putative
Length = 1172
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 177/490 (36%), Positives = 278/490 (56%), Gaps = 24/490 (4%)
Query: 200 KRHVESALTDSLKQQQLLD------KYLEKINPELIDVVLIEQLLRKICIDSKDGAILIF 253
K + SA+ ++L+ D + L NP+ I LIE LL IC + GA+L+F
Sbjct: 504 KSQIASAVEEALRAADFKDYSPQTQESLSCWNPDCIGFNLIEYLLCNICENEMPGAVLVF 563
Query: 254 LPGWDGINKTRERLLANPFFKDSSKFVIISLHSMVPTMEQKKVFKRPPQGCRKIILSTNI 313
+ GWD I+ +++L +P D S+ ++++ H + + EQ+ +F P G RKI+L+TNI
Sbjct: 564 MTGWDDISSLKDKLQVHPILGDPSRVLLLTCHGSMASSEQRLIFDEPNDGARKIVLATNI 623
Query: 314 AESAITIDDVVYVIDSGRMKEKSYDPYQNVSTLHSNWVSKASARQREGRAGRCQPGICYH 373
AE++ITI+DV++V+D G+ KE SYD N L +W+SK SA+QR GRAGR QPG CYH
Sbjct: 624 AETSITINDVIFVLDCGKAKESSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPGECYH 683
Query: 374 LYSKLRAASLPDFQVPEIKRMPIEELCLQVKLLDPNYKIEDFLRKTLDPPVPETIHNAIT 433
LY + + ++Q+PEI R P++ LCLQ+K L I +FL + L P + NA
Sbjct: 684 LYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLKLG-SISEFLSRALQSPELLAVQNANE 742
Query: 434 VLQDIGALSLDEQLTELGEKLGCLPVHPLTSKMLFFAILMNCLDPALTLACASDYRDPFT 493
L+ IGAL +E LT LG+ L P+ P KML + NCLDP LT+ RDPF
Sbjct: 743 YLKIIGALDQNENLTVLGKYLTMFPMQPKLGKMLILGAIFNCLDPVLTIVAGLSVRDPFL 802
Query: 494 LPVLPNEKKRAIAAKFEIASLYGGYSDQLAVIAAFECWKNAKARGQELQFCSQYFISPGI 553
P+ ++K A AAK + + YSD LA++ A+E WK+A+ +C + F+S
Sbjct: 803 TPM--DKKDLAEAAKSQFSC---DYSDHLALVRAYEGWKDAERNFAGYDYCWKNFLSMQS 857
Query: 554 MNMLDGMRKQLQAELIRNGFIEDGVSCCNLNAHDQGILHSVLVAGLYPMVGRFLPPKNGK 613
M +D +RK+ + L G ++ ++ CN +H++ ++ +V+ GLYP + + N K
Sbjct: 858 MKAIDSLRKEFLSLLKDAGLVDGSITFCNTWSHEEHLIRAVICYGLYPGICSVV--HNEK 915
Query: 614 RFHIETAVGGAKVRLHPHSLNY--NKLTFKKADDCPLIVYDEITRGDGGMHIRNCTIVGP 671
F ++T G +V L+ +S+N +K+ + P +V++E + + + +R+ T V
Sbjct: 916 SFSLKTMEDG-QVLLYSNSVNARESKIPY------PWLVFNEKIKVN-AVFLRDSTAVSD 967
Query: 672 LPLLLLATEI 681
LLL I
Sbjct: 968 SVLLLFGGSI 977
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 43/79 (54%), Gaps = 26/79 (32%)
Query: 1 DILPSHPHLRLILMSATLDAARFSQYFGGCPIIRVPGFTYPVISFSRWSLTIYLISACKL 60
D+LP P LRLILMSATLDA FS YF G PI+R+PGFTYP
Sbjct: 421 DLLPHRPDLRLILMSATLDAELFSSYFDGAPILRIPGFTYP------------------- 461
Query: 61 IYFCIVQVKTFYLEDVLSI 79
V+T YLED+L +
Sbjct: 462 -------VRTLYLEDILEM 473
>29852.m002018 ATP-dependent RNA helicase, putative
Length = 1129
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/455 (35%), Positives = 255/455 (56%), Gaps = 17/455 (3%)
Query: 226 PELIDVVLIEQLLRKICIDSKDGAILIFLPGWDGINKTRERLLANPFFKDSSKFVIISLH 285
P+ I LIE +L IC + G +L+F+ GW+ I+ R++L A+P D ++ ++++ H
Sbjct: 490 PDCIGFNLIEAVLCHICRKERPGGVLVFMTGWEDISCLRDQLKAHPLLGDPNRVLLLTCH 549
Query: 286 SMVPTMEQKKVFKRPPQGCRKIILSTNIAESAITIDDVVYVIDSGRMKEKSYDPYQNVST 345
+ T EQK +F+RPP RKI+L+TN+AE++ITI+D+V+V+D G+ KE +YD N
Sbjct: 550 GSMATSEQKLIFERPPSNVRKIVLATNMAEASITINDMVFVVDCGKAKETTYDALNNTPC 609
Query: 346 LHSNWVSKASARQREGRAGRCQPGICYHLYSKLRAASLPDFQVPEIKRMPIEELCLQVKL 405
L +W+S+ASA QR GRAGR QPG CYHLY K + ++Q+PE+ R P+ LCLQ+K
Sbjct: 610 LLPSWISQASACQRRGRAGRVQPGECYHLYPKCVYEAFAEYQLPELLRTPLNSLCLQIKS 669
Query: 406 LDPNYKIEDFLRKTLDPPVPETIHNAITVLQDIGALSLDEQLTELGEKLGCLPVHPLTSK 465
L I +FL L PP P + NAI L+ IGAL E LT LG+ L LPV P K
Sbjct: 670 LQVE-SIAEFLSAALQPPEPLAVQNAIGFLKMIGALDEKENLTNLGKFLSILPVDPKLGK 728
Query: 466 MLFFAILMNCLDPALTLACASDYRDPFTLPVLPNEKKRAIAAKFEIASLYGGYSDQLAVI 525
ML + C DP LT+ RDPF LP ++K+ +A + YSD +A++
Sbjct: 729 MLIMGAIFRCFDPVLTIVSGLSVRDPFLLP----QEKKDLAGTAKSRFSAKDYSDHMALV 784
Query: 526 AAFECWKNAKARGQELQFCSQYFISPGIMNMLDGMRKQLQAELIRNGFIEDGVSCCNLNA 585
A+E WK+A+ G ++C + F+S + + +RKQ L G ++ N +
Sbjct: 785 RAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIHSLRKQFSFILKEAGLVDADAGANNRLS 844
Query: 586 HDQGILHSVLVAGLYPMVGRFLPPKNGKRFHIETAVGGAKVRLHPHSLN--YNKLTFKKA 643
H+Q ++ +++ +GLYP + + + F + +V L+ +S+N Y + +
Sbjct: 845 HNQSLVRAIICSGLYPGIASVVHRETSMSFK---TMDDGQVLLYANSVNARYQTIPY--- 898
Query: 644 DDCPLIVYDEITRGDGGMHIRNCTIVGPLPLLLLA 678
P +V+ E + + + IR+ T V L+L
Sbjct: 899 ---PWLVFGEKVKVN-TVFIRDSTGVSDSILILFG 929
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 32/42 (76%)
Query: 1 DILPSHPHLRLILMSATLDAARFSQYFGGCPIIRVPGFTYPV 42
D+LP LRLILMSATL+A FS YFGG P I +PGFTYPV
Sbjct: 374 DLLPRRQDLRLILMSATLNAELFSNYFGGAPKIHIPGFTYPV 415
>30110.m000732 ATP-dependent RNA helicase, putative
Length = 1058
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 176/502 (35%), Positives = 284/502 (56%), Gaps = 23/502 (4%)
Query: 188 KQENQQETAEVIKRHVESALTDSLKQQQL------LDKYLEKINPELIDVVLIEQLLRKI 241
K + Q + K + SA+ D+L+ + L NP+ I LIE++L I
Sbjct: 414 KMQKQAQAFRKRKTQIASAVEDALEAANFKGYSLRTQESLSSWNPDSIGFNLIERVLCHI 473
Query: 242 CIDSKDGAILIFLPGWDGINKTRERLLANPFFKDSSKFVIISLHSMVPTMEQKKVFKRPP 301
+ GA+L+F+ GWD I+ +++L +P D S+ ++++ H + + EQ+ +F +P
Sbjct: 474 VKKERPGAVLVFMTGWDDISSLKDQLQTHPVLGDPSRILLLACHGSMDSSEQRLIFDKPK 533
Query: 302 QGCRKIILSTNIAESAITIDDVVYVIDSGRMKEKSYDPYQNVSTLHSNWVSKASARQREG 361
G KI+L+TN+AE++ITI D V+V+D G+ KE SYD N L +W+SKA+ARQR G
Sbjct: 534 DGVHKIVLATNMAETSITIPDAVFVVDCGKAKETSYDALNNTPCLLPSWISKAAARQRRG 593
Query: 362 RAGRCQPGICYHLYSKLRAASLPDFQVPEIKRMPIEELCLQVKLLDPNYKIEDFLRKTLD 421
RAGR QPG CYHLY + + D+Q+PE+ R P++ LCLQ+K L I +FL + L
Sbjct: 594 RAGRVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKSLQLG-SISEFLSRALQ 652
Query: 422 PPVPETIHNAITVLQDIGALSLDEQLTELGEKLGCLPVHPLTSKMLFFAILMNCLDPALT 481
PP P ++ NAI L+ IGAL +E LT LG L LPV P KML + NCLDP +T
Sbjct: 653 PPEPLSVQNAIEYLKVIGALDENENLTLLGRHLSMLPVEPKLGKMLILGAIFNCLDPVMT 712
Query: 482 LACASDYRDPFTLPVLPNEKKRAIAAKFEIASLYGGYSDQLAVIAAFECWKNAKARGQEL 541
+ RDPF +P ++K A +AK + ++ YSD LA++ AF+ WK+A+ +
Sbjct: 713 VVSGLSVRDPFLMPF--DKKDLAESAKAQFSA--RDYSDHLALVRAFDGWKDAERQQSGY 768
Query: 542 QFCSQYFISPGIMNMLDGMRKQLQAELIRNGFIEDGVSCCNLNAHDQGILHSVLVAGLYP 601
++C + F+S M +D +RKQ L G + C++ +HD+ ++ +++ AGL+P
Sbjct: 769 EYCWKNFLSAQTMRAIDALRKQFFYLLKDTGLLGQKTEDCSMLSHDEHLIRAIICAGLFP 828
Query: 602 MVGRFLPPKNGKRFHIETAVGGAKVRLHPHSLNYN--KLTFKKADDCPLIVYDEITRGDG 659
+ + + K ++T G +V LH +S+N K+ + P +V++E + +
Sbjct: 829 GICSVVNKE--KSITLKTMEDG-QVLLHSNSVNAGIPKIPY------PWLVFNEKVKVN- 878
Query: 660 GMHIRNCTIVGPLPLLLLATEI 681
+ +R+ + V LLL ++
Sbjct: 879 SVFLRDSSGVSDSVLLLFGGDL 900
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 33/42 (78%)
Query: 1 DILPSHPHLRLILMSATLDAARFSQYFGGCPIIRVPGFTYPV 42
D+LP P LRLILMSATL+A FS YFGG P + +PGFTYPV
Sbjct: 341 DLLPHRPELRLILMSATLNAELFSSYFGGAPTLHIPGFTYPV 382
>30093.m000353 ATP-dependent RNA helicase, putative
Length = 1509
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 190/536 (35%), Positives = 288/536 (53%), Gaps = 57/536 (10%)
Query: 195 TAEVIKRHVESALTDSLKQQQLLDKYLEKINPELIDVVLIEQLLRKICIDSKDGAILIFL 254
+ E+I H S+ S +Q K L++++ ++ID L+E L+ + +GAIL+FL
Sbjct: 863 SEEIINPHFVSSNYQSYSEQT--QKNLKRLDEDIIDYDLLEDLIFHVDQTYGEGAILVFL 920
Query: 255 PGWDGINKTRERLLANPFFKDSSKFVIISLHSMVPTMEQKKVFKRPPQGCRKIILSTNIA 314
PG I+ +RL+A+ F S ++ LHS + + +QKKVF RPP+ RK+I++TNIA
Sbjct: 921 PGMSEIHMLLDRLVASYRFGGPSSNWVLPLHSSIASTDQKKVFLRPPENIRKVIIATNIA 980
Query: 315 ESAITIDDVVYVIDSGRMKEKSYDPYQNVSTLHSNWVSKASARQREGRAGRCQPGICYHL 374
E++ITIDDVVYVID G+ KE Y+P + ++++ +W+S+A+ARQR GRAGR +PGIC+ L
Sbjct: 981 ETSITIDDVVYVIDCGKHKENRYNPQKKLTSMVEDWISQANARQRRGRAGRVKPGICFCL 1040
Query: 375 YSKLRAASLPD-FQVPEIKRMPIEELCLQVKLLDPNYKIEDFLRKTLDPPVPETIHNAIT 433
Y+ R L +QVPE+ RMP+ ELCLQ+K+L + I+ FL K L+PP E + +AI+
Sbjct: 1041 YTCHRFKKLMRPYQVPEMLRMPLVELCLQIKILSLGH-IKPFLSKALEPPRDEAMTSAIS 1099
Query: 434 VLQDIGALSLDEQLTELGEKLGCLPVHPLTSKMLFFAILMNCLDPALTLACASDYRDPFT 493
+L ++GA+ DE+LT LG L LPV L KM+ + + CL P L+++ Y+ PF
Sbjct: 1100 LLYEVGAIEGDEELTPLGHHLAKLPVDLLIGKMMLYGAIFGCLSPILSISAFLSYKSPFM 1159
Query: 494 LPVLPNEKKRAIAAKFEIAS--------LYGG--YSDQLAVIAAFECWKN---AKARGQE 540
P +EK+ AK + + L G SD + ++ A++ W N K
Sbjct: 1160 YP--KDEKQNVERAKLALLTDKVDGSNDLNHGDRQSDHIIMMVAYKKWDNILHEKGVKAA 1217
Query: 541 LQFCSQYFISPGIMNMLDGMRKQLQAELIRNGFIE--------------------DGVSC 580
QFCS YF+S +M+M+ MR Q L GFI D
Sbjct: 1218 QQFCSTYFLSNSVMHMIRDMRIQFGTLLADIGFINLPQNYQILGRNKEKFDGWLSDKSQP 1277
Query: 581 CNLNAHDQGILHSVLVAGLYPMV-----GRFLPPKNGKRFHIETAVGG--------AKVR 627
N +H I+ ++L AGLYP V G N + A+ G +V
Sbjct: 1278 FNTYSHHSSIVKAILCAGLYPNVAATQQGIIATAINSLKQSTIPAIKGYPVWYDGRREVH 1337
Query: 628 LHPHSLNYNKLTFKKADDCPLIVYDEITRGDGGMHIRNCTIVGPLPLLLLATEIVV 683
+HP S+N F+ P +V+ E + + +R+ TI+ P +LL I V
Sbjct: 1338 IHPSSINSKVKAFQH----PFLVFLEKVETN-KVFLRDTTIISPFSILLFGGFINV 1388
>30170.m013734 ATP-dependent RNA helicase, putative
Length = 1177
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 140/475 (29%), Positives = 233/475 (49%), Gaps = 41/475 (8%)
Query: 220 YLEKINPELIDVVLIEQLLRKICIDSKDGAILIFLPGWDGINKTRERLLA--NPFFKDSS 277
Y ++ + +D LI L +I + +G +L+FL G + I+ + L K+
Sbjct: 707 YTKQPESDYLDAALITVL--QIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVP 764
Query: 278 KFVIISLHSMVPTMEQKKVFKRPPQGCRKIILSTNIAESAITIDDVVYVIDSGRMKEKSY 337
+ +I+ ++S +P+ Q ++F+ P G RK++++TNIAE+++TID + YVID G K+ Y
Sbjct: 765 ELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY 824
Query: 338 DPYQNVSTLHSNWVSKASARQREGRAGRCQPGICYHLY--SKLRAASLPDFQVPEIKRMP 395
+P Q + +L +S+ASA+QR GRAGR PG CY LY S R P +PEI+R+
Sbjct: 825 NPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT-SIPEIQRIN 883
Query: 396 IEELCLQVKLLDPNYKIE-DFLRKTLDPPVPETIHNAITVLQDIGALSLDEQLTELGEKL 454
+ L +K + N + DF +DPP P+ + +A+ L +GAL + LT+LG K+
Sbjct: 884 LGFTTLTMKAMGINDLLSFDF----MDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKM 939
Query: 455 GCLPVHPLTSKMLFFAILMNCLDPALTLACASDYRDPFTLPVLPNEKKRAIAAKFEIASL 514
P+ P SKML ++ + C D LT+ + F P +++ A + A
Sbjct: 940 AEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRP-----REKQAQADQKRAKF 994
Query: 515 YGGYSDQLAVIAAFECWKNAKARGQELQFCSQYFISPGIMNMLDGMRKQLQAELIRNGFI 574
+ D L ++A +E WK G +C + F+ + +RKQL + I + +
Sbjct: 995 FQPEGDHLTLLAVYEAWKAKNFSG---PWCFENFVQSRSLRRAQDVRKQLLS--IMDKYK 1049
Query: 575 EDGVSCCNLNAHDQGILHSVLVAGLYPMVGRFLPPKNGKRFHIETAVGGAKVRLHPHSLN 634
D VS + + + AG + R P+ G R T V V +HP S
Sbjct: 1050 LDVVSA----GKNFTKIRKAITAGFFFHAAR-KDPQEGYR----TLVENQPVYIHPSS-- 1098
Query: 635 YNKLTFKKADDCPLIVYDEITRGDGGMHIRNCTIVGPLPLLLLATEI--VVAPSK 687
F++ D ++Y E+ ++R T++ P L+ LA V P+K
Sbjct: 1099 ---ALFQRQPDW--VIYHELVM-TTKEYMREVTVIDPKWLVELAPRFFKVADPTK 1147
>29900.m001570 ATP-dependent RNA helicase, putative
Length = 696
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 213/431 (49%), Gaps = 38/431 (8%)
Query: 248 GAILIFLPGWDGINKTRERLL--ANPFFKDSSKFVIISLHSMVPTMEQKKVFKRPPQGCR 305
G IL+FL G D I+ + L A K+SS +++ L+S + EQ VF P+G R
Sbjct: 276 GDILVFLTGQDDIDAAVQLLTEEAQVKGKNSSGLIVLPLYSGLSRAEQDLVFSPTPRGKR 335
Query: 306 KIILSTNIAESAITIDDVVYVIDSGRMKEKSYDPYQNVSTLHSNWVSKASARQREGRAGR 365
KI++STNIAE+++T++ +VYV+DSG K++ Y+P +V L +SKASARQR GRAGR
Sbjct: 336 KIVISTNIAETSLTMEGIVYVVDSGFSKQRFYNPISDVENLVVAPISKASARQRAGRAGR 395
Query: 366 CQPGICYHLYS-KLRAASLPDFQVPEIKRMPIEELCLQVKLLDPNYKIEDFLRKTLD--- 421
+PG CY LY+ + +P +PE++R + +Q+K L I++ L D
Sbjct: 396 VRPGKCYRLYTEEYFINEMPTQGIPEMQRSNLVSSVIQLKALG----IDNIL--GFDWPA 449
Query: 422 PPVPETIHNAITVLQDIGALSLDEQLTE-LGEKLGCLPVHPLTSKMLFFAILMNCLDPAL 480
P PE + A+ VL +G L D +LT +G ++ P+ P+ SKM+ + + C + +
Sbjct: 450 SPSPEAMIRALEVLYSLGILDDDAKLTSPVGFQVAESPLEPMISKMILSSNQLGCSEEII 509
Query: 481 TLACASDYRDPFTLPVLPNEKKRAIAAKFEIASLYGGYSDQLAVIAAFECWKNAKARGQE 540
T+A + ++ + +K AK A+ G + L V F G+
Sbjct: 510 TIAAVLSIQ---SIWISTRAQKELDEAKLRFAAAEGDHVTFLNVYQGF------LQSGKS 560
Query: 541 LQFCSQYFISPGIMNMLDGMRKQLQAELIRNGFIEDGVSCCNLNAHDQGILHSVLVAGLY 600
Q+C + F++ M + +R+QL+ +R G + + C D I+ + AG +
Sbjct: 561 SQWCHKNFVNYHAMKKVIEVREQLRRIALRIGIV---LKSCE---RDMLIVRKAVTAGFF 614
Query: 601 PMVGRFLPPKNGKRFHIETAVGGAKVRLHPHSLNYNKLTFKKADDCPLIVYDEITRGDGG 660
R + + +T G +V +HP S+ + + ++Y + D
Sbjct: 615 ANACRLEAFSHNGMY--KTVRGSQEVYIHPSSVLFRV-------NPKWVIYHSLVSTD-R 664
Query: 661 MHIRNCTIVGP 671
++RN + P
Sbjct: 665 QYMRNVITIDP 675
>27632.m000168 ATP-dependent RNA helicase, putative
Length = 1031
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 192/398 (48%), Gaps = 29/398 (7%)
Query: 240 KICIDSKDGAILIFLPGWDGINKTRERL--LANPFFKDSSKFVIISLHSMVPTMEQKKVF 297
+I + +G IL+FL G + I+ E L KD + +I+ ++S +P Q +F
Sbjct: 579 QIHLTEPEGDILLFLTGQEEIDCACESLDMKMKELGKDVPELIILPVYSALPGEMQSMIF 638
Query: 298 KRPPQGCRKIILSTNIAESAITIDDVVYVIDSGRMKEKSYDPYQNVSTLHSNWVSKASAR 357
+ PQG RK++++TNIAE+++TID + YV+D G MK+ Y+P V +L +S+ASA+
Sbjct: 639 EPAPQGKRKVVVATNIAETSLTIDGIFYVVDPGFMKQNLYNPKIGVDSLLVTPISQASAK 698
Query: 358 QREGRAGRCQPGICYHLY--SKLRAASLPDFQVPEIKRMPIEELCLQVKLLDPNYKIED- 414
QR GRAGR PG CY LY S R P PEI+R+ + L + + I D
Sbjct: 699 QRAGRAGRTGPGKCYRLYTESAFRNEMSPA-TTPEIQRIDLAYPTLTLMAMG----IRDL 753
Query: 415 FLRKTLDPPVPETIHNAITVLQDIGALSLDEQLTELGEKLGCLPVHPLTSKMLFFAILMN 474
F +DPP + + +A+ L +GAL + LT+ G + P+ P SKML +I +
Sbjct: 754 FSFDFMDPPSSQALISAMQQLYGLGALDYEGLLTKTGRLMAEFPLEPPLSKMLLASIDLG 813
Query: 475 CLDPALTLACASDYRDPFTLPVLPNEKKRAIAAKFEIASLYGGYSDQLAVIAAFECWKNA 534
C D LT+ + F P KK+ A A+ D L ++A + WK
Sbjct: 814 CSDEILTIIAMIQTGNIFYRP-----KKKQAQADQRRANFLHSEGDHLTLLAVYADWKE- 867
Query: 535 KARGQELQFCSQYFISPGIMNMLDGMRKQLQAELIRNGFIEDGVSCCNLNAHDQGILHSV 594
+G +CS+ F+ + +RKQL I + + D VS D +
Sbjct: 868 --KGFSAPWCSENFLQYRSLKRAQDVRKQLLT--IMDKYKLDVVSA----GKDSTKIRKA 919
Query: 595 LVAGLYPMVGRFLPPKNGKRFHIETAVGGAKVRLHPHS 632
+ AG + R P+ G R T V V +HP S
Sbjct: 920 IAAGFFFHAAR-RDPQGGYR----TLVSDQTVYIHPSS 952
>29929.m004694 ATP-dependent RNA helicase, putative
Length = 702
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/398 (31%), Positives = 186/398 (46%), Gaps = 23/398 (5%)
Query: 247 DGAILIFLPGWDGINK------TRERLLANPFFKDSSKFVIISLHSMVPTMEQKKVFKRP 300
+G ILIF+ G D I K R R L D+ +I+ LH +P Q +VF P
Sbjct: 213 EGDILIFMTGQDDIEKLVMKLEDRIRSLEEGSCMDA---IILPLHGSLPPDLQVRVFAPP 269
Query: 301 PQGCRKIILSTNIAESAITIDDVVYVIDSGRMKEKSYDPYQNVSTLHSNWVSKASARQRE 360
P CR+ I++TNIAE+++T+D VVYV+DSG +K++ Y+P + +L +SK A QR
Sbjct: 270 PPNCRRFIVATNIAETSLTVDGVVYVVDSGYVKQRQYNPSTGMYSLDVVQISKVQANQRA 329
Query: 361 GRAGRCQPGICYHLY-SKLRAASLPDFQVPEIKRMPIEELCLQVKLLD-PNYKIEDFLRK 418
GRAGR +PG CY LY S + D VPEI+R + L +K LD P+ I F
Sbjct: 330 GRAGRTRPGKCYRLYPSMVYEDDFLDVTVPEIQRSSLAGSVLYLKSLDLPDIDILKF--D 387
Query: 419 TLDPPVPETIHNAITVLQDIGALSLDEQLTELGEKLGCLPVHPLTSKMLFFAILMNCLDP 478
LDPP E++ +A+ L I A+ + +T +G + LP+ P S+ L A CL
Sbjct: 388 FLDPPSYESLEDALKQLYLIDAIDENGSITSVGRTMAELPLEPSLSRTLMEANENGCLSQ 447
Query: 479 ALTLACASDYRDPFTLPVLPNEKKRAIAAKFEIASLYG-GYSDQLAVIAAFECWKNAKAR 537
ALT+A +K+ FE G G D + ++ F W
Sbjct: 448 ALTVAAMLSAETTLLPSRSRTTEKKRKHTSFEFDLPDGCGLGDHIQLLQIFLDWDE---N 504
Query: 538 GQELQFCSQYFISPGIMNMLDGMRKQL--QAELIRNGFIEDGVSCCNLNAHDQGILHSVL 595
++ +C + + M + +RKQL + I G + D + C + L L
Sbjct: 505 DYDIDWCKENGLQVRGMKFVKDVRKQLCQIMQKIAKGSL-DVRAGCKKREEEYKNLRKAL 563
Query: 596 VAGLYPMVGRFLPPKNGKRFHIETAVGGAKVRLHPHSL 633
AG + + NG R V++HP S+
Sbjct: 564 CAGYANQLAERMVHHNGYR---TIGFKHQLVQVHPSSV 598
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 8 HLRLILMSATLDAARFSQYFGGCPIIRVPGFTYPV-ISFSRWSLTIYLISACK 59
+L++++ SATLD + S++F GCPI+ VPG YPV I +S+ T Y+ SA K
Sbjct: 150 NLKVLITSATLDGEKVSEFFSGCPILNVPGKLYPVEIMYSKERPTSYIESALK 202
>30076.m004617 ATP-dependent RNA helicase, putative
Length = 731
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 33/388 (8%)
Query: 248 GAILIFLPGWDGINKTRERLLA--NPFFKDSSKFVIISLHSMVPTMEQKKVFKRPPQ--- 302
G IL+FL G + I ++ + ++ L+S +P Q+K+F+ P
Sbjct: 282 GDILVFLTGEEEIEDACRKITKEISNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPLN 341
Query: 303 ----GCRKIILSTNIAESAITIDDVVYVIDSGRMKEKSYDPYQNVSTLHSNWVSKASARQ 358
RKI++STNIAE+++TID +VYVID G K+K Y+P V +L + +SKASA Q
Sbjct: 342 EGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 401
Query: 359 REGRAGRCQPGICYHLYS-KLRAASLPDFQVPEIKRMPIEELCLQVKLLDPNYKIEDFLR 417
R GRAGR QPG C+ LY+ K L PEI R + L +K L I+D +
Sbjct: 402 RSGRAGRTQPGKCFRLYTEKSFHQDLQPQTYPEILRSNLANTVLTLKKLG----IDDLVH 457
Query: 418 -KTLDPPVPETIHNAITVLQDIGALSLDEQLTELGEKLGCLPVHPLTSKMLFFAILMNCL 476
+DPP PET+ A+ +L +GAL D LT+LGE + P+ P +KML + NC
Sbjct: 458 FDFMDPPAPETLMRALEMLNYLGALDDDGNLTKLGEIMSEFPLDPQMAKMLVVSPEFNCS 517
Query: 477 DPALTLACASDYRDPFTLPVLPNEKKRAIAAKFEIASLYGGYSDQLAVIAAFECWKNAKA 536
+ L+++ + F P +K A AK + G D L ++ + +K
Sbjct: 518 NEILSVSAMLSVPNCFVRP--REAQKAADEAKARFGHIDG---DHLTLLNVYHAYKQ--- 569
Query: 537 RGQELQFCSQYFISPGIMNMLDGMRKQLQAELIRNGFIEDGVSCCNLNAHDQGI-LHSVL 595
++ +C + FI+ + D +R+QL + R + + N+ D + + +
Sbjct: 570 NNEDPSWCYENFINHRALKAADNVRQQLVRIMTRFNL---KLCSTDFNSRDYYVNIRKAM 626
Query: 596 VAGLYPMV------GRFLPPKNGKRFHI 617
+AG + V G +L K+ + H+
Sbjct: 627 LAGYFMQVAHLERTGHYLTVKDNQVVHL 654
>28644.m000943 ATP-dependent RNA helicase, putative
Length = 1269
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 204/414 (49%), Gaps = 36/414 (8%)
Query: 241 ICIDSKDGAILIFLPGWDGINKT----RERL--LANPFFKDSSKFVIISLHSMVPTMEQK 294
I I S G ILIF+ G D I ER+ L + K K +I+ ++S +P Q
Sbjct: 773 IHITSPPGDILIFMTGQDEIEAACYALAERIEQLISSTKKAVPKLLILPIYSQLPADLQA 832
Query: 295 KVFKRPPQGCRKIILSTNIAESAITIDDVVYVIDSGRMKEKSYDPYQNVSTLHSNWVSKA 354
K+F++ G RK I++TNIAE+++T+D + YVID+G K K Y+P + L VS+A
Sbjct: 833 KIFQKAEDGARKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSRA 892
Query: 355 SARQREGRAGRCQPGICYHLYSKLRAASLPDF---QVPEIKRMPIEELCLQVKLLDPNYK 411
+A QR GRAGR PG CY LY++ +A L + VPEI+R + + L +K L K
Sbjct: 893 AADQRAGRAGRTGPGTCYRLYTE--SAYLNEMLPSPVPEIQRTNLGNVVLLLKSL----K 946
Query: 412 IEDFLR-KTLDPPVPETIHNAITVLQDIGALSLDEQLTELGEKLGCLPVHPLTSKMLFFA 470
I++ L +DPP + I N++ L +GAL+ LT+LG K+ P+ P +KML
Sbjct: 947 IDNLLDFDFMDPPPQDNILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLMG 1006
Query: 471 ILMNCLDPALTLACASDYRDPFTLPVLPNEKKRAIAAKFEIASLYGGYSDQLAVIAAFEC 530
+ CL+ LT+ F P E+ A KF + SD L ++ +
Sbjct: 1007 EELGCLNEVLTIVSMLSVPSVFFRPKDRAEQSDAAREKFFVPE-----SDHLTLLNVYLQ 1061
Query: 531 WKNAKARGQELQFCSQYFISPGIMNMLDGMRKQLQAELIRNGFIEDGVSCCNLNAHDQGI 590
WK + RG +C+ +F+ + +R QL ++++ I ++ C HD +
Sbjct: 1062 WKEHQYRG---DWCNDHFLHVKGLRKAREVRSQL-LDILKTLKIP--LTSC---GHDWDV 1112
Query: 591 LHSVLVAGLY------PMVGRFLPPKNGKRFHIETAVGGAKVRLHPHSLNYNKL 638
+ + + + VG ++ +NG H+ + + P + Y++L
Sbjct: 1113 IRKAICSAYFHNAARLKGVGEYVNCRNGMPCHLHPSSALYGLGYTPEYVVYHEL 1166
>30174.m009095 ATP-dependent RNA helicase, putative
Length = 690
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 226/477 (47%), Gaps = 46/477 (9%)
Query: 221 LEKINPE--LIDVVLIEQLLRKICIDSKDGAILIFLPGWDGINKTRERLLANPFFK---D 275
L ++PE +D L+ L +I ++ G +L+FL G + I ERL+ +
Sbjct: 233 LYTVHPEKDYLDAALMT--LFQIHLEEAPGDVLVFLTGQEEIESV-ERLVQEKLQQLPEA 289
Query: 276 SSKFVIISLHSMVPTMEQKKVFKRPPQGCRKIILSTNIAESAITIDDVVYVIDSGRMKEK 335
K + + + S +P+ +Q +VF P G RK+IL+TNIAE+++TI + YVID G +K +
Sbjct: 290 KRKLLTVPIFSSLPSEQQMRVFMPTPPGHRKVILATNIAETSVTIPGIKYVIDPGLVKAR 349
Query: 336 SYDPYQNVSTLHSNWVSKASARQREGRAGRCQPGICYHLYSKLRAASLPDFQVPEIKRMP 395
SYDP + + +L SKA A QR GRAGR PG C+ LY + L D PEIKR
Sbjct: 350 SYDPVKGMESLVVVPTSKAQALQRSGRAGREGPGKCFRLYPEREFEKLEDSTKPEIKRCN 409
Query: 396 IEELCLQVKLLDPNYKIE-DFLRKTLDPPVPETIHNAITVLQDIGALSLDEQLTE-LGEK 453
+ + LQ+K L + I DF+ K P I ++ L +GAL+ + +L++ +G +
Sbjct: 410 LSNVILQLKALGVDDIIGFDFIEK----PSRAAIIKSLEHLFLLGALTDECKLSDPVGHQ 465
Query: 454 LGCLPVHPLTSKMLFFAILMNCLDPALTLACASDYRDPFTLPVLPNEKKRAIAAKFE--- 510
+ LP+ P+ SK L A NCL+ L F P +E+ R F
Sbjct: 466 MARLPLDPIYSKALILASQFNCLEEMLITVAMLSVESIFYAPREKSEESRTAMKCFSSPD 525
Query: 511 -----IASLYGGYSDQLAVIAAFEC--WKNAKARGQEL--QFCSQYFISPGIMNMLDGMR 561
+ S+Y +D+L E KN K +G+++ ++C + FI+ + +
Sbjct: 526 GDHLTLISVYRA-ADELLEKRKMELNNEKNFKGKGEKILRKWCKENFINGRSLRHARDIH 584
Query: 562 KQLQAELIRNGFIEDGVSCCNLNAHDQGILHSVLVAGLYPMVGRFLPPKNGKRFHIETAV 621
Q++ + + G VS C D + +A + + P R
Sbjct: 585 SQIRGHVEQMGL---RVSSCG----DDMLQFRRCLAASFFLNAALKQPDGTYR----ALA 633
Query: 622 GGAKVRLHPHSLNYNKLTFKKADDCPLIVYDEITRGDGGMHIRNCTIVGPLPLLLLA 678
G V++HP S + F+ +C ++++E+ + +IRN T + L L LA
Sbjct: 634 SGQTVQIHPFS-----VLFRSKAEC--VIFNELVQ-TSKKYIRNITRIDYLWLTELA 682
>29986.m001661 ATP-dependent RNA helicase, putative
Length = 868
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 115/192 (59%), Gaps = 5/192 (2%)
Query: 281 IISLHSMVPTMEQKKVFKRPPQGCRKIILSTNIAESAITIDDVVYVIDSGRMKEKSYDPY 340
++ L++M+P Q ++F +G R ++++TN+AE+++TI + YV+D+GR K K+Y+P
Sbjct: 259 VLPLYAMLPAAAQLRIFDEVKEGERLVVVATNVAETSLTIPAIKYVVDTGREKVKNYNPS 318
Query: 341 QNVSTLHSNWVSKASARQREGRAGRCQPGICYHLYSKLRAAS-LPDFQVPEIKRMPIEEL 399
+ T W+SKASA QR GRAGR PG CY LYS + LPDF EI ++P+E +
Sbjct: 319 NGMETYEIQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFNNILPDFSCAEISKVPLENI 378
Query: 400 CLQVKLLDPNYKIEDFLRKTLDPPVPETIHNAITVLQDIGALSLDEQLTELGEKLGCLPV 459
L +K + + K+E+F T PP + A L+ + AL + +LT LG+ + P+
Sbjct: 379 VLILKSM--SVKVENFPFPT--PPEANALKEAEDCLKILEALDENGRLTALGKAMSYFPM 434
Query: 460 HPLTSKMLFFAI 471
P S+ML I
Sbjct: 435 GPRHSRMLLTVI 446
>29838.m001636 ATP-dependent RNA helicase, putative
Length = 1588
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 155/326 (47%), Gaps = 30/326 (9%)
Query: 224 INPELIDVVLIEQLLRKICIDSKDGAILIFLPGWDGINKTRERLLANPFFKDSSKFVIIS 283
I P + DVV + + ++ K+G+IL FL + E+ +S + ++
Sbjct: 318 IAPYVSDVVKMAMEIHQV---EKEGSILAFLTSQLEVEWACEKF-------ESPSAIALA 367
Query: 284 LHSMVPTMEQKKVFKRPPQGCRKIILSTNIAESAITIDDVVYVIDSGRMKEKSYDPYQNV 343
LH + EQ +VF+ P G RK+I +TN+AE+++TI V +V+DSG +KE ++P +
Sbjct: 368 LHGRLSHEEQCRVFQNYP-GKRKVIFATNLAETSLTIPGVKFVVDSGLVKESRFEPTSGM 426
Query: 344 STLHSNWVSKASARQREGRAGRCQPGICYHLYSKLRAASLPDFQVPEIKRMPIEELCLQV 403
+ L + +S++SA QR GRAGR +PG CY LY + S+ Q PEI ++ + L++
Sbjct: 427 NVLRVSKISQSSANQRAGRAGRTEPGKCYRLYPEFDYQSMAFHQEPEICKVHLGIAVLRI 486
Query: 404 KLLDPNYKIE-DFLRKTLDPPVPETIHNAITVLQDIGALSLDE---QLTELGEKLGCLPV 459
L +E DF +D P E + AI L +GA++ +LT G L L +
Sbjct: 487 LSLGIKNVLEFDF----IDAPSAEAVDAAIRNLVQLGAVTCKNGTFELTMDGHYLVKLGI 542
Query: 460 HPLTSKMLFFAILMNCLDPALTLACA-SDYRDPFTLPVLPNEKKRAIAAKFEIASLYGGY 518
P K++ + + LA ++ F ++K ++ K + G
Sbjct: 543 EPRLGKIILDSCRHGLRKEGVVLAAVMANASSIFCRIGTNDDKLKSDCLKLQFCHQDGDL 602
Query: 519 SDQLAVIAAFE----------CWKNA 534
L V A+E CW N+
Sbjct: 603 FTLLTVYRAWEGISPDNRNKWCWNNS 628
>29986.m001612 ATP-dependent RNA helicase, putative
Length = 1025
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 22/263 (8%)
Query: 191 NQQETAEVIKRHVESALTDSLKQQQLLDKYLEKINPELIDVVL---IEQLLRKICIDSKD 247
NQQ + ++E +T S Q L KY +P ++ + + +L+ + + D
Sbjct: 207 NQQALFQRRVSYLEQEITCS---QVLATKYCSGPSPAMVSADIKPEVHKLIHDLVMHIHD 263
Query: 248 G------AILIFLPGWDGINKTRERLLANPFFKDSSKFVIISLHSMVPTMEQKKVFKRPP 301
IL+FLP + + ++ L P S F + LH + T EQ + +
Sbjct: 264 NEPDIEKGILVFLPTYHDL--LQQWYLLKPL---GSCFKVHILHGSIDT-EQALLAMKIW 317
Query: 302 QGCRKIILSTNIAESAITIDDVVYVIDSGRMKEKSYDPYQNVSTLHSNWVSKASARQREG 361
+ RK+IL+TNIAES++TI V YVIDS R + +D + WVSK+ A QR+G
Sbjct: 318 KSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDGTRKKDYAELVWVSKSQADQRKG 377
Query: 362 RAGRCQPGICYHLYSKLRAASLPDFQVPEIKRMPIEELCLQVKLLDPNYKIED---FLRK 418
R GR G Y L ++ L +++ P I R+ + + L V + I D L+K
Sbjct: 378 RTGRTCDGQIYRLVTRSFFNKLQEYESPAILRLSLRQQVLMVCCAESK-AINDPRVLLQK 436
Query: 419 TLDPPVPETIHNAITVLQDIGAL 441
TLDPP P I +A+ +L I AL
Sbjct: 437 TLDPPDPRVIEDALNLLVHIKAL 459
>28094.m000177 ATP-dependent RNA helicase, putative
Length = 600
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 23/155 (14%)
Query: 287 MVPTMEQKKVFKRPPQGCRK--IILSTNIAESAITIDDVVYVIDSGRMKEKSYDPYQNVS 344
M+P E+ +VF+ Q R+ ++ +TNIAE+++TI + ++D+GR K
Sbjct: 1 MLPAAEELRVFEEVLQKNREWLVVAATNIAETSLTIPGIKSIVDTGREK----------- 49
Query: 345 TLHSNWVSKASARQREGRAGRCQPGICYHLYSK-LRAASLPDFQVPEIKRMPIEELCLQV 403
W+ KASA QR G+AGR PG C LYS + +LPDF EI ++P++ L +
Sbjct: 50 -----WIRKASASQRAGKAGRTGPGHCCRLYSSVVFNYTLPDFSCAEISKVPLDSYILFL 104
Query: 404 KLLDPNYKIEDFLRKTLDPPVPETIHNAITVLQDI 438
+ + K+E F T PP + A L+++
Sbjct: 105 ESM--TMKVEKFPFPT--PPNTAALEEAKDCLKNL 135
>29615.m000501 ATP-dependent RNA helicase, putative
Length = 756
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 1 DILPSHPHLRLILMSATLDAARFSQYFGGCPIIRVPGFTYPV-ISFSRWSLTIYLISA 57
DI P L+L++ SATLDAA+FS YF PI ++PG +PV I +++ YL +A
Sbjct: 537 DIARFRPELKLLISSATLDAAKFSDYFDSAPIFKIPGRRFPVEIHYTKAPEADYLDAA 594