Jatropha Genome Database

JcCB0983611.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0983611.10 + phase: 0 /partial/short
         (40 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G23420.1 | Symbols: NAPRT2 | NAPRT2 (NICOTINATE PHOSPHORIBOSY...    65   1e-11
AT4G36940.1 | Symbols: NAPRT1 | NAPRT1 (NICOTINATE PHOSPHORIBOSY...    62   5e-11

>AT2G23420.1 | Symbols: NAPRT2 | NAPRT2 (NICOTINATE
           PHOSPHORIBOSYLTRANSFERASE 2); nicotinate
           phosphoribosyltransferase | chr2:9971819-9974909 FORWARD
          Length = 557

 Score = 64.7 bits (156), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/40 (72%), Positives = 33/40 (82%)

Query: 1   MGIRLDSGDLAYLSGEARKFFRAIEKEFGVPGFGKMSITA 40
           +GIRLDSGDLAYLS EAR FF  +E+E  VPGFGKM +TA
Sbjct: 326 LGIRLDSGDLAYLSREARNFFCTVERELKVPGFGKMVVTA 365


>AT4G36940.1 | Symbols: NAPRT1 | NAPRT1 (NICOTINATE
           PHOSPHORIBOSYLTRANSFERASE 1); nicotinate
           phosphoribosyltransferase | chr4:17416938-17419883
           FORWARD
          Length = 559

 Score = 62.4 bits (150), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/40 (72%), Positives = 33/40 (82%)

Query: 1   MGIRLDSGDLAYLSGEARKFFRAIEKEFGVPGFGKMSITA 40
           +GIRLDSGDLAYLS E RKFF AIE++  VP FGKM +TA
Sbjct: 328 VGIRLDSGDLAYLSTEVRKFFCAIERDLKVPDFGKMIVTA 367