Jatropha Genome Database
- JcSR479173f.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcSR479173f.10 + phase: 0 /partial
(64 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G16143.2 | Symbols: IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2... 103 3e-23
AT4G16143.1 | Symbols: IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2... 103 3e-23
AT4G02150.1 | Symbols: MOS6, ATIMPALPHA3, IMPA-3 | MOS6 (MODIFIE... 99 8e-22
AT1G09270.2 | Symbols: IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4... 98 1e-21
AT1G09270.1 | Symbols: IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4... 98 1e-21
AT3G06720.2 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA | IMPA-1 ... 92 8e-20
AT3G06720.1 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA, IMPA-1, ... 92 8e-20
AT1G09270.3 | Symbols: IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4... 91 2e-19
AT1G02690.1 | Symbols: IMPA-6 | IMPA-6 (IMPORTIN ALPHA ISOFORM 6... 87 2e-18
AT1G02690.2 | Symbols: IMPA-6 | IMPA-6 (IMPORTIN ALPHA ISOFORM 6... 87 2e-18
AT5G49310.1 | Symbols: IMPA-5 | IMPA-5 (IMPORTIN ALPHA ISOFORM 5... 71 2e-13
AT3G05720.1 | Symbols: IMPA-7 | IMPA-7 (IMPORTIN ALPHA ISOFORM 7... 58 1e-09
>AT4G16143.2 | Symbols: IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2);
binding / protein transporter | chr4:9134450-9137134
REVERSE
Length = 535
Score = 103 bits (256), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 54/62 (87%)
Query: 1 LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
LESLP MV GVWS++++ QLEATT FRKLLSIERSPPI EV+ AGVVPRF+EFL R D+P
Sbjct: 76 LESLPAMVGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAGVVPRFVEFLTREDYP 135
Query: 61 QL 62
QL
Sbjct: 136 QL 137
>AT4G16143.1 | Symbols: IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2);
binding / protein transporter | chr4:9134450-9137134
REVERSE
Length = 535
Score = 103 bits (256), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 54/62 (87%)
Query: 1 LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
LESLP MV GVWS++++ QLEATT FRKLLSIERSPPI EV+ AGVVPRF+EFL R D+P
Sbjct: 76 LESLPAMVGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAGVVPRFVEFLTREDYP 135
Query: 61 QL 62
QL
Sbjct: 136 QL 137
>AT4G02150.1 | Symbols: MOS6, ATIMPALPHA3, IMPA-3 | MOS6 (MODIFIER
OF SNC1, 6); binding / protein transporter |
chr4:950884-953602 REVERSE
Length = 531
Score = 98.6 bits (244), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 55/61 (90%)
Query: 2 ESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFPQ 61
++LP MVAG+WSE+ NSQLEAT RKLLSIE++PPINEVVQ+GVVPR ++FL+R+DFP+
Sbjct: 75 DNLPAMVAGIWSEDSNSQLEATNLLRKLLSIEQNPPINEVVQSGVVPRVVKFLSRDDFPK 134
Query: 62 L 62
L
Sbjct: 135 L 135
>AT1G09270.2 | Symbols: IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4);
binding / protein transporter | chr1:2994506-2997833
FORWARD
Length = 538
Score = 97.8 bits (242), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 55/62 (88%)
Query: 1 LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
LE +P+MV GV+S++ +QLEATT FRKLLSIERSPPI+EV++AGV+PRF+EFL R+D P
Sbjct: 78 LEGIPMMVQGVYSDDPQAQLEATTQFRKLLSIERSPPIDEVIKAGVIPRFVEFLGRHDHP 137
Query: 61 QL 62
QL
Sbjct: 138 QL 139
>AT1G09270.1 | Symbols: IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4);
binding / protein transporter | chr1:2994506-2997833
FORWARD
Length = 538
Score = 97.8 bits (242), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 55/62 (88%)
Query: 1 LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
LE +P+MV GV+S++ +QLEATT FRKLLSIERSPPI+EV++AGV+PRF+EFL R+D P
Sbjct: 78 LEGIPMMVQGVYSDDPQAQLEATTQFRKLLSIERSPPIDEVIKAGVIPRFVEFLGRHDHP 137
Query: 61 QL 62
QL
Sbjct: 138 QL 139
>AT3G06720.2 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA | IMPA-1
(IMPORTIN ALPHA ISOFORM 1); binding / protein
transporter | chr3:2120559-2123555 FORWARD
Length = 532
Score = 91.7 bits (226), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%)
Query: 1 LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
L+SL MVAGVWS++ QLE+TT FRKLLSIERSPPI EV+ AGVVPRF+EFL + D+P
Sbjct: 71 LDSLKDMVAGVWSDDPALQLESTTQFRKLLSIERSPPIEEVISAGVVPRFVEFLKKEDYP 130
Query: 61 QL 62
+
Sbjct: 131 AI 132
>AT3G06720.1 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA, IMPA-1,
IMPA1 | IMPA-1 (IMPORTIN ALPHA ISOFORM 1); binding /
protein transporter | chr3:2120559-2123555 FORWARD
Length = 532
Score = 91.7 bits (226), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%)
Query: 1 LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
L+SL MVAGVWS++ QLE+TT FRKLLSIERSPPI EV+ AGVVPRF+EFL + D+P
Sbjct: 71 LDSLKDMVAGVWSDDPALQLESTTQFRKLLSIERSPPIEEVISAGVVPRFVEFLKKEDYP 130
Query: 61 QL 62
+
Sbjct: 131 AI 132
>AT1G09270.3 | Symbols: IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM
4); binding / protein transporter |
chr1:2995162-2997833 FORWARD
Length = 456
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 51/57 (89%)
Query: 6 VMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFPQL 62
+MV GV+S++ +QLEATT FRKLLSIERSPPI+EV++AGV+PRF+EFL R+D PQL
Sbjct: 1 MMVQGVYSDDPQAQLEATTQFRKLLSIERSPPIDEVIKAGVIPRFVEFLGRHDHPQL 57
>AT1G02690.1 | Symbols: IMPA-6 | IMPA-6 (IMPORTIN ALPHA ISOFORM 6);
binding / protein transporter | chr1:584397-587036
FORWARD
Length = 538
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 53/62 (85%)
Query: 1 LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
LE++ M+AGV SE+++ QLEAT FR+LLSIER+PPINEVVQ+GVVP ++FL+R+DF
Sbjct: 75 LENIQQMIAGVMSEDRDLQLEATASFRRLLSIERNPPINEVVQSGVVPHIVQFLSRDDFT 134
Query: 61 QL 62
QL
Sbjct: 135 QL 136
>AT1G02690.2 | Symbols: IMPA-6 | IMPA-6 (IMPORTIN ALPHA ISOFORM 6);
binding / protein transporter | chr1:584397-587036
FORWARD
Length = 539
Score = 87.0 bits (214), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 53/62 (85%)
Query: 1 LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
LE++ M+AGV SE+++ QLEAT FR+LLSIER+PPINEVVQ+GVVP ++FL+R+DF
Sbjct: 75 LENIQQMIAGVMSEDRDLQLEATASFRRLLSIERNPPINEVVQSGVVPHIVQFLSRDDFT 134
Query: 61 QL 62
QL
Sbjct: 135 QL 136
>AT5G49310.1 | Symbols: IMPA-5 | IMPA-5 (IMPORTIN ALPHA ISOFORM 5);
binding / protein transporter | chr5:19992016-19994516
REVERSE
Length = 519
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 45/56 (80%)
Query: 7 MVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFPQL 62
M+ GV+S++ + QLE TT FR +LS +RSPP + V+++GVVPRF+EFL ++D P+L
Sbjct: 75 MITGVFSDDPSLQLEYTTRFRVVLSFDRSPPTDNVIKSGVVPRFVEFLKKDDNPKL 130
>AT3G05720.1 | Symbols: IMPA-7 | IMPA-7 (IMPORTIN ALPHA ISOFORM 7);
binding / protein transporter | chr3:1687992-1691736
REVERSE
Length = 528
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 7 MVAGVWSEEQNSQLEATTHFRKLLSIER-SPPINEVVQAGVVPRFIEFLARNDFPQL 62
+++ +WS+E++ +EATT R LL E + + EV+QAG+VPRF+EFL +D PQL
Sbjct: 64 LISCIWSDERDLLIEATTQIRTLLCGEMFNVRVEEVIQAGLVPRFVEFLTWDDSPQL 120