Jatropha Genome Database

JcPR03AIW3S.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR03AIW3S.10 - phase: 1 /partial
         (90 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G16500.1 | Symbols: ADC1, ARGDC1, ARGDC, SPE1 | ADC1 (ARGININ...    95   8e-21
AT4G34710.2 | Symbols: ADC2, SPE2, ATADC2 | ADC2 (ARGININE DECAR...    84   2e-17
AT4G34710.1 | Symbols: ADC2, SPE2, ATADC2 | ADC2 (ARGININE DECAR...    84   2e-17

>AT2G16500.1 | Symbols: ADC1, ARGDC1, ARGDC, SPE1 | ADC1 (ARGININE
           DECARBOXYLASE 1); arginine decarboxylase |
           chr2:7150796-7152904 REVERSE
          Length = 702

 Score = 95.1 bits (235), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 4/88 (4%)

Query: 2   IVSHHSILIFEXXXXXXXXXXXXXXXXGFQYFVDGLTEDAISDYRNLTSAAMRGENDTCL 61
           IVSHHS+LIFE                  Q+ ++G +E+   DY NL  AAMRG+ ++CL
Sbjct: 379 IVSHHSVLIFEAVSAGQQHETPTDH----QFMLEGYSEEVRGDYENLYGAAMRGDRESCL 434

Query: 62  LYADQLKQRCVDQFKEGSIGMEQLAAVD 89
           LY DQLKQRCV+ FKEGS+G+EQLA VD
Sbjct: 435 LYVDQLKQRCVEGFKEGSLGIEQLAGVD 462


>AT4G34710.2 | Symbols: ADC2, SPE2, ATADC2 | ADC2 (ARGININE
           DECARBOXYLASE 2); arginine decarboxylase |
           chr4:16560315-16562450 REVERSE
          Length = 711

 Score = 84.0 bits (206), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/88 (47%), Positives = 59/88 (67%), Gaps = 2/88 (2%)

Query: 2   IVSHHSILIFEXXXXXXXXXXXXXXXXGFQYFVDGLTEDAISDYRNLTSAAMRGENDTCL 61
           IVSHHS+LIFE                  Q+ ++G  E+A ++Y +L +A MRG++++CL
Sbjct: 390 IVSHHSVLIFEAVSADKPMVHQATPGD-IQFLLEG-NEEARANYEDLYAAVMRGDHESCL 447

Query: 62  LYADQLKQRCVDQFKEGSIGMEQLAAVD 89
           LY DQLKQRCV+ FKEG + +EQLA+VD
Sbjct: 448 LYVDQLKQRCVEGFKEGVLSIEQLASVD 475


>AT4G34710.1 | Symbols: ADC2, SPE2, ATADC2 | ADC2 (ARGININE
           DECARBOXYLASE 2); arginine decarboxylase |
           chr4:16560315-16562450 REVERSE
          Length = 711

 Score = 84.0 bits (206), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/88 (47%), Positives = 59/88 (67%), Gaps = 2/88 (2%)

Query: 2   IVSHHSILIFEXXXXXXXXXXXXXXXXGFQYFVDGLTEDAISDYRNLTSAAMRGENDTCL 61
           IVSHHS+LIFE                  Q+ ++G  E+A ++Y +L +A MRG++++CL
Sbjct: 390 IVSHHSVLIFEAVSADKPMVHQATPGD-IQFLLEG-NEEARANYEDLYAAVMRGDHESCL 447

Query: 62  LYADQLKQRCVDQFKEGSIGMEQLAAVD 89
           LY DQLKQRCV+ FKEG + +EQLA+VD
Sbjct: 448 LYVDQLKQRCVEGFKEGVLSIEQLASVD 475