Jatropha Genome Database

JcCB0954251.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0954251.10 - phase: 2 /partial
         (57 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G24170.3 | Symbols: ATGR1 | ATGR1 (glutathione-disulfide redu...    59   8e-10
AT3G24170.2 | Symbols: ATGR1 | ATGR1 (glutathione-disulfide redu...    59   8e-10
AT3G24170.1 | Symbols: ATGR1 | ATGR1 (glutathione-disulfide redu...    59   8e-10

>AT3G24170.3 | Symbols: ATGR1 | ATGR1 (glutathione-disulfide
           reductase); FAD binding / NADP or NADPH binding /
           glutathione-disulfide reductase/ oxidoreductase |
           chr3:8729762-8734115 REVERSE
          Length = 499

 Score = 58.5 bits (140), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/33 (72%), Positives = 30/33 (90%)

Query: 1   RQEKTVMKLVVDAATDKVLGASMCGPDAPEVIQ 33
           RQEKT+MKL+VD  +DKV+GASMCGPDA E++Q
Sbjct: 418 RQEKTLMKLIVDEKSDKVIGASMCGPDAAEIMQ 450


>AT3G24170.2 | Symbols: ATGR1 | ATGR1 (glutathione-disulfide
           reductase); FAD binding / NADP or NADPH binding /
           glutathione-disulfide reductase/ oxidoreductase |
           chr3:8729762-8734115 REVERSE
          Length = 499

 Score = 58.5 bits (140), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/33 (72%), Positives = 30/33 (90%)

Query: 1   RQEKTVMKLVVDAATDKVLGASMCGPDAPEVIQ 33
           RQEKT+MKL+VD  +DKV+GASMCGPDA E++Q
Sbjct: 418 RQEKTLMKLIVDEKSDKVIGASMCGPDAAEIMQ 450


>AT3G24170.1 | Symbols: ATGR1 | ATGR1 (glutathione-disulfide
           reductase); FAD binding / NADP or NADPH binding /
           glutathione-disulfide reductase/ oxidoreductase |
           chr3:8729762-8734115 REVERSE
          Length = 499

 Score = 58.5 bits (140), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/33 (72%), Positives = 30/33 (90%)

Query: 1   RQEKTVMKLVVDAATDKVLGASMCGPDAPEVIQ 33
           RQEKT+MKL+VD  +DKV+GASMCGPDA E++Q
Sbjct: 418 RQEKTLMKLIVDEKSDKVIGASMCGPDAAEIMQ 450