Jatropha Genome Database

JcSR397681f.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcSR397681f.10 - phase: 1 /partial
         (122 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G65110.2 | Symbols: ACX2, ATACX2 | ACX2 (ACYL-COA OXIDASE 2);...   223   2e-59
AT5G65110.1 | Symbols: ACX2, ATACX2 | ACX2 (ACYL-COA OXIDASE 2);...   222   3e-59

>AT5G65110.2 | Symbols: ACX2, ATACX2 | ACX2 (ACYL-COA OXIDASE 2);
           acyl-CoA oxidase | chr5:26010060-26012482 REVERSE
          Length = 646

 Score =  223 bits (569), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 102/115 (88%), Positives = 110/115 (95%)

Query: 1   EGEDHLRDPKFQLDAFRYRTSRLLQSVAVRLRKHSKSLGSFGAWNRCLNHLLTLAESHVE 60
           EGEDHLRDPKFQLDAFRYRTSRLLQ+VA RL+KHSK+LG FGAWNRCLNHLLTLAESH+E
Sbjct: 528 EGEDHLRDPKFQLDAFRYRTSRLLQNVAARLQKHSKTLGGFGAWNRCLNHLLTLAESHIE 587

Query: 61  SVILAKFIEAVQNCPDASSRAALKLVCDLYALDRIWNDIGTYRNVDYVAPNKAKV 115
           +VILAKFIEAV+NCPD S++AALKL CDLYALDRIW DIGTYRNVDYVAPNKAKV
Sbjct: 588 TVILAKFIEAVKNCPDPSAKAALKLACDLYALDRIWKDIGTYRNVDYVAPNKAKV 642


>AT5G65110.1 | Symbols: ACX2, ATACX2 | ACX2 (ACYL-COA OXIDASE 2);
           acyl-CoA oxidase | chr5:26009821-26012482 REVERSE
          Length = 692

 Score =  222 bits (566), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 101/114 (88%), Positives = 109/114 (95%)

Query: 1   EGEDHLRDPKFQLDAFRYRTSRLLQSVAVRLRKHSKSLGSFGAWNRCLNHLLTLAESHVE 60
           EGEDHLRDPKFQLDAFRYRTSRLLQ+VA RL+KHSK+LG FGAWNRCLNHLLTLAESH+E
Sbjct: 528 EGEDHLRDPKFQLDAFRYRTSRLLQNVAARLQKHSKTLGGFGAWNRCLNHLLTLAESHIE 587

Query: 61  SVILAKFIEAVQNCPDASSRAALKLVCDLYALDRIWNDIGTYRNVDYVAPNKAK 114
           +VILAKFIEAV+NCPD S++AALKL CDLYALDRIW DIGTYRNVDYVAPNKAK
Sbjct: 588 TVILAKFIEAVKNCPDPSAKAALKLACDLYALDRIWKDIGTYRNVDYVAPNKAK 641