Jatropha Genome Database

JcCD0081914.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0081914.10 + phase: 0 /partial
         (69 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G04870.2 | Symbols: ZDS, PDE181 | ZDS (ZETA-CAROTENE DESATURA...    70   3e-13
AT3G04870.1 | Symbols: ZDS, PDE181 | ZDS (ZETA-CAROTENE DESATURA...    70   3e-13

>AT3G04870.2 | Symbols: ZDS, PDE181 | ZDS (ZETA-CAROTENE
           DESATURASE); carotene 7,8-desaturase |
           chr3:1342842-1346189 FORWARD
          Length = 558

 Score = 70.1 bits (170), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/35 (82%), Positives = 33/35 (94%)

Query: 28  KVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFLA 62
           +VDIY+SR+FIGGKVGSFVD+RGNHIEMGLHVF  
Sbjct: 81  EVDIYDSRTFIGGKVGSFVDRRGNHIEMGLHVFFG 115


>AT3G04870.1 | Symbols: ZDS, PDE181 | ZDS (ZETA-CAROTENE
           DESATURASE); carotene 7,8-desaturase |
           chr3:1342842-1346189 FORWARD
          Length = 558

 Score = 70.1 bits (170), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/35 (82%), Positives = 33/35 (94%)

Query: 28  KVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFLA 62
           +VDIY+SR+FIGGKVGSFVD+RGNHIEMGLHVF  
Sbjct: 81  EVDIYDSRTFIGGKVGSFVDRRGNHIEMGLHVFFG 115