Jatropha Genome Database

JcPR14IO7F0.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR14IO7F0.10 + phase: 2 /pseudo/partial/short
         (39 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G20630.1 | Symbols: UBP14, TTN6, ATUBP14 | UBP14 (UBIQUITIN-S...    50   4e-07

>AT3G20630.1 | Symbols: UBP14, TTN6, ATUBP14 | UBP14
           (UBIQUITIN-SPECIFIC PROTEASE 14); ubiquitin-specific
           protease | chr3:7203001-7208340 REVERSE
          Length = 797

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/26 (80%), Positives = 24/26 (92%)

Query: 1   YYMNQSLKTAFEMAPADPTVDLNMQL 26
           Y+ +QSLK AFEMAPADPT+DLNMQL
Sbjct: 336 YFSHQSLKMAFEMAPADPTLDLNMQL 361