Jatropha Genome Database

JcPR02JBVLC.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR02JBVLC.10 - phase: 2 /pseudo/partial
         (55 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G32180.1 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2)...    59   9e-10
AT4G32180.3 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2)...    58   1e-09
AT4G32180.2 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2)...    58   1e-09

>AT4G32180.1 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2);
           pantothenate kinase | chr4:15537724-15543715 REVERSE
          Length = 901

 Score = 58.5 bits (140), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/44 (65%), Positives = 31/44 (70%)

Query: 1   LMEEPAAYGKLGLANXXXXXXXXXXXFQFVDAYRSIKQRXSQFS 44
           LMEEPAAYGKLGLAN           FQFVDAYRSIKQR ++ S
Sbjct: 593 LMEEPAAYGKLGLANLLELREECLREFQFVDAYRSIKQRENEAS 636


>AT4G32180.3 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2);
           pantothenate kinase | chr4:15538340-15543715 REVERSE
          Length = 783

 Score = 58.2 bits (139), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/44 (65%), Positives = 31/44 (70%)

Query: 1   LMEEPAAYGKLGLANXXXXXXXXXXXFQFVDAYRSIKQRXSQFS 44
           LMEEPAAYGKLGLAN           FQFVDAYRSIKQR ++ S
Sbjct: 593 LMEEPAAYGKLGLANLLELREECLREFQFVDAYRSIKQRENEAS 636


>AT4G32180.2 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2);
           pantothenate kinase | chr4:15538340-15543715 REVERSE
          Length = 783

 Score = 58.2 bits (139), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/44 (65%), Positives = 31/44 (70%)

Query: 1   LMEEPAAYGKLGLANXXXXXXXXXXXFQFVDAYRSIKQRXSQFS 44
           LMEEPAAYGKLGLAN           FQFVDAYRSIKQR ++ S
Sbjct: 593 LMEEPAAYGKLGLANLLELREECLREFQFVDAYRSIKQRENEAS 636