Jatropha Genome Database

JMS23C14r.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JMS23C14r.10 - phase: 0 /partial
         (167 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29757.m000730 aspartate kinase, putative                              235   8e-63

>29757.m000730 aspartate kinase, putative
          Length = 920

 Score =  235 bits (599), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 122/165 (73%), Positives = 136/165 (82%), Gaps = 14/165 (8%)

Query: 13  ISPLLLAVLLDESKEKVCIPRGDAWSVHKFGGTCVGTSERIKNVAEIIVNDGSEGKLVVV 72
           +S  + AVLLDESKEKV +P+G+ WSVHKFGGTCVGTS+RIKNVAEII+ND S+GKLVVV
Sbjct: 67  VSSSIKAVLLDESKEKVRLPKGNMWSVHKFGGTCVGTSDRIKNVAEIIINDVSQGKLVVV 126

Query: 73  SAMSKVTDMMYDLIYKAQSRDDSYIAAVDAVFEKHRLTAMDLLDGEDLASFLSRLHHDVN 132
           SAMSKVTDMMYDLI+KAQSRDDSYIAAVDAVFEKHR TAMDLLDG+DLASFLSRLHHDVN
Sbjct: 127 SAMSKVTDMMYDLIHKAQSRDDSYIAAVDAVFEKHRSTAMDLLDGDDLASFLSRLHHDVN 186

Query: 133 NLKAMLRAIYI-------------GIGPLF-LSLLDHTVRVNGFD 163
           NLKAMLRAIYI             G G L+   +L + VR +G D
Sbjct: 187 NLKAMLRAIYIAGHATESFTDFVVGHGELWSAQMLSYVVRKSGQD 231