Jatropha Genome Database
- JcCD0138510.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCD0138510.10 + phase: 0 /pseudo/partial
(72 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G45650.1 | Symbols: AGL6 | AGL6 (AGAMOUS-LIKE 6); DNA binding... 72 5e-14
AT5G15800.2 | Symbols: SEP1, AGL2 | SEP1 (SEPALLATA1); DNA bindi... 66 5e-12
AT5G15800.1 | Symbols: SEP1, AGL2 | SEP1 (SEPALLATA1); DNA bindi... 66 5e-12
AT1G24260.2 | Symbols: SEP3, AGL9 | SEP3 (SEPALLATA3); DNA bindi... 66 5e-12
AT1G24260.1 | Symbols: SEP3, AGL9 | SEP3 (SEPALLATA3); DNA bindi... 66 5e-12
AT4G11880.1 | Symbols: AGL14 | AGL14 (agamous-like 14); DNA bind... 65 1e-11
AT2G03710.2 | Symbols: SEP4, AGL3 | SEP4 (SEPALLATA 4); DNA bind... 64 1e-11
AT2G03710.1 | Symbols: SEP4, AGL3 | SEP4 (SEPALLATA 4); DNA bind... 64 1e-11
AT3G58780.2 | Symbols: SHP1, AGL1 | SHP1 (SHATTERPROOF 1); DNA b... 64 2e-11
AT3G02310.1 | Symbols: SEP2, AGL4 | SEP2 (SEPALLATA 2); DNA bind... 64 3e-11
AT4G18960.1 | Symbols: AG | AG (AGAMOUS); DNA binding / transcri... 64 3e-11
AT3G61120.1 | Symbols: AGL13 | AGL13 (AGAMOUS-LIKE 13); DNA bind... 63 4e-11
AT4G09960.2 | Symbols: STK, AGL11 | STK (SEEDSTICK); protein bin... 63 5e-11
AT4G09960.3 | Symbols: STK, AGL11 | STK (SEEDSTICK); protein bin... 62 5e-11
AT4G09960.1 | Symbols: STK, AGL11 | STK (SEEDSTICK); protein bin... 62 5e-11
AT3G58780.1 | Symbols: SHP1, AGL1 | SHP1 (SHATTERPROOF 1); DNA b... 62 5e-11
AT2G42830.2 | Symbols: SHP2, AGL5 | SHP2 (SHATTERPROOF 2); prote... 62 5e-11
AT2G42830.1 | Symbols: SHP2, AGL5 | SHP2 (SHATTERPROOF 2); prote... 62 5e-11
AT2G03710.3 | Symbols: SEP4, AGL3 | SEP4 (SEPALLATA 4); DNA bind... 62 7e-11
AT4G22950.1 | Symbols: AGL19, GL19 | AGL19 (AGAMOUS-LIKE 19); tr... 62 1e-10
AT2G45660.1 | Symbols: AGL20, SOC1 | AGL20 (AGAMOUS-LIKE 20); tr... 62 1e-10
AT5G62165.3 | Symbols: AGL42 | AGL42 (AGAMOUS LIKE 42); transcri... 61 1e-10
AT5G62165.2 | Symbols: AGL42 | AGL42 (AGAMOUS LIKE 42); transcri... 61 1e-10
AT5G62165.1 | Symbols: AGL42 | AGL42 (AGAMOUS LIKE 42); transcri... 61 1e-10
AT5G60910.1 | Symbols: AGL8, FUL | AGL8 (agamous-like 8); transc... 59 7e-10
AT3G57390.1 | Symbols: AGL18 | AGL18; transcription factor | chr... 57 2e-09
AT5G13790.1 | Symbols: AGL15 | AGL15 (AGAMOUS-LIKE 15); DNA bind... 57 2e-09
AT2G22540.1 | Symbols: SVP, AGL22 | SVP (SHORT VEGETATIVE PHASE)... 57 3e-09
AT4G37940.1 | Symbols: AGL21 | AGL21; transcription factor | chr... 56 4e-09
AT1G69120.1 | Symbols: AP1, AGL7 | AP1 (APETALA1); DNA binding /... 56 4e-09
AT2G14210.1 | Symbols: ANR1, AGL44 | AGL44 (AGAMOUS-LIKE 44); DN... 55 7e-09
AT1G26310.1 | Symbols: CAL, CAL1, agl10 | CAL (CAULIFLOWER); DNA... 55 8e-09
AT5G51860.1 | Symbols: | MADS-box protein (AGL72) | chr5:210818... 55 1e-08
AT5G51860.2 | Symbols: | MADS-box protein (AGL72) | chr5:210818... 55 1e-08
AT3G57230.2 | Symbols: AGL16 | AGL16 (AGAMOUS-LIKE 16); transcri... 55 1e-08
AT3G57230.1 | Symbols: AGL16 | AGL16 (AGAMOUS-LIKE 16); transcri... 55 1e-08
AT4G24540.1 | Symbols: AGL24 | AGL24 (AGAMOUS-LIKE 24); protein ... 55 1e-08
AT3G30260.1 | Symbols: AGL79 | AGL79 (AGAMOUS-LIKE 79); DNA bind... 55 1e-08
AT1G71692.1 | Symbols: AGL12, XAL1 | AGL12 (AGAMOUS-LIKE 12); tr... 53 4e-08
AT2G22630.1 | Symbols: AGL17 | AGL17 (agamous-like 17); transcri... 52 8e-08
AT2G22540.2 | Symbols: SVP, AGL22 | SVP (SHORT VEGETATIVE PHASE)... 52 1e-07
AT5G51870.1 | Symbols: AGL71 | AGL71 (AGAMOUS-LIKE 71); transcri... 51 1e-07
AT5G51870.2 | Symbols: AGL71 | AGL71 (AGAMOUS-LIKE 71); transcri... 51 1e-07
AT5G23260.3 | Symbols: TT16, ABS | TT16 (TRANSPARENT TESTA16); t... 48 1e-06
AT5G23260.2 | Symbols: TT16, ABS | TT16 (TRANSPARENT TESTA16); t... 48 1e-06
AT5G23260.1 | Symbols: TT16, ABS, AGL32 | TT16 (TRANSPARENT TEST... 48 1e-06
AT3G54340.1 | Symbols: AP3, ATAP3 | AP3 (APETALA 3); DNA binding... 48 1e-06
AT1G01530.1 | Symbols: AGL28 | AGL28 (AGAMOUS-LIKE 28); DNA bind... 47 2e-06
AT5G20240.1 | Symbols: PI | PI (PISTILLATA); DNA binding / trans... 47 2e-06
AT5G10140.1 | Symbols: FLC, FLF, AGL25 | FLC (FLOWERING LOCUS C)... 47 3e-06
AT5G10140.3 | Symbols: | FLC (FLOWERING LOCUS C); specific tran... 46 4e-06
AT5G10140.2 | Symbols: FLC, FLF, AGL25 | FLC (FLOWERING LOCUS C)... 46 5e-06
>AT2G45650.1 | Symbols: AGL6 | AGL6 (AGAMOUS-LIKE 6); DNA binding
/ transcription factor | chr2:18804453-18806291 FORWARD
Length = 252
Score = 72.4 bits (176), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/35 (97%), Positives = 34/35 (97%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS G
Sbjct: 27 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVG 61
>AT5G15800.2 | Symbols: SEP1, AGL2 | SEP1 (SEPALLATA1); DNA
binding / transcription factor | chr5:5151594-5153767
REVERSE
Length = 262
Score = 65.9 bits (159), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/34 (91%), Positives = 33/34 (97%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKAYELSVLCDAEVALIIFS+RGKLYEF S+
Sbjct: 27 GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
>AT5G15800.1 | Symbols: SEP1, AGL2 | SEP1 (SEPALLATA1); DNA
binding / transcription factor | chr5:5151594-5153767
REVERSE
Length = 251
Score = 65.9 bits (159), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/34 (91%), Positives = 33/34 (97%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKAYELSVLCDAEVALIIFS+RGKLYEF S+
Sbjct: 27 GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
>AT1G24260.2 | Symbols: SEP3, AGL9 | SEP3 (SEPALLATA3); DNA
binding / protein binding / transcription factor |
chr1:8593790-8595862 REVERSE
Length = 251
Score = 65.9 bits (159), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/34 (91%), Positives = 33/34 (97%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKAYELSVLCDAEVALIIFS+RGKLYEF S+
Sbjct: 27 GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
>AT1G24260.1 | Symbols: SEP3, AGL9 | SEP3 (SEPALLATA3); DNA
binding / protein binding / transcription factor |
chr1:8593790-8595862 REVERSE
Length = 250
Score = 65.9 bits (159), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/34 (91%), Positives = 33/34 (97%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKAYELSVLCDAEVALIIFS+RGKLYEF S+
Sbjct: 27 GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
>AT4G11880.1 | Symbols: AGL14 | AGL14 (agamous-like 14); DNA
binding / transcription factor | chr4:7143512-7147108
FORWARD
Length = 221
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/34 (88%), Positives = 32/34 (94%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKA+ELSVLCDAEVALIIFS RGKLYEF S+
Sbjct: 27 GLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60
>AT2G03710.2 | Symbols: SEP4, AGL3 | SEP4 (SEPALLATA 4); DNA
binding / transcription factor | chr2:1129622-1131628
FORWARD
Length = 257
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/34 (85%), Positives = 33/34 (97%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKAYELSVLCDAE+AL+IFS+RGKLYEF S+
Sbjct: 27 GLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60
>AT2G03710.1 | Symbols: SEP4, AGL3 | SEP4 (SEPALLATA 4); DNA
binding / transcription factor | chr2:1129622-1131628
FORWARD
Length = 258
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/34 (85%), Positives = 33/34 (97%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKAYELSVLCDAE+AL+IFS+RGKLYEF S+
Sbjct: 27 GLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60
>AT3G58780.2 | Symbols: SHP1, AGL1 | SHP1 (SHATTERPROOF 1); DNA
binding / protein binding / transcription factor |
chr3:21739150-21741766 FORWARD
Length = 241
Score = 63.5 bits (153), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGY 36
GLLKKAYELSVLCDAEVAL+IFS+RG+LYE+ + Y
Sbjct: 42 GLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNRY 77
>AT3G02310.1 | Symbols: SEP2, AGL4 | SEP2 (SEPALLATA 2); DNA
binding / protein binding / transcription factor |
chr3:464554-466687 REVERSE
Length = 250
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/33 (87%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKAYELSVLCDAEV+LI+FS+RGKLYEF S
Sbjct: 27 GLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCS 59
>AT4G18960.1 | Symbols: AG | AG (AGAMOUS); DNA binding /
transcription factor | chr4:10383917-10388272 FORWARD
Length = 252
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 43 GLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 75
>AT3G61120.1 | Symbols: AGL13 | AGL13 (AGAMOUS-LIKE 13); DNA
binding / transcription factor | chr3:22618414-22620466
REVERSE
Length = 244
Score = 62.8 bits (151), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/35 (82%), Positives = 32/35 (91%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GLLKKAYELSVLCDAEV+LIIFS+ GKLYEF + G
Sbjct: 27 GLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVG 61
>AT4G09960.2 | Symbols: STK, AGL11 | STK (SEEDSTICK); protein
binding / transcription factor | chr4:6236713-6239409
REVERSE
Length = 216
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 32/35 (91%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +
Sbjct: 27 GLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNN 61
>AT4G09960.3 | Symbols: STK, AGL11 | STK (SEEDSTICK); protein
binding / transcription factor | chr4:6236713-6240494
REVERSE
Length = 256
Score = 62.4 bits (150), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +
Sbjct: 53 GLLKKAYELSVLCDAEVALIVFSTRGRLYEYAN 85
>AT4G09960.1 | Symbols: STK, AGL11 | STK (SEEDSTICK); protein
binding / transcription factor | chr4:6236713-6239409
REVERSE
Length = 230
Score = 62.4 bits (150), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +
Sbjct: 27 GLLKKAYELSVLCDAEVALIVFSTRGRLYEYAN 59
>AT3G58780.1 | Symbols: SHP1, AGL1 | SHP1 (SHATTERPROOF 1); DNA
binding / protein binding / transcription factor |
chr3:21739150-21741766 FORWARD
Length = 248
Score = 62.4 bits (150), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKAYELSVLCDAEVAL+IFS+RG+LYE+ +
Sbjct: 42 GLLKKAYELSVLCDAEVALVIFSTRGRLYEYAN 74
>AT2G42830.2 | Symbols: SHP2, AGL5 | SHP2 (SHATTERPROOF 2);
protein binding / transcription factor |
chr2:17820602-17823806 FORWARD
Length = 248
Score = 62.4 bits (150), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKAYELSVLCDAEVAL+IFS+RG+LYE+ +
Sbjct: 42 GLLKKAYELSVLCDAEVALVIFSTRGRLYEYAN 74
>AT2G42830.1 | Symbols: SHP2, AGL5 | SHP2 (SHATTERPROOF 2);
protein binding / transcription factor |
chr2:17820602-17823806 FORWARD
Length = 246
Score = 62.4 bits (150), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKAYELSVLCDAEVAL+IFS+RG+LYE+ +
Sbjct: 42 GLLKKAYELSVLCDAEVALVIFSTRGRLYEYAN 74
>AT2G03710.3 | Symbols: SEP4, AGL3 | SEP4 (SEPALLATA 4); DNA
binding / transcription factor | chr2:1129622-1131242
FORWARD
Length = 187
Score = 62.0 bits (149), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 33/34 (97%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKAYELSVLCDAE+AL+IFS+RGKLYEF S+
Sbjct: 27 GLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60
>AT4G22950.1 | Symbols: AGL19, GL19 | AGL19 (AGAMOUS-LIKE 19);
transcription factor | chr4:12023946-12027421 REVERSE
Length = 219
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/34 (82%), Positives = 31/34 (91%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKA+ELSVLCDAEVAL+IFS R KLYEF S+
Sbjct: 27 GLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60
>AT2G45660.1 | Symbols: AGL20, SOC1 | AGL20 (AGAMOUS-LIKE 20);
transcription factor | chr2:18807799-18810193 REVERSE
Length = 214
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 32/35 (91%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GLLKKA+ELSVLCDAEV+LIIFS +GKLYEF S+
Sbjct: 27 GLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSN 61
>AT5G62165.3 | Symbols: AGL42 | AGL42 (AGAMOUS LIKE 42);
transcription factor | chr5:24965075-24968437 FORWARD
Length = 210
Score = 60.8 bits (146), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 32/35 (91%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GLLKKAYELSVLCDA+++LIIFS RG+LYEF S+
Sbjct: 27 GLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSSD 61
>AT5G62165.2 | Symbols: AGL42 | AGL42 (AGAMOUS LIKE 42);
transcription factor | chr5:24965075-24968437 FORWARD
Length = 210
Score = 60.8 bits (146), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 32/35 (91%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GLLKKAYELSVLCDA+++LIIFS RG+LYEF S+
Sbjct: 27 GLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSSD 61
>AT5G62165.1 | Symbols: AGL42 | AGL42 (AGAMOUS LIKE 42);
transcription factor | chr5:24965075-24968437 FORWARD
Length = 210
Score = 60.8 bits (146), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 32/35 (91%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GLLKKAYELSVLCDA+++LIIFS RG+LYEF S+
Sbjct: 27 GLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSSD 61
>AT5G60910.1 | Symbols: AGL8, FUL | AGL8 (agamous-like 8);
transcription factor | chr5:24502736-24506013 REVERSE
Length = 242
Score = 58.9 bits (141), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 32/33 (96%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKA+E+SVLCDAEVALI+FSS+GKL+E+ +
Sbjct: 27 GLLKKAHEISVLCDAEVALIVFSSKGKLFEYST 59
>AT3G57390.1 | Symbols: AGL18 | AGL18; transcription factor |
chr3:21233910-21235735 FORWARD
Length = 256
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GL+KKA ELS+LCDAEVALIIFSS GK+Y+F S
Sbjct: 27 GLIKKAKELSILCDAEVALIIFSSTGKIYDFSS 59
>AT5G13790.1 | Symbols: AGL15 | AGL15 (AGAMOUS-LIKE 15); DNA
binding / transcription factor | chr5:4449128-4450802
REVERSE
Length = 268
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GLLKKA ELSVLCDAEVA+I+FS GKL+E+ S G
Sbjct: 27 GLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTG 61
>AT2G22540.1 | Symbols: SVP, AGL22 | SVP (SHORT VEGETATIVE PHASE);
transcription factor/ translation repressor, nucleic
acid binding | chr2:9580417-9583603 FORWARD
Length = 240
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/34 (79%), Positives = 30/34 (88%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GL KKA ELSVLCDA+VALIIFSS GKL+EF S+
Sbjct: 27 GLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60
>AT4G37940.1 | Symbols: AGL21 | AGL21; transcription factor |
chr4:17835695-17838621 REVERSE
Length = 228
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GL+KKA EL++LCDAEV LIIFSS GKLY+F S+
Sbjct: 27 GLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60
>AT1G69120.1 | Symbols: AP1, AGL7 | AP1 (APETALA1); DNA binding /
protein binding / protein heterodimerization/
transcription activator/ transcription factor |
chr1:25982576-25986102 REVERSE
Length = 256
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/33 (69%), Positives = 31/33 (93%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKA+E+SVLCDAEVAL++FS +GKL+E+ +
Sbjct: 27 GLLKKAHEISVLCDAEVALVVFSHKGKLFEYST 59
>AT2G14210.1 | Symbols: ANR1, AGL44 | AGL44 (AGAMOUS-LIKE 44); DNA
binding / transcription factor | chr2:6018841-6023585
FORWARD
Length = 234
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKA ELS+LCDAEV +IIFSS GKLY++ S
Sbjct: 27 GLLKKAKELSILCDAEVGVIIFSSTGKLYDYAS 59
>AT1G26310.1 | Symbols: CAL, CAL1, agl10 | CAL (CAULIFLOWER); DNA
binding / transcription factor | chr1:9100330-9103510
REVERSE
Length = 255
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/33 (72%), Positives = 30/33 (90%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GLLKKA E+SVLCDAEV+LI+FS +GKL+E+ S
Sbjct: 27 GLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSS 59
>AT5G51860.1 | Symbols: | MADS-box protein (AGL72) |
chr5:21081844-21084126 REVERSE
Length = 211
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GL KKA+ELSVLCDA+VA +IFS +G+LYEF S+
Sbjct: 27 GLFKKAHELSVLCDAQVAAMIFSQKGRLYEFASSD 61
>AT5G51860.2 | Symbols: | MADS-box protein (AGL72) |
chr5:21081844-21084126 REVERSE
Length = 202
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GL KKA+ELSVLCDA+VA +IFS +G+LYEF S+
Sbjct: 27 GLFKKAHELSVLCDAQVAAMIFSQKGRLYEFASSD 61
>AT3G57230.2 | Symbols: AGL16 | AGL16 (AGAMOUS-LIKE 16);
transcription factor | chr3:21177710-21180671 FORWARD
Length = 239
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 30/34 (88%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKA EL++LCDAEV +IIFSS G+LY+F S+
Sbjct: 27 GLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60
>AT3G57230.1 | Symbols: AGL16 | AGL16 (AGAMOUS-LIKE 16);
transcription factor | chr3:21177710-21180671 FORWARD
Length = 240
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 30/34 (88%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GLLKKA EL++LCDAEV +IIFSS G+LY+F S+
Sbjct: 27 GLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60
>AT4G24540.1 | Symbols: AGL24 | AGL24 (AGAMOUS-LIKE 24); protein
binding / protein heterodimerization/ protein
homodimerization/ sequence-specific DNA binding /
transcription factor | chr4:12671160-12673645 REVERSE
Length = 220
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
G+ KKA ELSVLCDA+VALIIFS+ GKL+EF S+
Sbjct: 27 GIFKKADELSVLCDADVALIIFSATGKLFEFSSS 60
>AT3G30260.1 | Symbols: AGL79 | AGL79 (AGAMOUS-LIKE 79); DNA
binding / transcription factor | chr3:11909119-11912880
FORWARD
Length = 249
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/35 (74%), Positives = 32/35 (91%), Gaps = 1/35 (2%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GL+KKA E+SVLCDAEVALI+FS +GKL+E+ SAG
Sbjct: 27 GLVKKAQEISVLCDAEVALIVFSPKGKLFEY-SAG 60
>AT1G71692.1 | Symbols: AGL12, XAL1 | AGL12 (AGAMOUS-LIKE 12);
transcription factor | chr1:26952903-26954939 REVERSE
Length = 211
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 29/35 (82%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 35
GLLKKA ELSVLCDAE+ ++IFS +GKL+E + G
Sbjct: 27 GLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKG 61
>AT2G22630.1 | Symbols: AGL17 | AGL17 (agamous-like 17);
transcription factor | chr2:9618372-9621641 FORWARD
Length = 227
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/34 (67%), Positives = 29/34 (85%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GL+KKA EL++LCDAEV LIIFS+ KLY+F S+
Sbjct: 27 GLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS 60
>AT2G22540.2 | Symbols: SVP, AGL22 | SVP (SHORT VEGETATIVE PHASE);
transcription factor/ translation repressor, nucleic
acid binding | chr2:9580417-9583603 FORWARD
Length = 235
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYE 30
GL KKA ELSVLCDA+VALIIFSS GKL++
Sbjct: 27 GLFKKAEELSVLCDADVALIIFSSTGKLFD 56
>AT5G51870.1 | Symbols: AGL71 | AGL71 (AGAMOUS-LIKE 71);
transcription factor | chr5:21085635-21087923 REVERSE
Length = 207
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 29/34 (85%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GL KKA+ELSVLCDA+VA I+FS G+L+E+ S+
Sbjct: 27 GLFKKAHELSVLCDAQVAAIVFSQSGRLHEYSSS 60
>AT5G51870.2 | Symbols: AGL71 | AGL71 (AGAMOUS-LIKE 71);
transcription factor | chr5:21086162-21087923 REVERSE
Length = 172
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 29/34 (85%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 34
GL KKA+ELSVLCDA+VA I+FS G+L+E+ S+
Sbjct: 27 GLFKKAHELSVLCDAQVAAIVFSQSGRLHEYSSS 60
>AT5G23260.3 | Symbols: TT16, ABS | TT16 (TRANSPARENT TESTA16);
transcription factor | chr5:7836442-7838340 FORWARD
Length = 238
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GL+KK ELS+LCDA + LI+FS+ GKL EF S
Sbjct: 27 GLIKKTRELSILCDAHIGLIVFSATGKLSEFCS 59
>AT5G23260.2 | Symbols: TT16, ABS | TT16 (TRANSPARENT TESTA16);
transcription factor | chr5:7836442-7838340 FORWARD
Length = 252
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GL+KK ELS+LCDA + LI+FS+ GKL EF S
Sbjct: 27 GLIKKTRELSILCDAHIGLIVFSATGKLSEFCS 59
>AT5G23260.1 | Symbols: TT16, ABS, AGL32 | TT16 (TRANSPARENT
TESTA16); transcription factor | chr5:7836442-7838340
FORWARD
Length = 247
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GL+KK ELS+LCDA + LI+FS+ GKL EF S
Sbjct: 27 GLIKKTRELSILCDAHIGLIVFSATGKLSEFCS 59
>AT3G54340.1 | Symbols: AP3, ATAP3 | AP3 (APETALA 3); DNA binding
/ transcription factor | chr3:20119428-20121087 REVERSE
Length = 232
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 28/33 (84%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GL KKA+EL+VLCDA V++I+FSS KL+E+ S
Sbjct: 27 GLFKKAHELTVLCDARVSIIMFSSSNKLHEYIS 59
>AT1G01530.1 | Symbols: AGL28 | AGL28 (AGAMOUS-LIKE 28); DNA
binding / transcription factor | chr1:192640-193662
REVERSE
Length = 247
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/32 (62%), Positives = 23/32 (71%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 32
GL KK EL LCDAE+A+I+FS GK Y FG
Sbjct: 32 GLFKKGSELCTLCDAEIAIIVFSPSGKAYSFG 63
>AT5G20240.1 | Symbols: PI | PI (PISTILLATA); DNA binding /
transcription factor | chr5:6829203-6831208 FORWARD
Length = 208
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 28/31 (90%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEF 31
GL+KKA E++VLCDA+VALIIF+S GK+ ++
Sbjct: 27 GLVKKAKEITVLCDAKVALIIFASNGKMIDY 57
>AT5G10140.1 | Symbols: FLC, FLF, AGL25 | FLC (FLOWERING LOCUS C);
specific transcriptional repressor/ transcription
factor | chr5:3173724-3179339 REVERSE
Length = 196
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GL++KA +LSVLCDA VAL++ S+ GKLY F S
Sbjct: 27 GLIEKARQLSVLCDASVALLVVSASGKLYSFSS 59
>AT5G10140.3 | Symbols: | FLC (FLOWERING LOCUS C); specific
transcriptional repressor/ transcription factor |
chr5:3174036-3179339 REVERSE
Length = 186
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GL++KA +LSVLCDA VAL++ S+ GKLY F S
Sbjct: 27 GLIEKARQLSVLCDASVALLVVSASGKLYSFSS 59
>AT5G10140.2 | Symbols: FLC, FLF, AGL25 | FLC (FLOWERING LOCUS C);
specific transcriptional repressor/ transcription
factor | chr5:3173877-3179339 REVERSE
Length = 167
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 1 GLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 33
GL++KA +LSVLCDA VAL++ S+ GKLY F S
Sbjct: 27 GLIEKARQLSVLCDASVALLVVSASGKLYSFSS 59