Jatropha Genome Database

JcPR03AS3LV.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR03AS3LV.10 + phase: 1 /pseudo/partial
         (96 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G23800.1 | Symbols: ALDH2B7, ALDH2B | ALDH2B7; 3-chloroallyl ...    80   3e-16
AT3G48000.1 | Symbols: ALDH2B4, ALDH2, ALDH2A | ALDH2B4 (ALDEHYD...    74   2e-14
AT3G24503.1 | Symbols: ALDH2C4, ALDH1A, REF1 | ALDH2C4; 3-chloro...    51   2e-07

>AT1G23800.1 | Symbols: ALDH2B7, ALDH2B | ALDH2B7; 3-chloroallyl
           aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD) |
           chr1:8412238-8414804 REVERSE
          Length = 534

 Score = 79.7 bits (195), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 51/76 (67%)

Query: 18  RDLGEVIHRANSTRYGLAAGVFTQNIDTANILTRALRVGTVWIN*L*CVRRCDSFWWI*D 77
           +DL EVI RAN++RYGLAAGVFTQN+DTA+ L RALRVGTVWIN    +     F     
Sbjct: 444 KDLDEVIARANNSRYGLAAGVFTQNLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKM 503

Query: 78  EWTWKREGYYSLANYL 93
               + +G YSL NYL
Sbjct: 504 SGIGREKGIYSLNNYL 519


>AT3G48000.1 | Symbols: ALDH2B4, ALDH2, ALDH2A | ALDH2B4 (ALDEHYDE
           DEHYDROGENASE 2B4); 3-chloroallyl aldehyde
           dehydrogenase/ ATP binding / aldehyde dehydrogenase
           (NAD) | chr3:17717082-17719843 REVERSE
          Length = 538

 Score = 73.9 bits (180), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/75 (50%), Positives = 48/75 (64%)

Query: 19  DLGEVIHRANSTRYGLAAGVFTQNIDTANILTRALRVGTVWIN*L*CVRRCDSFWWI*DE 78
           D+ EVI RAN T+YGLAAGVFT+N+DTAN ++RAL+ GTVW+N          F      
Sbjct: 449 DVDEVIKRANETKYGLAAGVFTKNLDTANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMS 508

Query: 79  WTWKREGYYSLANYL 93
              + +G YSL NYL
Sbjct: 509 GNGREKGIYSLNNYL 523


>AT3G24503.1 | Symbols: ALDH2C4, ALDH1A, REF1 | ALDH2C4;
           3-chloroallyl aldehyde dehydrogenase/ aldehyde
           dehydrogenase (NAD)/ coniferyl-aldehyde dehydrogenase |
           chr3:8919732-8923029 REVERSE
          Length = 501

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 43/64 (67%), Gaps = 9/64 (14%)

Query: 6   DLEVY--------INVRKFCRDLGEVIHRANSTRYGLAAGVFTQNIDTANILTRALRVGT 57
           D+++Y        +++ KF + + E I  AN+T+YGLAAG+ +Q+ID  N ++R+++ G 
Sbjct: 392 DMKIYQDEIFGPVMSLMKF-KTVEEGIKCANNTKYGLAAGILSQDIDLINTVSRSIKAGI 450

Query: 58  VWIN 61
           +W+N
Sbjct: 451 IWVN 454