Jatropha Genome Database

JcCB0983031.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0983031.10 + phase: 1 /partial
         (152 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G38900.1 | Symbols:  | DSBA oxidoreductase family protein | c...   194   2e-50

>AT5G38900.1 | Symbols:  | DSBA oxidoreductase family protein |
           chr5:15573745-15574945 REVERSE
          Length = 217

 Score =  194 bits (492), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 89/147 (60%), Positives = 113/147 (76%)

Query: 5   LFQQRFGSRTDAVLNQLREALRGVGLEFNICELFGNSLESHRLIHFAGQQGLDKQHNLAE 64
            + Q++G+R   +  ++ E  +G+GLEF+   L GNSL+SHRLIH+ G+Q  +KQH L E
Sbjct: 70  FYLQKYGNRYQGMFARMSEVFKGLGLEFDTAGLTGNSLDSHRLIHYTGKQAPEKQHTLVE 129

Query: 65  ELFLGYFTKAKYIGDREFLLECAEKVGVEGAAEFLQDPNNGVKEVYEDLHKYSAGLTGVP 124
           ELF+GYFT+ K+IGDREFL+E A KVG+EGA EFL DPNNGV EV E+L KYS  +TGVP
Sbjct: 130 ELFIGYFTQGKFIGDREFLVETANKVGIEGAEEFLSDPNNGVTEVKEELAKYSKNITGVP 189

Query: 125 NYVINGKKKLNGAQPPEVFLRAFEAAA 151
           NY INGK KL+GAQPPE F  AF+AA+
Sbjct: 190 NYTINGKVKLSGAQPPETFQSAFKAAS 216