Jatropha Genome Database

JcPR04G356P.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR04G356P.10 + phase: 0 /pseudo/partial
         (104 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G32270.1 | Symbols: ZIP3 | ZIP3; zinc ion transmembrane trans...    81   1e-16
AT2G04032.1 | Symbols: ZIP7 | ZIP7 (ZINC TRANSPORTER 7 PRECURSOR...    81   2e-16
AT1G05300.1 | Symbols: ZIP5 | ZIP5; cation transmembrane transpo...    78   1e-15
AT1G10970.1 | Symbols: ZIP4, ATZIP4 | ZIP4 (ZINC TRANSPORTER 4 P...    71   2e-13
AT4G19690.2 | Symbols: IRT1 | IRT1 (iron-regulated transporter 1...    69   6e-13
AT1G31260.1 | Symbols: ZIP10 | ZIP10 (ZINC TRANSPORTER 10 PRECUR...    68   1e-12
AT4G19680.2 | Symbols: IRT2 | IRT2; iron ion transmembrane trans...    67   2e-12
AT1G60960.1 | Symbols: IRT3 | IRT3; cation transmembrane transpo...    66   3e-12
AT3G12750.1 | Symbols: ZIP1 | ZIP1 (ZINC TRANSPORTER 1 PRECURSOR...    64   1e-11
AT4G33020.1 | Symbols: ZIP9, ATZIP9 | ZIP9; cation transmembrane...    64   3e-11
AT2G30080.1 | Symbols: ZIP6, ATZIP6 | ZIP6; cation transmembrane...    60   3e-10
AT5G62160.1 | Symbols: AtZIP12 | AtZIP12 (ZINC TRANSPORTER 12 PR...    57   2e-09

>AT2G32270.1 | Symbols: ZIP3 | ZIP3; zinc ion transmembrane
           transporter | chr2:13704278-13706612 FORWARD
          Length = 339

 Score = 80.9 bits (198), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 53/71 (74%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           + Q KFK  +V  M  FF++TTP GI +G+GI+  Y+ESSPTALIV+G+LN+AS+G    
Sbjct: 236 IAQGKFKCLSVTIMSTFFAITTPIGIVVGMGIANSYDESSPTALIVQGVLNAASAGILIY 295

Query: 72  WLLVDLLASDF 82
             LVDLLA+DF
Sbjct: 296 MSLVDLLAADF 306


>AT2G04032.1 | Symbols: ZIP7 | ZIP7 (ZINC TRANSPORTER 7 PRECURSOR);
           cation transmembrane transporter/ metal ion
           transmembrane transporter/ zinc ion transmembrane
           transporter | chr2:1289944-1291251 FORWARD
          Length = 365

 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 54/71 (76%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           ++QA+FKSK   TMV FFS+TTP GI +G+ I K+Y+E+SPTALIV G+LN+ S+G    
Sbjct: 262 ILQAQFKSKTNWTMVFFFSVTTPFGIVLGMAIQKIYDETSPTALIVVGVLNACSAGLLIY 321

Query: 72  WLLVDLLASDF 82
             LV+LLA +F
Sbjct: 322 MALVNLLAHEF 332


>AT1G05300.1 | Symbols: ZIP5 | ZIP5; cation transmembrane
           transporter/ metal ion transmembrane transporter |
           chr1:1545258-1547709 REVERSE
          Length = 360

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/73 (52%), Positives = 52/73 (71%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           + Q  F   ++  M IFFS+TTP GIA+G+ IS  Y++SSPTALIV+G+LN+AS+G    
Sbjct: 257 IAQGNFNCMSITIMSIFFSVTTPVGIAVGMAISSSYDDSSPTALIVQGVLNAASAGILIY 316

Query: 72  WLLVDLLASDFLE 84
             LVD LA+DF+ 
Sbjct: 317 MSLVDFLAADFMH 329


>AT1G10970.1 | Symbols: ZIP4, ATZIP4 | ZIP4 (ZINC TRANSPORTER 4
           PRECURSOR); cation transmembrane transporter/ copper ion
           transmembrane transporter | chr1:3665201-3666933 REVERSE
          Length = 408

 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 49/72 (68%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           + QA+F++K+   M  FF+LTTP GI IG  ++  +N  SP AL+ EG+L+S S+G    
Sbjct: 305 ISQAQFRNKSATIMACFFALTTPLGIGIGTAVASSFNSHSPGALVTEGILDSLSAGILVY 364

Query: 72  WLLVDLLASDFL 83
             LVDL+A+DFL
Sbjct: 365 MALVDLIAADFL 376


>AT4G19690.2 | Symbols: IRT1 | IRT1 (iron-regulated transporter 1);
           cadmium ion transmembrane transporter/ copper uptake
           transmembrane transporter/ iron ion transmembrane
           transporter/ manganese ion transmembrane transporter/
           zinc ion transmembrane transporter |
           chr4:10707487-10708723 FORWARD
          Length = 347

 Score = 68.9 bits (167), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 50/72 (69%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           ++QA++ +     M  FF++TTP GIA+GI +S VY ++SP ALI  GLLN+ S+G    
Sbjct: 244 ILQAEYTNMKKFVMAFFFAVTTPFGIALGIALSTVYQDNSPKALITVGLLNACSAGLLIY 303

Query: 72  WLLVDLLASDFL 83
             LVDLLA++F+
Sbjct: 304 MALVDLLAAEFM 315


>AT1G31260.1 | Symbols: ZIP10 | ZIP10 (ZINC TRANSPORTER 10
           PRECURSOR); cation transmembrane transporter/ metal ion
           transmembrane transporter | chr1:11175559-11177362
           REVERSE
          Length = 364

 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 50/72 (69%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           ++QA++     A M  FF++TTP G+ +G+ +SK Y E+SP +LI  GLLN++S+G    
Sbjct: 261 ILQAEYGWVKKAVMAFFFAVTTPFGVVLGMALSKTYKENSPESLITVGLLNASSAGLLIY 320

Query: 72  WLLVDLLASDFL 83
             LVDLLA+DF+
Sbjct: 321 MALVDLLAADFM 332


>AT4G19680.2 | Symbols: IRT2 | IRT2; iron ion transmembrane
           transporter/ zinc ion transmembrane transporter |
           chr4:10703385-10704621 FORWARD
          Length = 350

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 48/72 (66%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           ++QA F +     M  FF+ TTP GI +GI +S +Y ++SPTALI  GLLN+ S+G    
Sbjct: 247 ILQADFTNVKKFLMAFFFTGTTPCGIFLGIALSSIYRDNSPTALITIGLLNACSAGMLIY 306

Query: 72  WLLVDLLASDFL 83
             LVDLLA++F+
Sbjct: 307 MALVDLLATEFM 318


>AT1G60960.1 | Symbols: IRT3 | IRT3; cation transmembrane
           transporter/ metal ion transmembrane transporter |
           chr1:22445410-22447060 REVERSE
          Length = 425

 Score = 66.2 bits (160), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 48/72 (66%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           + QA+F++K+   M  FF+LTTP GI IG  ++  +N  S  AL+ EG+L+S S+G    
Sbjct: 322 ISQAQFRNKSATIMACFFALTTPIGIGIGTAVASSFNSHSVGALVTEGILDSLSAGILVY 381

Query: 72  WLLVDLLASDFL 83
             LVDL+A+DFL
Sbjct: 382 MALVDLIAADFL 393


>AT3G12750.1 | Symbols: ZIP1 | ZIP1 (ZINC TRANSPORTER 1 PRECURSOR);
           zinc ion transmembrane transporter |
           chr3:4051950-4053156 REVERSE
          Length = 355

 Score = 64.3 bits (155), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)

Query: 15  AKFKSKAVATMVIFFSLTTPSGIAIGIGISKV--YNESSPTALIVEGLLNSASSGS*FIW 72
           A  KSK+   M  FFS+T P GI IG+G+S    Y + S  A++VEG+LN+AS+G     
Sbjct: 253 ADMKSKSTVLMATFFSVTAPLGIGIGLGMSSGLGYRKESKEAIMVEGMLNAASAGILIYM 312

Query: 73  LLVDLLASDFL 83
            LVDLLA+DF+
Sbjct: 313 SLVDLLATDFM 323


>AT4G33020.1 | Symbols: ZIP9, ATZIP9 | ZIP9; cation transmembrane
           transporter/ metal ion transmembrane transporter |
           chr4:15932603-15934267 REVERSE
          Length = 344

 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 46/72 (63%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           V +A+   +  A M  FF++TTP G+A+G  I+  YN  S  AL+ EG+L+S S+G    
Sbjct: 241 VAEARLTPRGSAMMAFFFAITTPIGVAVGTAIASSYNSYSVAALVAEGVLDSLSAGILVY 300

Query: 72  WLLVDLLASDFL 83
             LVDL+A+DFL
Sbjct: 301 MALVDLIAADFL 312


>AT2G30080.1 | Symbols: ZIP6, ATZIP6 | ZIP6; cation transmembrane
           transporter/ metal ion transmembrane transporter |
           chr2:12838730-12840112 REVERSE
          Length = 341

 Score = 59.7 bits (143), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 2/75 (2%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGI--SKVYNESSPTALIVEGLLNSASSGS* 69
           + QA FK+  V  M + F++TTP GI +G+ I  +  Y++ +P ALI+EGLL S SSG  
Sbjct: 231 IAQAGFKAGTVVYMCLMFAVTTPLGIVLGMVIFAATGYDDQNPNALIMEGLLGSFSSGIL 290

Query: 70  FIWLLVDLLASDFLE 84
               LVDL+A DF  
Sbjct: 291 IYMALVDLIALDFFH 305


>AT5G62160.1 | Symbols: AtZIP12 | AtZIP12 (ZINC TRANSPORTER 12
           PRECURSOR); cation transmembrane transporter/ metal ion
           transmembrane transporter | chr5:24960107-24961263
           FORWARD
          Length = 355

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 50/70 (71%)

Query: 14  QAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FIWL 73
           +AKF+ K +  M++FF+LT P GI IGIG++++YNE+SP AL V G LN+ +SG      
Sbjct: 254 EAKFRVKKIWVMLMFFALTAPIGIGIGIGVAEIYNENSPMALKVSGFLNATASGILIYMA 313

Query: 74  LVDLLASDFL 83
           LVDL+A  F+
Sbjct: 314 LVDLVAPLFM 323