Jatropha Genome Database
- JcCB0982161.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0982161.10 + phase: 0 /partial
(135 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein... 270 2e-73
AT1G03840.1 | Symbols: MGP | MGP (Magpie); nucleic acid binding ... 267 1e-72
AT1G03840.2 | Symbols: MGP | MGP (Magpie); nucleic acid binding ... 266 4e-72
AT3G50700.1 | Symbols: AtIDD2 | AtIDD2 (Arabidopsis thaliana Ind... 264 1e-71
AT2G02080.1 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana Ind... 259 3e-70
AT5G44160.1 | Symbols: NUC | NUC (nutcracker); nucleic acid bind... 257 1e-69
AT2G02070.1 | Symbols: AtIDD5 | AtIDD5 (Arabidopsis thaliana Ind... 257 2e-69
AT3G13810.1 | Symbols: AtIDD11 | AtIDD11 (Arabidopsis thaliana I... 255 6e-69
AT4G02670.1 | Symbols: AtIDD12 | AtIDD12 (Arabidopsis thaliana I... 254 9e-69
AT1G55110.1 | Symbols: AtIDD7 | AtIDD7 (Arabidopsis thaliana Ind... 253 2e-68
AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding... 253 3e-68
AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein... 253 3e-68
AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein... 249 3e-67
AT5G60470.1 | Symbols: | nucleic acid binding / transcription f... 243 2e-65
AT2G02080.2 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana Ind... 233 3e-62
AT1G68130.1 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana I... 211 2e-55
AT2G01940.1 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 209 4e-55
AT1G25250.1 | Symbols: AtIDD16 | AtIDD16 (Arabidopsis thaliana I... 207 2e-54
AT2G01940.3 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 205 6e-54
AT1G68130.2 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana I... 146 4e-36
AT2G01940.2 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 143 3e-35
AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 88 2e-18
AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 87 2e-18
AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 87 2e-18
AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein... 82 8e-17
AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4)... 76 6e-15
AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3)... 75 9e-15
AT1G34790.1 | Symbols: TT1 | TT1 (transparent testa 1); transcri... 75 2e-14
AT1G13290.1 | Symbols: DOT5 | DOT5 (DEFECTIVELY ORGANIZED TRIBUT... 75 2e-14
AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5)... 74 3e-14
AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nuclei... 73 5e-14
>AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:26641914-26643883 REVERSE
Length = 500
Score = 270 bits (690), Expect = 2e-73, Method: Composition-based stats.
Identities = 118/133 (88%), Positives = 127/133 (95%)
Query: 2 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRV 61
DPDAEVIALSPKTL+ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL+QR++KE RK+V
Sbjct: 42 DPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKV 101
Query: 62 YVCPEKSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGT 121
YVCP CVHH+P+RALGDLTGIKKHFCRKHGEKKWKCE+CSKKYAVQSDWKAH K CGT
Sbjct: 102 YVCPVSGCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGT 161
Query: 122 REYKCDCGTLFSR 134
+EYKCDCGTLFSR
Sbjct: 162 KEYKCDCGTLFSR 174
>AT1G03840.1 | Symbols: MGP | MGP (Magpie); nucleic acid binding /
protein binding / transcription factor/ zinc ion binding
| chr1:967596-970058 REVERSE
Length = 506
Score = 267 bits (683), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 120/133 (90%), Positives = 129/133 (96%)
Query: 2 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRV 61
DP+AEVIALSPKTL+ATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKLKQRTSKE RKRV
Sbjct: 51 DPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRV 110
Query: 62 YVCPEKSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGT 121
YVCPEKSCVHH+P RALGDLTGIKKHFCRKHGEKKWKCE+C+K+YAVQSDWKAH KTCGT
Sbjct: 111 YVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGT 170
Query: 122 REYKCDCGTLFSR 134
REY+CDCGT+FSR
Sbjct: 171 REYRCDCGTIFSR 183
>AT1G03840.2 | Symbols: MGP | MGP (Magpie); nucleic acid binding /
protein binding / transcription factor/ zinc ion binding
| chr1:967596-970058 REVERSE
Length = 504
Score = 266 bits (679), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 119/133 (89%), Positives = 129/133 (96%)
Query: 2 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRV 61
+P+AEVIALSPKTL+ATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKLKQRTSKE RKRV
Sbjct: 49 NPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRV 108
Query: 62 YVCPEKSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGT 121
YVCPEKSCVHH+P RALGDLTGIKKHFCRKHGEKKWKCE+C+K+YAVQSDWKAH KTCGT
Sbjct: 109 YVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGT 168
Query: 122 REYKCDCGTLFSR 134
REY+CDCGT+FSR
Sbjct: 169 REYRCDCGTIFSR 181
>AT3G50700.1 | Symbols: AtIDD2 | AtIDD2 (Arabidopsis thaliana
Indeterminate(ID)-Domain 2); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:18840945-18842829 FORWARD
Length = 452
Score = 264 bits (675), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 116/133 (87%), Positives = 129/133 (96%)
Query: 2 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRV 61
DP++EVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL+Q+++KE +K+V
Sbjct: 44 DPESEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKV 103
Query: 62 YVCPEKSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGT 121
YVCPE SCVHH+P+RALGDLTGIKKHFCRKHGEKKWKC++CSKKYAVQSDWKAH K CGT
Sbjct: 104 YVCPEVSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGT 163
Query: 122 REYKCDCGTLFSR 134
+EYKCDCGTLFSR
Sbjct: 164 KEYKCDCGTLFSR 176
>AT2G02080.1 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana
Indeterminate(ID)-Domain 4); transcription factor |
chr2:518328-521170 REVERSE
Length = 516
Score = 259 bits (663), Expect = 3e-70, Method: Composition-based stats.
Identities = 106/133 (79%), Positives = 129/133 (96%)
Query: 2 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRV 61
+PDAEV+ALSPKTL+ATNRF+C++CNKGFQR+QNLQLHRRGHNLPWKLKQ+++KE +++V
Sbjct: 64 NPDAEVVALSPKTLMATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKV 123
Query: 62 YVCPEKSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGT 121
Y+CPE +CVHH+P+RALGDLTGIKKH+ RKHGEKKWKCE+CSK+YAVQSDWKAH KTCGT
Sbjct: 124 YLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGT 183
Query: 122 REYKCDCGTLFSR 134
+EY+CDCGT+FSR
Sbjct: 184 KEYRCDCGTIFSR 196
>AT5G44160.1 | Symbols: NUC | NUC (nutcracker); nucleic acid binding
/ transcription factor/ zinc ion binding |
chr5:17773091-17775513 FORWARD
Length = 466
Score = 257 bits (657), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 115/133 (86%), Positives = 127/133 (95%)
Query: 2 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRV 61
DP+AEVIALSP TL+ATNRF+CE+C KGFQRDQNLQLHRRGHNLPWKLKQRTSKE RKRV
Sbjct: 47 DPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRV 106
Query: 62 YVCPEKSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGT 121
YVCPEK+CVHH+ +RALGDLTGIKKHFCRKHGEKKW CE+C+K+YAVQSDWKAH KTCGT
Sbjct: 107 YVCPEKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGT 166
Query: 122 REYKCDCGTLFSR 134
REY+CDCGT+FSR
Sbjct: 167 REYRCDCGTIFSR 179
>AT2G02070.1 | Symbols: AtIDD5 | AtIDD5 (Arabidopsis thaliana
Indeterminate(ID)-Domain 5); nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:505523-509154 FORWARD
Length = 602
Score = 257 bits (656), Expect = 2e-69, Method: Composition-based stats.
Identities = 108/133 (81%), Positives = 128/133 (96%)
Query: 2 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRV 61
+ DAEVIALSPKTL+ATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKLKQ+++KE +++V
Sbjct: 62 NSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKV 121
Query: 62 YVCPEKSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGT 121
Y+CPE SCVHH+P+RALGDLTGIKKH+ RKHGEKKWKC++CSK+YAVQSDWKAH KTCGT
Sbjct: 122 YLCPEPSCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGT 181
Query: 122 REYKCDCGTLFSR 134
+EY+CDCGTLFSR
Sbjct: 182 KEYRCDCGTLFSR 194
>AT3G13810.1 | Symbols: AtIDD11 | AtIDD11 (Arabidopsis thaliana
Indeterminate(ID)-Domain 11); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:4544941-4547300 FORWARD
Length = 513
Score = 255 bits (651), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 117/134 (87%), Positives = 129/134 (96%), Gaps = 1/134 (0%)
Query: 2 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEP-RKR 60
DP++EVIALSPKTL+ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQR++KE RK+
Sbjct: 80 DPESEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIRKK 139
Query: 61 VYVCPEKSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCG 120
VYVCPE SCVHH+P+RALGDLTGIKKHFCRKHGEKKWKC++CSKKYAVQSD KAH KTCG
Sbjct: 140 VYVCPEASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKTCG 199
Query: 121 TREYKCDCGTLFSR 134
T+EY+CDCGTLFSR
Sbjct: 200 TKEYRCDCGTLFSR 213
>AT4G02670.1 | Symbols: AtIDD12 | AtIDD12 (Arabidopsis thaliana
Indeterminate(ID)-Domain 12); nucleic acid binding /
transcription factor/ zinc ion binding |
chr4:1176190-1178489 REVERSE
Length = 402
Score = 254 bits (650), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 116/134 (86%), Positives = 126/134 (94%), Gaps = 1/134 (0%)
Query: 2 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEP-RKR 60
DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ+ +KE +K+
Sbjct: 63 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQKNTKEQQKKK 122
Query: 61 VYVCPEKSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCG 120
VYVCPE +C HH+P+RALGDLTGIKKHFCRKHGEKKWKCE+CSK YAVQSDWKAH K CG
Sbjct: 123 VYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKICG 182
Query: 121 TREYKCDCGTLFSR 134
TR+Y+CDCGTLFSR
Sbjct: 183 TRDYRCDCGTLFSR 196
>AT1G55110.1 | Symbols: AtIDD7 | AtIDD7 (Arabidopsis thaliana
Indeterminate(ID)-Domain 7); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:20560406-20562625 REVERSE
Length = 455
Score = 253 bits (646), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 114/134 (85%), Positives = 128/134 (95%), Gaps = 1/134 (0%)
Query: 2 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEP-RKR 60
DP+AEV+ALSPKTL+ATNRF+CE+CNKGFQRDQNLQLH+RGHNLPWKLKQR++K+ RK+
Sbjct: 73 DPEAEVMALSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKK 132
Query: 61 VYVCPEKSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCG 120
VYVCPE CVHH+P+RALGDLTGIKKHF RKHGEKKWKCE+CSKKYAVQSDWKAH KTCG
Sbjct: 133 VYVCPEPGCVHHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCG 192
Query: 121 TREYKCDCGTLFSR 134
T+EYKCDCGTLFSR
Sbjct: 193 TKEYKCDCGTLFSR 206
>AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding /
protein binding / protein homodimerization/
transcription factor/ zinc ion binding |
chr5:745849-748678 FORWARD
Length = 503
Score = 253 bits (645), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 114/134 (85%), Positives = 126/134 (94%), Gaps = 1/134 (0%)
Query: 2 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEP-RKR 60
DPDA+VIALSP TL+ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQR+ +E +K+
Sbjct: 63 DPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKK 122
Query: 61 VYVCPEKSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCG 120
VY+CP K+CVHH+ +RALGDLTGIKKH+ RKHGEKKWKCE+CSKKYAVQSDWKAH KTCG
Sbjct: 123 VYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCG 182
Query: 121 TREYKCDCGTLFSR 134
TREYKCDCGTLFSR
Sbjct: 183 TREYKCDCGTLFSR 196
>AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr1:4990070-4992442 FORWARD
Length = 467
Score = 253 bits (645), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 109/133 (81%), Positives = 129/133 (96%)
Query: 2 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRV 61
+PDAEVIALSPKT++ATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKLKQ+++KE R++V
Sbjct: 63 NPDAEVIALSPKTIMATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEVRRKV 122
Query: 62 YVCPEKSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGT 121
Y+CPE SCVHH+PARALGDLTGIKKH+ RKHGEKKWKC++CSK+YAVQSDWKAH KTCGT
Sbjct: 123 YLCPEPSCVHHDPARALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGT 182
Query: 122 REYKCDCGTLFSR 134
+EY+CDCGT+FSR
Sbjct: 183 KEYRCDCGTIFSR 195
>AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr3:16596850-16598550 REVERSE
Length = 446
Score = 249 bits (637), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 111/134 (82%), Positives = 126/134 (94%), Gaps = 1/134 (0%)
Query: 2 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEP-RKR 60
DPDAEVIALSP +L+ TNRF+CE+CNKGF+RDQNLQLHRRGHNLPWKLKQRT+KE +K+
Sbjct: 49 DPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEQVKKK 108
Query: 61 VYVCPEKSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCG 120
VY+CPEK+CVHH+PARALGDLTGIKKHF RKHGEKKWKC++CSKKYAV SDWKAH K CG
Sbjct: 109 VYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKICG 168
Query: 121 TREYKCDCGTLFSR 134
T+EY+CDCGTLFSR
Sbjct: 169 TKEYRCDCGTLFSR 182
>AT5G60470.1 | Symbols: | nucleic acid binding / transcription
factor/ zinc ion binding | chr5:24320614-24322790
FORWARD
Length = 450
Score = 243 bits (621), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 108/133 (81%), Positives = 126/133 (94%), Gaps = 1/133 (0%)
Query: 3 PDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSK-EPRKRV 61
P+AEVI+LSPK+L+ATNRF CEICNKGFQR+QNLQLH+RGHNLPWKLKQ+T+K + +K+V
Sbjct: 46 PNAEVISLSPKSLMATNRFFCEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQVKKKV 105
Query: 62 YVCPEKSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGT 121
Y+CPEKSCVHH+PARALGDLTGIKKHF RKHGEKKWKC++CSKKYAV SDWKAH K CG+
Sbjct: 106 YICPEKSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGS 165
Query: 122 REYKCDCGTLFSR 134
RE++CDCGTLFSR
Sbjct: 166 REFRCDCGTLFSR 178
>AT2G02080.2 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana
Indeterminate(ID)-Domain 4); transcription factor |
chr2:518328-520619 REVERSE
Length = 439
Score = 233 bits (594), Expect = 3e-62, Method: Composition-based stats.
Identities = 94/119 (78%), Positives = 115/119 (96%)
Query: 16 LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRVYVCPEKSCVHHNPA 75
+ATNRF+C++CNKGFQR+QNLQLHRRGHNLPWKLKQ+++KE +++VY+CPE +CVHH+P+
Sbjct: 1 MATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPS 60
Query: 76 RALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGTREYKCDCGTLFSR 134
RALGDLTGIKKH+ RKHGEKKWKCE+CSK+YAVQSDWKAH KTCGT+EY+CDCGT+FSR
Sbjct: 61 RALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSR 119
>AT1G68130.1 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana
Indeterminate(ID)-Domain 14); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:25532484-25534317 FORWARD
Length = 419
Score = 211 bits (536), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 96/136 (70%), Positives = 116/136 (85%), Gaps = 2/136 (1%)
Query: 2 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK-LKQRTSKEPRKR 60
DP+AEV++LSP+TLL ++R+VCEICN+GFQRDQNLQ+HRR H +PWK LK+ T++E RKR
Sbjct: 51 DPEAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETNEEVRKR 110
Query: 61 VYVCPEKSCVHHNPARALGDLTGIKKHFCRKHGE-KKWKCERCSKKYAVQSDWKAHMKTC 119
VYVCPE +C+HHNP ALGDL GIKKHF RKH K+W CERCSK YAVQSD+KAH+KTC
Sbjct: 111 VYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWICERCSKGYAVQSDYKAHLKTC 170
Query: 120 GTREYKCDCGTLFSRF 135
GTR + CDCG +FSR
Sbjct: 171 GTRGHSCDCGRVFSRV 186
>AT2G01940.1 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:432652-434917 FORWARD
Length = 445
Score = 209 bits (532), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 94/136 (69%), Positives = 114/136 (83%), Gaps = 2/136 (1%)
Query: 2 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSK-EPRKR 60
DPDAEV++LSP+TLL ++R++CEICN+GFQRDQNLQ+HRR H +PWKL +R + E +KR
Sbjct: 54 DPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVKKR 113
Query: 61 VYVCPEKSCVHHNPARALGDLTGIKKHFCRKHGE-KKWKCERCSKKYAVQSDWKAHMKTC 119
VYVCPE +C+HHNP ALGDL GIKKHF RKH K+W CERCSK YAVQSD+KAH+KTC
Sbjct: 114 VYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTC 173
Query: 120 GTREYKCDCGTLFSRF 135
GTR + CDCG +FSR
Sbjct: 174 GTRGHSCDCGRVFSRV 189
>AT1G25250.1 | Symbols: AtIDD16 | AtIDD16 (Arabidopsis thaliana
Indeterminate(ID)-Domain 16); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:8849549-8851520 FORWARD
Length = 362
Score = 207 bits (526), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 95/138 (68%), Positives = 115/138 (83%), Gaps = 3/138 (2%)
Query: 1 SDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSK--EPR 58
+DPDAEV++LSP+TLL ++R+VCEICN+GFQRDQNLQ+HRR H +PWKL +R K E R
Sbjct: 19 TDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVR 78
Query: 59 KRVYVCPEKSCVHHNPARALGDLTGIKKHFCRKHG-EKKWKCERCSKKYAVQSDWKAHMK 117
KRVYVCPE +C+HH+P ALGDL GIKKHF RKH K+W CERCSK YAVQSD+KAH+K
Sbjct: 79 KRVYVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLK 138
Query: 118 TCGTREYKCDCGTLFSRF 135
TCG+R + CDCG +FSR
Sbjct: 139 TCGSRGHSCDCGRVFSRV 156
>AT2G01940.3 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:432652-434917 FORWARD
Length = 446
Score = 205 bits (522), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 94/136 (69%), Positives = 113/136 (83%), Gaps = 3/136 (2%)
Query: 2 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSK-EPRKR 60
DPDAEV++LSP+TLL ++R++CEICN+GFQRDQNLQ+HRR H +PWKL +R + E +KR
Sbjct: 54 DPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVKKR 113
Query: 61 VYVCPEKSCVHHNPARALGDLTGIKKHFCRKHGE-KKWKCERCSKKYAVQSDWKAHMKTC 119
VYVCPE +C+HHNP ALGDL GIKKHF RKH K+W CERCSK YAVQSD+KAH+KTC
Sbjct: 114 VYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTC 173
Query: 120 GTREYKCDCGTLFSRF 135
GTR + CDCG FS F
Sbjct: 174 GTRGHSCDCG-FFSSF 188
>AT1G68130.2 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana
Indeterminate(ID)-Domain 14); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:25532843-25534317 FORWARD
Length = 333
Score = 146 bits (369), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/100 (69%), Positives = 81/100 (81%), Gaps = 2/100 (2%)
Query: 38 LHRRGHNLPWKL-KQRTSKEPRKRVYVCPEKSCVHHNPARALGDLTGIKKHFCRKHGE-K 95
+HRR H +PWKL K+ T++E RKRVYVCPE +C+HHNP ALGDL GIKKHF RKH K
Sbjct: 1 MHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 96 KWKCERCSKKYAVQSDWKAHMKTCGTREYKCDCGTLFSRF 135
+W CERCSK YAVQSD+KAH+KTCGTR + CDCG +FSR
Sbjct: 61 QWICERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRV 100
>AT2G01940.2 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:433232-434917 FORWARD
Length = 356
Score = 143 bits (360), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 79/100 (79%), Gaps = 2/100 (2%)
Query: 38 LHRRGHNLPWKLKQRTSK-EPRKRVYVCPEKSCVHHNPARALGDLTGIKKHFCRKHGE-K 95
+HRR H +PWKL +R + E +KRVYVCPE +C+HHNP ALGDL GIKKHF RKH K
Sbjct: 1 MHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 96 KWKCERCSKKYAVQSDWKAHMKTCGTREYKCDCGTLFSRF 135
+W CERCSK YAVQSD+KAH+KTCGTR + CDCG +FSR
Sbjct: 61 QWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRV 100
>AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551449-12552501
FORWARD
Length = 350
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 14/143 (9%)
Query: 6 EVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRV---- 61
E++ L + +LA + C IC KGF+RD NL++H RGH +K +K ++ V
Sbjct: 80 EILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSE 139
Query: 62 ------YVCPEKSC---VHHNPARALGDLTGIKKHFCRKHGEKKWKCERC-SKKYAVQSD 111
Y CP C H + L + +K H+ R H +K + C RC +KK++V +D
Sbjct: 140 PMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIAD 199
Query: 112 WKAHMKTCGTREYKCDCGTLFSR 134
K H K CG ++ C CGT FSR
Sbjct: 200 LKTHEKHCGKNKWLCSCGTTFSR 222
>AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551002-12552501
FORWARD
Length = 499
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 14/143 (9%)
Query: 6 EVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRV---- 61
E++ L + +LA + C IC KGF+RD NL++H RGH +K +K ++ V
Sbjct: 229 EILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSE 288
Query: 62 ------YVCPEKSC---VHHNPARALGDLTGIKKHFCRKHGEKKWKCERC-SKKYAVQSD 111
Y CP C H + L + +K H+ R H +K + C RC +KK++V +D
Sbjct: 289 PMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIAD 348
Query: 112 WKAHMKTCGTREYKCDCGTLFSR 134
K H K CG ++ C CGT FSR
Sbjct: 349 LKTHEKHCGKNKWLCSCGTTFSR 371
>AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551002-12552501
FORWARD
Length = 499
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 14/143 (9%)
Query: 6 EVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRV---- 61
E++ L + +LA + C IC KGF+RD NL++H RGH +K +K ++ V
Sbjct: 229 EILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSE 288
Query: 62 ------YVCPEKSC---VHHNPARALGDLTGIKKHFCRKHGEKKWKCERC-SKKYAVQSD 111
Y CP C H + L + +K H+ R H +K + C RC +KK++V +D
Sbjct: 289 PMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIAD 348
Query: 112 WKAHMKTCGTREYKCDCGTLFSR 134
K H K CG ++ C CGT FSR
Sbjct: 349 LKTHEKHCGKNKWLCSCGTTFSR 371
>AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:7653541-7654662 REVERSE
Length = 373
Score = 82.4 bits (202), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 14/148 (9%)
Query: 1 SDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQR----TSKE 56
S +++ L LLA C+IC KGF+RD NL++H R H +K ++ TS++
Sbjct: 197 SSGSYDILELDVADLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKTREALISPTSQD 256
Query: 57 P------RKRVYVCPEKSC---VHHNPARALGDLTGIKKHFCRKHGEKKWKCERCS-KKY 106
+K Y CP+ C H + L + K H+ R H K + C RCS K +
Sbjct: 257 KKGGYSLKKHYYSCPQHGCRWNQRHEKFQPLKSVICAKNHYKRSHCPKMYMCRRCSVKHF 316
Query: 107 AVQSDWKAHMKTCGTREYKCDCGTLFSR 134
+V SD + H K CG ++ C CGT FSR
Sbjct: 317 SVLSDLRTHEKHCGDIKWVCSCGTKFSR 344
>AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4) |
chr3:7313759-7315792 REVERSE
Length = 412
Score = 75.9 bits (185), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 8 IALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRT--SKEPRKRV---- 61
I + L+ +F C +C K F R N+Q+H GH ++ + +P +
Sbjct: 243 IPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPC 302
Query: 62 YVCPE--KSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTC 119
Y C K+ + H AR L D ++ H+ RKHG + + C RC K +AV+ DW+ H K C
Sbjct: 303 YCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNC 362
Query: 120 GTREYKCDCGTLF 132
G Y C CG+ F
Sbjct: 363 GKLWY-CSCGSDF 374
>AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3) |
chr1:2610680-2613180 REVERSE
Length = 337
Score = 75.5 bits (184), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 71/146 (48%), Gaps = 16/146 (10%)
Query: 2 DPDAEV------IALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK-----LK 50
D D EV I + + +F C IC+K F R N+Q+H GH ++ LK
Sbjct: 155 DSDVEVCGKRFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLK 214
Query: 51 QRTSKEPRKRV--YVCPE--KSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKY 106
R+ Y C E K+ ++H ++ L D ++ H+ RKHG K + C +C K
Sbjct: 215 GTIQPAAILRLPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKAL 274
Query: 107 AVQSDWKAHMKTCGTREYKCDCGTLF 132
AV+ DW+ H K CG Y C CG+ F
Sbjct: 275 AVKGDWRTHEKNCGKLWY-CTCGSDF 299
>AT1G34790.1 | Symbols: TT1 | TT1 (transparent testa 1);
transcription factor | chr1:12763953-12765489 FORWARD
Length = 303
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 8 IALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSK--EPRKRV---- 61
I + L+ F C +C K F R NLQ+H GH ++ + K +PR +
Sbjct: 132 IPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPC 191
Query: 62 YVCPE--KSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTC 119
Y C E ++ + H ++ L D ++ H+ RKHG K + C C K AV+ DW+ H K C
Sbjct: 192 YCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNC 251
Query: 120 GTREYKCDCGTLF 132
G R + C CG+ F
Sbjct: 252 GKR-WVCVCGSDF 263
>AT1G13290.1 | Symbols: DOT5 | DOT5 (DEFECTIVELY ORGANIZED
TRIBUTARIES 5); transcription factor |
chr1:4550366-4551527 REVERSE
Length = 302
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 11/130 (8%)
Query: 13 KTLLATNRFVCEICNKGFQRDQNLQLHRRGHNL-----PWKLKQRTSKEPRKRV--YVCP 65
+ L+ +F C +CNK F R N+Q+H GH P L+ S R+ Y C
Sbjct: 93 QILVGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCA 152
Query: 66 E--KSCVHHNPARALGDLTGIKKHFCRKHGEKKWKC-ERCSKKYAVQSDWKAHMKTCGTR 122
E K+ + H ++ L D ++ H+ RKHG K ++C ++C K +AV+ DW+ H K CG +
Sbjct: 153 EGCKNNIDHPRSKPLKDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCG-K 211
Query: 123 EYKCDCGTLF 132
+ C CG+ F
Sbjct: 212 LWFCVCGSDF 221
>AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5) |
chr1:18989925-18992034 REVERSE
Length = 337
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 8 IALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRT--SKEP----RKRV 61
I + L+ +F C +C K F R N+Q+H GH ++ + +P R
Sbjct: 165 IPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPC 224
Query: 62 YVCPE--KSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTC 119
+ C K+ + H A+ L D ++ H+ RKHG K + C C K +AV+ DW+ H K C
Sbjct: 225 FCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNC 284
Query: 120 GTREYKCDCGTLF 132
G Y C CG+ F
Sbjct: 285 GKLWY-CSCGSDF 296
>AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nucleic
acid binding / transcription factor/ zinc ion binding |
chr3:21370936-21373121 FORWARD
Length = 383
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 8 IALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRT--SKEP----RKRV 61
I + L+ +F C +C K F R N+Q+H GH ++ + +P R
Sbjct: 204 IPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPC 263
Query: 62 YVCPE--KSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTC 119
Y C ++ + H A+ L D ++ H+ RKHG K + C +C K +AV+ DW+ H K C
Sbjct: 264 YCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNC 323
Query: 120 GTREYKCDCGTLF 132
G Y C CG+ F
Sbjct: 324 GKLWY-CICGSDF 335