Jatropha Genome Database
- JcCB0969631.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0969631.10 + phase: 1 /partial
(71 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G32410.1 | Symbols: CESA1, RSW1 | CESA1 (CELLULOSE SYNTHASE 1... 110 2e-25
AT5G64740.1 | Symbols: CESA6, IXR2, E112, PRC1 | CESA6 (CELLULOS... 106 3e-24
AT5G05170.1 | Symbols: CESA3, IXR1, ATCESA3, ATH-B, CEV1 | CEV1 ... 106 3e-24
AT4G39350.1 | Symbols: CESA2, ATH-A, ATCESA2 | CESA2 (CELLULOSE ... 106 3e-24
AT2G25540.1 | Symbols: CESA10 | CESA10 (CELLULOSE SYNTHASE 10); ... 104 1e-23
AT5G44030.1 | Symbols: CESA4, IRX5, NWS2 | CESA4 (CELLULOSE SYNT... 103 2e-23
AT5G09870.1 | Symbols: CESA5 | CESA5 (CELLULOSE SYNTHASE 5); cel... 103 3e-23
AT2G21770.1 | Symbols: CESA9, CESA09 | CESA9 (CELLULOSE SYNTHASE... 102 6e-23
AT5G17420.1 | Symbols: IRX3, CESA7, ATCESA7, MUR10 | IRX3 (IRREG... 101 1e-22
AT4G18780.1 | Symbols: CESA8, IRX1, ATCESA8, LEW2 | IRX1 (IRREGU... 96 5e-21
AT1G02730.1 | Symbols: ATCSLD5, CSLD5 | ATCSLD5; 1,4-beta-D-xyla... 60 3e-10
AT5G16910.1 | Symbols: ATCSLD2, CSLD2 | CSLD2 (CELLULOSE-SYNTHAS... 56 5e-09
AT3G03050.1 | Symbols: CSLD3, KJK, ATCSLD3 | CSLD3 (CELLULOSE SY... 55 1e-08
AT2G33100.1 | Symbols: ATCSLD1, CSLD1 | ATCSLD1; cellulose synth... 54 2e-08
AT1G32180.1 | Symbols: ATCSLD6, CSLD6 | ATCSLD6; cellulose synth... 52 1e-07
AT4G38190.1 | Symbols: ATCSLD4, CSLD4 | ATCSLD4; cellulose synth... 52 1e-07
>AT4G32410.1 | Symbols: CESA1, RSW1 | CESA1 (CELLULOSE SYNTHASE 1);
cellulose synthase/ transferase, transferring glycosyl
groups | chr4:15641009-15646388 REVERSE
Length = 1081
Score = 110 bits (274), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/70 (65%), Positives = 58/70 (82%)
Query: 2 EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
+DE + +M + +EK+FGQSPVF+A+T +E GG +PA+LLKEAIHVISCGYEDKTE
Sbjct: 706 DDERSILMSQRSVEKRFGQSPVFIAATFMEQGGIPPTTNPATLLKEAIHVISCGYEDKTE 765
Query: 62 WGKEVGWIYG 71
WGKE+GWIYG
Sbjct: 766 WGKEIGWIYG 775
>AT5G64740.1 | Symbols: CESA6, IXR2, E112, PRC1 | CESA6 (CELLULOSE
SYNTHASE 6); cellulose synthase/ transferase,
transferring glycosyl groups | chr5:25881555-25886333
FORWARD
Length = 1084
Score = 106 bits (265), Expect = 3e-24, Method: Composition-based stats.
Identities = 48/59 (81%), Positives = 52/59 (88%)
Query: 13 KLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTEWGKEVGWIYG 71
KLEKKFGQSPVFVAS +E+GG + ASPA LLKEAI VISCGYEDKTEWGKE+GWIYG
Sbjct: 722 KLEKKFGQSPVFVASARMENGGMARNASPACLLKEAIQVISCGYEDKTEWGKEIGWIYG 780
>AT5G05170.1 | Symbols: CESA3, IXR1, ATCESA3, ATH-B, CEV1 | CEV1
(CONSTITUTIVE EXPRESSION OF VSP 1); cellulose synthase/
transferase, transferring glycosyl groups |
chr5:1530401-1535090 REVERSE
Length = 1065
Score = 106 bits (264), Expect = 3e-24, Method: Composition-based stats.
Identities = 47/70 (67%), Positives = 58/70 (82%)
Query: 2 EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
+DE A +M + LEK+FGQS VFVASTL+E+GG A+P +LLKEAIHVISCGYEDK++
Sbjct: 691 DDEKALLMSQMSLEKRFGQSAVFVASTLMENGGVPPSATPENLLKEAIHVISCGYEDKSD 750
Query: 62 WGKEVGWIYG 71
WG E+GWIYG
Sbjct: 751 WGMEIGWIYG 760
>AT4G39350.1 | Symbols: CESA2, ATH-A, ATCESA2 | CESA2 (CELLULOSE
SYNTHASE A2); cellulose synthase/ transferase,
transferring glycosyl groups | chr4:18297078-18301890
FORWARD
Length = 1084
Score = 106 bits (264), Expect = 3e-24, Method: Composition-based stats.
Identities = 47/59 (79%), Positives = 53/59 (89%)
Query: 13 KLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTEWGKEVGWIYG 71
KLEKKFGQSPVFVAS +L++GG + ASPA LL+EAI VISCGYEDKTEWGKE+GWIYG
Sbjct: 721 KLEKKFGQSPVFVASAVLQNGGVPRNASPACLLREAIQVISCGYEDKTEWGKEIGWIYG 779
>AT2G25540.1 | Symbols: CESA10 | CESA10 (CELLULOSE SYNTHASE 10);
cellulose synthase/ transferase, transferring glycosyl
groups | chr2:10867070-10872077 REVERSE
Length = 1065
Score = 104 bits (260), Expect = 1e-23, Method: Composition-based stats.
Identities = 44/70 (62%), Positives = 57/70 (81%)
Query: 2 EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
EDE + ++ + +LEK+FGQSPVF+A+T +E GG +P +LLKEAIHVISCGYE KT+
Sbjct: 693 EDEMSLLVSQKRLEKRFGQSPVFIAATFMEQGGLPSTTNPLTLLKEAIHVISCGYEAKTD 752
Query: 62 WGKEVGWIYG 71
WGKE+GWIYG
Sbjct: 753 WGKEIGWIYG 762
>AT5G44030.1 | Symbols: CESA4, IRX5, NWS2 | CESA4 (CELLULOSE
SYNTHASE A4); cellulose synthase/ transferase,
transferring glycosyl groups | chr5:17714713-17719564
FORWARD
Length = 1049
Score = 103 bits (258), Expect = 2e-23, Method: Composition-based stats.
Identities = 44/70 (62%), Positives = 58/70 (82%)
Query: 2 EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
E E +++M + EK+FG SPVF+ASTL+E+GG + + +SL+KEAIHVISCGYE+KTE
Sbjct: 674 ELEKSSLMSQKNFEKRFGMSPVFIASTLMENGGLPEATNTSSLIKEAIHVISCGYEEKTE 733
Query: 62 WGKEVGWIYG 71
WGKE+GWIYG
Sbjct: 734 WGKEIGWIYG 743
>AT5G09870.1 | Symbols: CESA5 | CESA5 (CELLULOSE SYNTHASE 5);
cellulose synthase/ transferase, transferring glycosyl
groups | chr5:3073356-3077974 FORWARD
Length = 1069
Score = 103 bits (256), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 58/71 (81%), Gaps = 3/71 (4%)
Query: 4 ENAAVMPEN---KLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKT 60
+AA PE KLEKKFGQSPVFVAS +E+GG + ASPASLL+EAI VISCGYEDKT
Sbjct: 695 NDAAKSPEAAQLKLEKKFGQSPVFVASAGMENGGLARNASPASLLREAIQVISCGYEDKT 754
Query: 61 EWGKEVGWIYG 71
EWGKE+GWIYG
Sbjct: 755 EWGKEIGWIYG 765
>AT2G21770.1 | Symbols: CESA9, CESA09 | CESA9 (CELLULOSE SYNTHASE
A9); cellulose synthase/ transferase, transferring
glycosyl groups | chr2:9284837-9289495 FORWARD
Length = 1088
Score = 102 bits (253), Expect = 6e-23, Method: Composition-based stats.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 4 ENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTEWG 63
EN + + KLEKKFGQSPV VASTLL +GG +PASLL+E+I VISCGYE+KTEWG
Sbjct: 716 ENNSETAQLKLEKKFGQSPVLVASTLLLNGGVPSNVNPASLLRESIQVISCGYEEKTEWG 775
Query: 64 KEVGWIYG 71
KE+GWIYG
Sbjct: 776 KEIGWIYG 783
>AT5G17420.1 | Symbols: IRX3, CESA7, ATCESA7, MUR10 | IRX3
(IRREGULAR XYLEM 3); cellulose synthase |
chr5:5736859-5741407 REVERSE
Length = 1026
Score = 101 bits (251), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/70 (65%), Positives = 53/70 (75%)
Query: 2 EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
E + +M E EK FGQS +FV STL+E+GG +SPA LLKEAIHVISCGYEDKTE
Sbjct: 652 EGDKEHLMSEMNFEKTFGQSSIFVTSTLMEEGGVPPSSSPAVLLKEAIHVISCGYEDKTE 711
Query: 62 WGKEVGWIYG 71
WG E+GWIYG
Sbjct: 712 WGTELGWIYG 721
>AT4G18780.1 | Symbols: CESA8, IRX1, ATCESA8, LEW2 | IRX1 (IRREGULAR
XYLEM 1); cellulose synthase/ transferase, transferring
glycosyl groups | chr4:10312846-10316719 REVERSE
Length = 985
Score = 95.9 bits (237), Expect = 5e-21, Method: Composition-based stats.
Identities = 40/70 (57%), Positives = 54/70 (77%)
Query: 2 EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
E + + ++ + EK FG S VF+ STL+E+GG +P++L+KEAIHVISCGYE+KTE
Sbjct: 609 EYDRSMLISQTSFEKTFGLSTVFIESTLMENGGVPDSVNPSTLIKEAIHVISCGYEEKTE 668
Query: 62 WGKEVGWIYG 71
WGKE+GWIYG
Sbjct: 669 WGKEIGWIYG 678
>AT1G02730.1 | Symbols: ATCSLD5, CSLD5 | ATCSLD5; 1,4-beta-D-xylan
synthase/ cellulose synthase | chr1:594697-598473
REVERSE
Length = 1181
Score = 60.1 bits (144), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/79 (48%), Positives = 42/79 (53%), Gaps = 21/79 (26%)
Query: 14 LEKKFGQSPVFVAST--------LLED-GGSLKGASPASLLK------------EAIHVI 52
L K+FG S FVAS L++D G K + PA L EAI VI
Sbjct: 801 LPKRFGNSNSFVASIPVAEYQGRLIQDLQGKGKNSRPAGSLAVPREPLDAATVAEAISVI 860
Query: 53 SCGYEDKTEWGKEVGWIYG 71
SC YEDKTEWGK VGWIYG
Sbjct: 861 SCFYEDKTEWGKRVGWIYG 879
>AT5G16910.1 | Symbols: ATCSLD2, CSLD2 | CSLD2 (CELLULOSE-SYNTHASE
LIKE D2); cellulose synthase/ transferase, transferring
glycosyl groups | chr5:5561679-5565290 FORWARD
Length = 1145
Score = 55.8 bits (133), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 25/90 (27%)
Query: 2 EDENAAVMPENKLEKKFGQSPVFVASTL--------LEDGGSLKGASP------------ 41
E+ N +++P KKFG S + S L D ++K P
Sbjct: 759 EEMNLSLVP-----KKFGNSTFLIDSIPVAEFQGRPLADHPAVKNGRPPGALTIPRELLD 813
Query: 42 ASLLKEAIHVISCGYEDKTEWGKEVGWIYG 71
AS + EAI VISC YEDKTEWG +GWIYG
Sbjct: 814 ASTVAEAIAVISCWYEDKTEWGSRIGWIYG 843
>AT3G03050.1 | Symbols: CSLD3, KJK, ATCSLD3 | CSLD3 (CELLULOSE
SYNTHASE-LIKE D3); cellulose synthase/ transferase,
transferring glycosyl groups | chr3:687873-691629
FORWARD
Length = 1145
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 25/90 (27%)
Query: 2 EDENAAVMPENKLEKKFGQSPVFVASTL--------LEDGGSLKGASP------------ 41
E+ N +++P KKFG S + S L D +++ P
Sbjct: 759 EEMNLSLVP-----KKFGNSTFLIDSIPVAEFQGRPLADHPAVQNGRPPGALTIPRELLD 813
Query: 42 ASLLKEAIHVISCGYEDKTEWGKEVGWIYG 71
AS + EAI VISC YEDKTEWG +GWIYG
Sbjct: 814 ASTVAEAIAVISCWYEDKTEWGSRIGWIYG 843
>AT2G33100.1 | Symbols: ATCSLD1, CSLD1 | ATCSLD1; cellulose
synthase/ transferase, transferring glycosyl groups |
chr2:14036494-14040044 REVERSE
Length = 1036
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 41/82 (50%), Gaps = 20/82 (24%)
Query: 10 PENKLEKKFGQSPVFVASTL--------LEDGGSLK-GASPASLL-----------KEAI 49
P+ L KKFG S +F + L D S+K G P +LL EAI
Sbjct: 655 PDLGLPKKFGNSTMFTDTIPVAEYQGRPLADHMSVKNGRPPGALLLPRPPLDAPTVAEAI 714
Query: 50 HVISCGYEDKTEWGKEVGWIYG 71
VISC YED TEWG +GWIYG
Sbjct: 715 AVISCWYEDNTEWGDRIGWIYG 736
>AT1G32180.1 | Symbols: ATCSLD6, CSLD6 | ATCSLD6; cellulose
synthase/ transferase, transferring glycosyl groups |
chr1:11586516-11589651 REVERSE
Length = 979
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 20/78 (25%)
Query: 14 LEKKFGQSPVFV-----------------ASTLLEDGGSLKGASPA---SLLKEAIHVIS 53
+ K+FG S + V +S L GSL G+ + + EA++VIS
Sbjct: 601 IRKQFGSSSMLVNSVKVAEFEGRPLATVHSSRLGRPPGSLTGSRKPLDFATVNEAVNVIS 660
Query: 54 CGYEDKTEWGKEVGWIYG 71
C YEDKTEWG VGWIYG
Sbjct: 661 CWYEDKTEWGFNVGWIYG 678
>AT4G38190.1 | Symbols: ATCSLD4, CSLD4 | ATCSLD4; cellulose
synthase/ transferase, transferring glycosyl groups |
chr4:17910096-17913641 REVERSE
Length = 1111
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 20/79 (25%)
Query: 13 KLEKKFGQSPVFVASTL--------LEDGGSLKGASP------------ASLLKEAIHVI 52
+L K+FG S + S L D ++K P A+ + E++ VI
Sbjct: 726 QLPKRFGNSTLLAESIPIAEFQGRPLADHPAVKYGRPPGALRVPRDPLDATTVAESVSVI 785
Query: 53 SCGYEDKTEWGKEVGWIYG 71
SC YEDKTEWG VGWIYG
Sbjct: 786 SCWYEDKTEWGDRVGWIYG 804