Jatropha Genome Database

JcPR01DAKSA.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR01DAKSA.10 + phase: 0 /partial
         (67 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G22400.1 | Symbols: LOX5 | LOX5; electron carrier/ iron ion b...   104   1e-23
AT1G55020.1 | Symbols: LOX1 | LOX1; lipoxygenase | chr1:20525798...    96   3e-21
AT1G72520.1 | Symbols:  | lipoxygenase, putative | chr1:27308611...    60   2e-10
AT1G17420.1 | Symbols: LOX3 | LOX3; electron carrier/ iron ion b...    60   2e-10
AT1G67560.1 | Symbols:  | lipoxygenase family protein | chr1:253...    51   1e-07
AT3G45140.1 | Symbols: LOX2, ATLOX2 | LOX2 (LIPOXYGENASE 2); lip...    49   5e-07

>AT3G22400.1 | Symbols: LOX5 | LOX5; electron carrier/ iron ion
           binding / lipoxygenase/ metal ion binding /
           oxidoreductase, acting on single donors with
           incorporation of molecular oxygen, incorporation of two
           atoms of oxygen | chr3:7927011-7931167 FORWARD
          Length = 886

 Score =  104 bits (259), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/66 (72%), Positives = 55/66 (83%)

Query: 1   LKADETLKPLAIELSLPHPEGDQFGAVSKVCTPAEDGVEGSIWLLAKAYVGVVDSGVHQL 60
           L+AD TLKPLAIELSLPH +G+ +G+VSKV TPAE GVEGS+W LAKAY  V DSG HQL
Sbjct: 480 LQADGTLKPLAIELSLPHAQGESYGSVSKVFTPAEKGVEGSVWQLAKAYAAVNDSGYHQL 539

Query: 61  ISHWYE 66
           ISHW +
Sbjct: 540 ISHWLQ 545


>AT1G55020.1 | Symbols: LOX1 | LOX1; lipoxygenase |
           chr1:20525798-20530143 FORWARD
          Length = 859

 Score = 96.3 bits (238), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/66 (72%), Positives = 53/66 (80%), Gaps = 1/66 (1%)

Query: 1   LKADETLKPLAIELSLPHPEGDQFGAVSKVCTPAEDGVEGSIWLLAKAYVGVVDSGVHQL 60
           LK D TLKPL IELSLPHP GD+FGAVS+V TP E GV  S+W LAKA+VGV DSG HQL
Sbjct: 458 LKDDGTLKPLVIELSLPHPNGDKFGAVSEVYTPGE-GVYDSLWQLAKAFVGVNDSGNHQL 516

Query: 61  ISHWYE 66
           ISHW +
Sbjct: 517 ISHWMQ 522


>AT1G72520.1 | Symbols:  | lipoxygenase, putative |
           chr1:27308611-27312589 FORWARD
          Length = 926

 Score = 60.5 bits (145), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 6   TLKPLAIELSLPHPEGDQFGAVSKVCTPAEDGVEGSIWLLAKAYVGVVDSGVHQLISHW 64
           TLKP+AIELSLP           +V TP  D     +W LAKA+VG  D+GVHQL++HW
Sbjct: 529 TLKPIAIELSLPSQSSSNQ-KSKRVVTPPVDATSNWMWQLAKAHVGSNDAGVHQLVNHW 586


>AT1G17420.1 | Symbols: LOX3 | LOX3; electron carrier/ iron ion
           binding / lipoxygenase/ metal ion binding /
           oxidoreductase, acting on single donors with
           incorporation of molecular oxygen, incorporation of two
           atoms of oxygen | chr1:5977512-5981384 FORWARD
          Length = 919

 Score = 60.5 bits (145), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%)

Query: 6   TLKPLAIELSLPHPEGDQFGAVSKVCTPAEDGVEGSIWLLAKAYVGVVDSGVHQLISHW 64
           TLKP+AIELSLP P G +  +  +V TP  D     +W LAKA+V   D+GVHQL++HW
Sbjct: 523 TLKPVAIELSLP-PHGPKHRS-KRVLTPPVDATSNWMWQLAKAHVSSNDAGVHQLVNHW 579


>AT1G67560.1 | Symbols:  | lipoxygenase family protein |
           chr1:25319926-25324117 FORWARD
          Length = 917

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 7   LKPLAIELSLPHPEGDQFGAVSKVCTPAEDGVEGSIWLLAKAYVGVVDSGVHQLISHW 64
           L+PLAIELSLP P  +       V T   D     IW LAKA+V   D+GVHQL++HW
Sbjct: 522 LRPLAIELSLP-PTAESENKF--VYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHW 576


>AT3G45140.1 | Symbols: LOX2, ATLOX2 | LOX2 (LIPOXYGENASE 2);
           lipoxygenase | chr3:16525437-16529233 FORWARD
          Length = 896

 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 1   LKADETLKPLAIELSLP----HPEGDQFGAVSKVCTPAEDGVEGSIWLLAKAYVGVVDSG 56
           L  D TL+P+AIEL+ P     P+  Q      V TP  D     +W LAK +    D+G
Sbjct: 494 LSDDSTLRPVAIELTCPPNINKPQWKQ------VFTPGYDATSCWLWNLAKTHAISHDAG 547

Query: 57  VHQLISHW 64
            HQLISHW
Sbjct: 548 YHQLISHW 555