Jatropha Genome Database
- JcPR02GZLT5.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcPR02GZLT5.10 + phase: 0 /pseudo/partial
(74 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G47900.2 | Symbols: AtTLP3 | AtTLP3 (TUBBY LIKE PROTEIN 3); p... 78 1e-15
AT2G47900.1 | Symbols: AtTLP3 | AtTLP3 (TUBBY LIKE PROTEIN 3); p... 78 1e-15
AT3G06380.1 | Symbols: ATTLP9, TLP9 | ATTLP9 (TUBBY-LIKE PROTEIN... 67 2e-12
AT5G18680.1 | Symbols: AtTLP11 | AtTLP11 (TUBBY LIKE PROTEIN 11)... 61 2e-10
AT1G43640.1 | Symbols: AtTLP5 | AtTLP5 (TUBBY LIKE PROTEIN 5); p... 58 9e-10
AT1G53320.1 | Symbols: AtTLP7 | AtTLP7 (TUBBY LIKE PROTEIN 7); p... 57 2e-09
AT1G76900.2 | Symbols: AtTLP1 | AtTLP1 (TUBBY LIKE PROTEIN 1); p... 57 2e-09
AT1G76900.1 | Symbols: AtTLP1 | AtTLP1 (TUBBY LIKE PROTEIN 1); p... 57 2e-09
AT1G25280.1 | Symbols: AtTLP10 | AtTLP10 (TUBBY LIKE PROTEIN 10)... 55 1e-08
AT1G25280.3 | Symbols: AtTLP10 | AtTLP10 (TUBBY LIKE PROTEIN 10)... 54 1e-08
AT1G25280.2 | Symbols: AtTLP10 | AtTLP10 (TUBBY LIKE PROTEIN 10)... 54 1e-08
>AT2G47900.2 | Symbols: AtTLP3 | AtTLP3 (TUBBY LIKE PROTEIN 3);
phosphoric diester hydrolase/ transcription factor |
chr2:19611196-19612766 REVERSE
Length = 406
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 42/42 (100%)
Query: 33 KSRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
++RS+R++++KQVSPR+P+GNYPVAH+SYELNVLGSRGPRRM
Sbjct: 213 RTRSSRLLSLKQVSPRIPSGNYPVAHISYELNVLGSRGPRRM 254
>AT2G47900.1 | Symbols: AtTLP3 | AtTLP3 (TUBBY LIKE PROTEIN 3);
phosphoric diester hydrolase/ transcription factor |
chr2:19611196-19612766 REVERSE
Length = 406
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 42/42 (100%)
Query: 33 KSRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
++RS+R++++KQVSPR+P+GNYPVAH+SYELNVLGSRGPRRM
Sbjct: 213 RTRSSRLLSLKQVSPRIPSGNYPVAHISYELNVLGSRGPRRM 254
>AT3G06380.1 | Symbols: ATTLP9, TLP9 | ATTLP9 (TUBBY-LIKE PROTEIN
9); phosphoric diester hydrolase/ protein binding /
transcription factor | chr3:1936384-1938028 FORWARD
Length = 380
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
Query: 25 QILEPKFLKSRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
Q K KSRS+ N +VSPRVP G+YP+AH+SYELNVLGSRGPRRM
Sbjct: 185 QTGAAKMQKSRSS---NFIKVSPRVPQGSYPIAHISYELNVLGSRGPRRM 231
>AT5G18680.1 | Symbols: AtTLP11 | AtTLP11 (TUBBY LIKE PROTEIN 11);
phosphoric diester hydrolase/ transcription factor |
chr5:6228358-6230426 REVERSE
Length = 389
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 33 KSRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
K R +R N +VS +VP G+YPVAH++YELNVLGSRGPR+M
Sbjct: 199 KLRKSRSYNPAKVSAKVPLGSYPVAHITYELNVLGSRGPRKM 240
>AT1G43640.1 | Symbols: AtTLP5 | AtTLP5 (TUBBY LIKE PROTEIN 5);
phosphoric diester hydrolase/ transcription factor |
chr1:16439619-16441253 REVERSE
Length = 429
Score = 58.2 bits (139), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
Query: 25 QILEPKFLKSRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
QIL P +R N K+VSP+VP+G+Y +A V+YELN+LG+RGPRRM
Sbjct: 213 QILSPP----NRSRSFNSKKVSPKVPSGSYNIAQVTYELNLLGTRGPRRM 258
>AT1G53320.1 | Symbols: AtTLP7 | AtTLP7 (TUBBY LIKE PROTEIN 7);
phosphoric diester hydrolase/ transcription factor |
chr1:19891237-19893429 REVERSE
Length = 379
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 35 RSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
+++R KQ+SP+VPAGN+ V HVSY+ N+L SRGPRRM
Sbjct: 206 KASRRFASKQISPQVPAGNFEVGHVSYKFNLLKSRGPRRM 245
>AT1G76900.2 | Symbols: AtTLP1 | AtTLP1 (TUBBY LIKE PROTEIN 1);
phosphoric diester hydrolase/ transcription factor |
chr1:28882741-28884377 FORWARD
Length = 455
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 43 KQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
K+VSP+VP+G+Y +A VSYELNVLG+RGPRRM
Sbjct: 231 KRVSPKVPSGSYKIAQVSYELNVLGTRGPRRM 262
>AT1G76900.1 | Symbols: AtTLP1 | AtTLP1 (TUBBY LIKE PROTEIN 1);
phosphoric diester hydrolase/ transcription factor |
chr1:28882741-28884377 FORWARD
Length = 455
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 43 KQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
K+VSP+VP+G+Y +A VSYELNVLG+RGPRRM
Sbjct: 231 KRVSPKVPSGSYKIAQVSYELNVLGTRGPRRM 262
>AT1G25280.1 | Symbols: AtTLP10 | AtTLP10 (TUBBY LIKE PROTEIN 10);
phosphoric diester hydrolase/ transcription factor |
chr1:8864961-8866608 FORWARD
Length = 445
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 30/32 (93%)
Query: 43 KQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
++VSP+VP+G+Y +A ++YELNVLG+RGPRRM
Sbjct: 233 RRVSPKVPSGSYNIAQITYELNVLGTRGPRRM 264
>AT1G25280.3 | Symbols: AtTLP10 | AtTLP10 (TUBBY LIKE PROTEIN 10);
phosphoric diester hydrolase/ transcription factor |
chr1:8865676-8866608 FORWARD
Length = 267
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 30/32 (93%)
Query: 43 KQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
++VSP+VP+G+Y +A ++YELNVLG+RGPRRM
Sbjct: 55 RRVSPKVPSGSYNIAQITYELNVLGTRGPRRM 86
>AT1G25280.2 | Symbols: AtTLP10 | AtTLP10 (TUBBY LIKE PROTEIN 10);
phosphoric diester hydrolase/ transcription factor |
chr1:8865676-8866608 FORWARD
Length = 267
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 30/32 (93%)
Query: 43 KQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
++VSP+VP+G+Y +A ++YELNVLG+RGPRRM
Sbjct: 55 RRVSPKVPSGSYNIAQITYELNVLGTRGPRRM 86