Jatropha Genome Database

JcCD0062613.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0062613.10 - phase: 0 /partial
         (135 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G35790.1 | Symbols: ATPLDDELTA, PLDDELTA | ATPLDDELTA; phosph...   196   3e-51
AT4G35790.2 | Symbols: ATPLDDELTA, PLDDELTA | ATPLDDELTA; phosph...   194   1e-50
AT4G35790.3 | Symbols: ATPLDDELTA, PLDDELTA | ATPLDDELTA; phosph...   194   1e-50
AT2G42010.1 | Symbols: PLDBETA1, PLDBETA | PLDBETA1 (PHOSPHOLIPA...   134   1e-32
AT4G11840.1 | Symbols: PLDGAMMA3 | PLDGAMMA3; phospholipase D | ...   133   3e-32
AT4G11850.1 | Symbols: PLDGAMMA1, MEE54 | PLDGAMMA1; phospholipa...   132   6e-32
AT4G11830.1 | Symbols: PLDGAMMA2 | PLDGAMMA2; phospholipase D | ...   131   1e-31
AT4G11830.2 | Symbols: PLDGAMMA2 | PLDGAMMA2; phospholipase D | ...   131   1e-31
AT4G00240.1 | Symbols: PLDBETA2 | PLDBETA2; phospholipase D | ch...   131   2e-31
AT3G15730.1 | Symbols: PLDALPHA1, PLD | PLDALPHA1 (PHOSPHOLIPASE...   126   4e-30
AT1G52570.1 | Symbols: PLDALPHA2 | PLDALPHA2 (phosphlipase d alp...   122   6e-29
AT5G25370.1 | Symbols: PLDALPHA3 | PLDALPHA3 (PHOSPHLIPASE D ALP...   113   3e-26
AT1G55180.1 | Symbols: PLDEPSILON, PLDALPHA4 | PLDEPSILON (PHOSP...    88   1e-18

>AT4G35790.1 | Symbols: ATPLDDELTA, PLDDELTA | ATPLDDELTA;
           phospholipase D | chr4:16955774-16959875 REVERSE
          Length = 868

 Score =  196 bits (498), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 93/125 (74%), Positives = 106/125 (84%), Gaps = 2/125 (1%)

Query: 1   GDVFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYK 60
           G V++H  CWEDIC+AI EAHH++YIVGWSI+HK+KLVRE    +P   ++ LG+LLKYK
Sbjct: 232 GKVYEHGKCWEDICYAISEAHHMIYIVGWSIFHKIKLVRETK--VPRDKDMTLGELLKYK 289

Query: 61  SQEGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSI 120
           SQEGVRVL+LVWDDKTSH KF I T GVM THDEETRKFFKHSSV CVLSPRYASSKL +
Sbjct: 290 SQEGVRVLLLVWDDKTSHDKFGIKTPGVMGTHDEETRKFFKHSSVICVLSPRYASSKLGL 349

Query: 121 FKQQA 125
           FKQQA
Sbjct: 350 FKQQA 354


>AT4G35790.2 | Symbols: ATPLDDELTA, PLDDELTA | ATPLDDELTA;
           phospholipase D | chr4:16955774-16959875 REVERSE
          Length = 857

 Score =  194 bits (493), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 92/124 (74%), Positives = 105/124 (84%), Gaps = 2/124 (1%)

Query: 1   GDVFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYK 60
           G V++H  CWEDIC+AI EAHH++YIVGWSI+HK+KLVRE    +P   ++ LG+LLKYK
Sbjct: 232 GKVYEHGKCWEDICYAISEAHHMIYIVGWSIFHKIKLVRETK--VPRDKDMTLGELLKYK 289

Query: 61  SQEGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSI 120
           SQEGVRVL+LVWDDKTSH KF I T GVM THDEETRKFFKHSSV CVLSPRYASSKL +
Sbjct: 290 SQEGVRVLLLVWDDKTSHDKFGIKTPGVMGTHDEETRKFFKHSSVICVLSPRYASSKLGL 349

Query: 121 FKQQ 124
           FKQQ
Sbjct: 350 FKQQ 353


>AT4G35790.3 | Symbols: ATPLDDELTA, PLDDELTA | ATPLDDELTA;
           phospholipase D | chr4:16956681-16959875 REVERSE
          Length = 693

 Score =  194 bits (493), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 92/124 (74%), Positives = 105/124 (84%), Gaps = 2/124 (1%)

Query: 1   GDVFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYK 60
           G V++H  CWEDIC+AI EAHH++YIVGWSI+HK+KLVRE    +P   ++ LG+LLKYK
Sbjct: 232 GKVYEHGKCWEDICYAISEAHHMIYIVGWSIFHKIKLVRETK--VPRDKDMTLGELLKYK 289

Query: 61  SQEGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSI 120
           SQEGVRVL+LVWDDKTSH KF I T GVM THDEETRKFFKHSSV CVLSPRYASSKL +
Sbjct: 290 SQEGVRVLLLVWDDKTSHDKFGIKTPGVMGTHDEETRKFFKHSSVICVLSPRYASSKLGL 349

Query: 121 FKQQ 124
           FKQQ
Sbjct: 350 FKQQ 353


>AT2G42010.1 | Symbols: PLDBETA1, PLDBETA | PLDBETA1 (PHOSPHOLIPASE
           D BETA 1); phospholipase D | chr2:17533018-17537990
           REVERSE
          Length = 1083

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/124 (53%), Positives = 83/124 (66%), Gaps = 3/124 (2%)

Query: 1   GDVFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYK 60
           G  ++H  CW D+  AI +A  L+YI GWS++HKVKL+R+   P        LG+LL+ K
Sbjct: 471 GMSYEHGKCWHDMFDAIRQARRLIYITGWSVWHKVKLIRDKLGP---ASECTLGELLRSK 527

Query: 61  SQEGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSI 120
           SQEGVRVL+L+WDD TS S     T GVM THDEETR+FFKHSSV  +L PR A  + S 
Sbjct: 528 SQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRNAGKRHSW 587

Query: 121 FKQQ 124
            KQ+
Sbjct: 588 VKQR 591


>AT4G11840.1 | Symbols: PLDGAMMA3 | PLDGAMMA3; phospholipase D |
           chr4:7122152-7125882 REVERSE
          Length = 866

 Score =  133 bits (335), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/123 (52%), Positives = 79/123 (64%), Gaps = 4/123 (3%)

Query: 1   GDVFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYK 60
           G  ++H  CWED+  AI  A  L+YI GWS++H V+LVR    P        LG+LLK K
Sbjct: 248 GIQYRHGKCWEDMADAIRRARRLIYITGWSVFHPVRLVRRNNDPTQG----TLGELLKVK 303

Query: 61  SQEGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSI 120
           SQEGVRVL+LVWDD TS S    +T G+M T DEETR+FFKHSSV  +L PRY     S 
Sbjct: 304 SQEGVRVLVLVWDDPTSRSLLGFSTKGLMNTSDEETRRFFKHSSVQVLLCPRYGGKGHSF 363

Query: 121 FKQ 123
            K+
Sbjct: 364 IKK 366


>AT4G11850.1 | Symbols: PLDGAMMA1, MEE54 | PLDGAMMA1; phospholipase
           D | chr4:7129352-7132937 REVERSE
          Length = 858

 Score =  132 bits (332), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 65/123 (52%), Positives = 78/123 (63%), Gaps = 4/123 (3%)

Query: 1   GDVFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYK 60
           G  ++H  CWED+  AI +A  L+YI GWS++H V+LVR    P        LG+LLK K
Sbjct: 241 GIQYRHGKCWEDMADAIRQARRLIYITGWSVFHPVRLVRRTNDPTEG----TLGELLKVK 296

Query: 61  SQEGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSI 120
           SQEGVRVL+LVWDD TS S     T GVM T DEETR+FFKHSSV  +L PR      S 
Sbjct: 297 SQEGVRVLVLVWDDPTSRSLLGFKTQGVMNTSDEETRRFFKHSSVQVLLCPRSGGKGHSF 356

Query: 121 FKQ 123
            K+
Sbjct: 357 IKK 359


>AT4G11830.1 | Symbols: PLDGAMMA2 | PLDGAMMA2; phospholipase D |
           chr4:7115985-7119683 REVERSE
          Length = 824

 Score =  131 bits (330), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 65/123 (52%), Positives = 79/123 (64%), Gaps = 4/123 (3%)

Query: 1   GDVFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYK 60
           G  ++H  CWED+  AI  A  L+YI GWS++H V+LVR    P        LG+LLK K
Sbjct: 207 GIQYRHGKCWEDMADAIRRARRLIYITGWSVFHPVRLVRRNNDPTEG----TLGELLKVK 262

Query: 61  SQEGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSI 120
           SQEGVRVL+LVWDD TS S    +T G+M T DEETR+FFKHSSV  +L PRY     S 
Sbjct: 263 SQEGVRVLVLVWDDPTSMSFPGFSTKGLMNTSDEETRRFFKHSSVQVLLCPRYGGKGHSF 322

Query: 121 FKQ 123
            K+
Sbjct: 323 IKK 325


>AT4G11830.2 | Symbols: PLDGAMMA2 | PLDGAMMA2; phospholipase D |
           chr4:7115985-7119683 REVERSE
          Length = 856

 Score =  131 bits (329), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 65/123 (52%), Positives = 79/123 (64%), Gaps = 4/123 (3%)

Query: 1   GDVFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYK 60
           G  ++H  CWED+  AI  A  L+YI GWS++H V+LVR    P        LG+LLK K
Sbjct: 239 GIQYRHGKCWEDMADAIRRARRLIYITGWSVFHPVRLVRRNNDPTEG----TLGELLKVK 294

Query: 61  SQEGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSI 120
           SQEGVRVL+LVWDD TS S    +T G+M T DEETR+FFKHSSV  +L PRY     S 
Sbjct: 295 SQEGVRVLVLVWDDPTSMSFPGFSTKGLMNTSDEETRRFFKHSSVQVLLCPRYGGKGHSF 354

Query: 121 FKQ 123
            K+
Sbjct: 355 IKK 357


>AT4G00240.1 | Symbols: PLDBETA2 | PLDBETA2; phospholipase D |
           chr4:106380-110718 REVERSE
          Length = 927

 Score =  131 bits (329), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/124 (52%), Positives = 82/124 (66%), Gaps = 3/124 (2%)

Query: 1   GDVFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYK 60
           G  ++H  CW D+ HAI +A  L+YI GWS++H V+LVR+   P        LG+LL+ K
Sbjct: 315 GMCYEHGKCWHDMFHAICQARRLIYITGWSVWHNVRLVRDKEDP---SSECRLGELLRSK 371

Query: 61  SQEGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSI 120
           SQEGVRVL+LVWDD TS +     T GVM THDEETR+FFK SSV  +L PR A  + S 
Sbjct: 372 SQEGVRVLLLVWDDPTSQNILGYMTDGVMGTHDEETRRFFKDSSVQVLLCPRNAGKRHSW 431

Query: 121 FKQQ 124
            KQ+
Sbjct: 432 VKQR 435


>AT3G15730.1 | Symbols: PLDALPHA1, PLD | PLDALPHA1 (PHOSPHOLIPASE D
           ALPHA 1); phospholipase D | chr3:5330835-5333474 FORWARD
          Length = 810

 Score =  126 bits (316), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 61/122 (50%), Positives = 81/122 (66%), Gaps = 3/122 (2%)

Query: 1   GDVFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYK 60
           G  ++   CWEDI  AI  A HL+YI GWS+Y ++ LVR+  RP P GG++ +G+LLK K
Sbjct: 203 GKNYEPQRCWEDIFDAISNAKHLIYITGWSVYAEIALVRDSRRPKP-GGDVTIGELLKKK 261

Query: 61  SQEGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSI 120
           + EGVRVL+LVWDD+TS     +   G+M THDEET  FF+ S V+C+L PR      SI
Sbjct: 262 ASEGVRVLLLVWDDRTSVD--VLKKDGLMATHDEETENFFRGSDVHCILCPRNPDDGGSI 319

Query: 121 FK 122
            +
Sbjct: 320 VQ 321


>AT1G52570.1 | Symbols: PLDALPHA2 | PLDALPHA2 (phosphlipase d alpha
           2); phospholipase D | chr1:19583940-19586551 REVERSE
          Length = 810

 Score =  122 bits (306), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 58/123 (47%), Positives = 80/123 (65%), Gaps = 3/123 (2%)

Query: 1   GDVFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYK 60
           G  ++   CWEDI  AI  A HL+YI GWS+Y ++ LVR+  RP   GG++ +G+LLK K
Sbjct: 203 GKNYEPHRCWEDIFDAITNAKHLIYITGWSVYTEISLVRDSRRP-KQGGDVTVGELLKKK 261

Query: 61  SQEGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSI 120
           + EGV+V++LVWDD+TS     +   G+M THDEET  FF+ + VNC+L PR      SI
Sbjct: 262 ASEGVKVILLVWDDRTSVD--LLKKDGLMATHDEETENFFRGTDVNCILCPRNPDDGGSI 319

Query: 121 FKQ 123
            + 
Sbjct: 320 VQN 322


>AT5G25370.1 | Symbols: PLDALPHA3 | PLDALPHA3 (PHOSPHLIPASE D ALPHA
           3); phospholipase D | chr5:8804240-8807547 REVERSE
          Length = 820

 Score =  113 bits (283), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 82/120 (68%), Gaps = 3/120 (2%)

Query: 3   VFKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYKSQ 62
           ++KH  CWE+I  AI EA HL+YI GWS+   V LVR+P R  P GG+L LG+LLK K++
Sbjct: 212 IYKHHRCWEEIFDAIWEAKHLIYIAGWSVNTDVTLVRDPKRTRP-GGDLKLGELLKKKAE 270

Query: 63  EGVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSIFK 122
           E V VLMLVWDD+TSH  F     G+M THD+ET  +FK++ V CVL PR   +  SI +
Sbjct: 271 ENVTVLMLVWDDRTSHEVF--KRDGLMMTHDQETYDYFKNTKVRCVLCPRNPDNGDSIVQ 328


>AT1G55180.1 | Symbols: PLDEPSILON, PLDALPHA4 | PLDEPSILON
           (PHOSPHOLIPASE D ALPHA 4); phospholipase D |
           chr1:20585057-20587629 REVERSE
          Length = 762

 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 2/109 (1%)

Query: 4   FKHDTCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGDLLKYKSQE 63
           F     WED+  AI  A HLVYI GW++   + LVR+    +P    + +G+LLK KS+E
Sbjct: 188 FNARNLWEDVYKAIESARHLVYIAGWALNPNLVLVRDNETEIPHAVGVTVGELLKRKSEE 247

Query: 64  GVRVLMLVWDDKTSHSKFFINTSGVMQTHDEETRKFFKHSSVNCVLSPR 112
           GV V +++W+D+TS     I   GVM+T+ E    +F++++V C L PR
Sbjct: 248 GVAVRVMLWNDETSLP--MIKNKGVMRTNVERALAYFRNTNVVCRLCPR 294