Jatropha Genome Database

JcCD0145641.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0145641.10 + phase: 1 /pseudo/partial/short
         (49 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G27710.1 | Symbols: CYP709B3 | CYP709B3; electron carrier/ he...    59   9e-10
AT2G46960.2 | Symbols: CYP709B1 | CYP709B1; electron carrier/ he...    56   6e-09
AT2G46950.1 | Symbols: CYP709B2 | CYP709B2; electron carrier/ he...    55   1e-08

>AT4G27710.1 | Symbols: CYP709B3 | CYP709B3; electron carrier/
          heme binding / iron ion binding / monooxygenase/ oxygen
          binding | chr4:13828520-13830417 FORWARD
          Length = 518

 Score = 58.5 bits (140), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/42 (61%), Positives = 32/42 (76%)

Query: 1  LYGSLAEMKELKKVARKTVLDTNSNDIIHRVVPHYHKWFSQY 42
          LYG+L+E+K++KK A   VLD NSNDI  RV P YH+W SQY
Sbjct: 53 LYGNLSEIKKMKKEADLCVLDPNSNDIFPRVFPQYHQWMSQY 94


>AT2G46960.2 | Symbols: CYP709B1 | CYP709B1; electron carrier/
          heme binding / iron ion binding / monooxygenase/ oxygen
          binding | chr2:19292295-19294212 REVERSE
          Length = 519

 Score = 55.8 bits (133), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 21/42 (50%), Positives = 33/42 (78%)

Query: 1  LYGSLAEMKELKKVARKTVLDTNSNDIIHRVVPHYHKWFSQY 42
           YG+L+E+K++K+ +  ++LD +SNDI  R++PHY KW SQY
Sbjct: 51 FYGNLSEIKKMKRESHLSILDPSSNDIFPRILPHYQKWMSQY 92


>AT2G46950.1 | Symbols: CYP709B2 | CYP709B2; electron carrier/ heme
           binding / iron ion binding / monooxygenase/ oxygen
           binding | chr2:19289466-19291541 REVERSE
          Length = 572

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/42 (54%), Positives = 32/42 (76%)

Query: 1   LYGSLAEMKELKKVARKTVLDTNSNDIIHRVVPHYHKWFSQY 42
           LYG+L E++++K  A+  VLD NSNDI+ RV+PH  +W SQY
Sbjct: 108 LYGNLREIRKMKNEAKLMVLDPNSNDIVPRVLPHLQQWKSQY 149