Jatropha Genome Database

JcCD0108263.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0108263.10 - phase: 2 /pseudo/partial
         (108 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33650.1 | Symbols: ADL2, DRP3A | DRP3A (DYNAMIN-RELATED PROT...    89   5e-19
AT2G14120.1 | Symbols: DRP3B | dynamin-like protein 2b (ADL2b) |...    84   1e-17
AT2G14120.3 | Symbols: DRP3B | dynamin-like protein 2b (ADL2b) |...    84   1e-17
AT2G14120.2 | Symbols: DRP3B | dynamin-like protein 2b (ADL2b) |...    84   1e-17

>AT4G33650.1 | Symbols: ADL2, DRP3A | DRP3A (DYNAMIN-RELATED PROTEIN
           3A); GTP binding / GTPase/ phosphoinositide binding |
           chr4:16161073-16166587 FORWARD
          Length = 808

 Score = 89.4 bits (220), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 52/73 (71%)

Query: 3   ILLQMDYINTSHPNFIGGSKAVEIALQQVKSSRAVPLSLRQKDGAEPDKAPASERTLKSR 62
           I ++MDYINTSHPNFIGG+KAVE A+ QVKSSR      R KD  EPD+  +S   +KSR
Sbjct: 515 IDMEMDYINTSHPNFIGGTKAVEAAMHQVKSSRIPHPVARPKDTVEPDRTSSSTSQVKSR 574

Query: 63  AILARQVNGVVAD 75
           + L RQ NG+V D
Sbjct: 575 SFLGRQANGIVTD 587


>AT2G14120.1 | Symbols: DRP3B | dynamin-like protein 2b (ADL2b) |
           chr2:5954253-5960015 REVERSE
          Length = 780

 Score = 84.3 bits (207), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 55/87 (63%)

Query: 3   ILLQMDYINTSHPNFIGGSKAVEIALQQVKSSRAVPLSLRQKDGAEPDKAPASERTLKSR 62
           I ++MDYINTSHPNFIGG+KAVE A+Q VKSSR      R +D  EP++  +S   +K+R
Sbjct: 500 IEMEMDYINTSHPNFIGGTKAVEQAMQTVKSSRIPHPVARPRDTVEPERTASSGSQIKTR 559

Query: 63  AILARQVNGVVADXXXXXXXXXESHSP 89
           + L RQ NG++ D         E  +P
Sbjct: 560 SFLGRQANGIITDQAVPTAADAERPAP 586


>AT2G14120.3 | Symbols: DRP3B | dynamin-like protein 2b (ADL2b) |
           chr2:5954253-5960015 REVERSE
          Length = 809

 Score = 84.3 bits (207), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 55/87 (63%)

Query: 3   ILLQMDYINTSHPNFIGGSKAVEIALQQVKSSRAVPLSLRQKDGAEPDKAPASERTLKSR 62
           I ++MDYINTSHPNFIGG+KAVE A+Q VKSSR      R +D  EP++  +S   +K+R
Sbjct: 529 IEMEMDYINTSHPNFIGGTKAVEQAMQTVKSSRIPHPVARPRDTVEPERTASSGSQIKTR 588

Query: 63  AILARQVNGVVADXXXXXXXXXESHSP 89
           + L RQ NG++ D         E  +P
Sbjct: 589 SFLGRQANGIITDQAVPTAADAERPAP 615


>AT2G14120.2 | Symbols: DRP3B | dynamin-like protein 2b (ADL2b) |
           chr2:5954253-5960015 REVERSE
          Length = 780

 Score = 84.3 bits (207), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 55/87 (63%)

Query: 3   ILLQMDYINTSHPNFIGGSKAVEIALQQVKSSRAVPLSLRQKDGAEPDKAPASERTLKSR 62
           I ++MDYINTSHPNFIGG+KAVE A+Q VKSSR      R +D  EP++  +S   +K+R
Sbjct: 500 IEMEMDYINTSHPNFIGGTKAVEQAMQTVKSSRIPHPVARPRDTVEPERTASSGSQIKTR 559

Query: 63  AILARQVNGVVADXXXXXXXXXESHSP 89
           + L RQ NG++ D         E  +P
Sbjct: 560 SFLGRQANGIITDQAFPTAADAERPAP 586