Jatropha Genome Database

JcCB0914631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0914631.10 + phase: 0 /partial
         (53 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54080.2 | Symbols: HGO | HGO (HOMOGENTISATE 1,2-DIOXYGENASE)...    87   2e-18
AT5G54080.1 | Symbols: HGO | HGO (HOMOGENTISATE 1,2-DIOXYGENASE)...    87   2e-18

>AT5G54080.2 | Symbols: HGO | HGO (HOMOGENTISATE 1,2-DIOXYGENASE);
           homogentisate 1,2-dioxygenase | chr5:21945920-21948070
           FORWARD
          Length = 461

 Score = 87.0 bits (214), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/52 (71%), Positives = 42/52 (80%)

Query: 2   QATIARGNDAGPYKITDTMAFMFESCLIPRICSWAVESPLLDADYYQCWLGL 53
           +ATIAR N   P K+T TMAFMFES LIPR+C WA+ESP LD DYYQCW+GL
Sbjct: 385 EATIARVNAMAPSKLTGTMAFMFESALIPRVCHWALESPFLDHDYYQCWIGL 436


>AT5G54080.1 | Symbols: HGO | HGO (HOMOGENTISATE 1,2-DIOXYGENASE);
           homogentisate 1,2-dioxygenase | chr5:21945920-21948070
           FORWARD
          Length = 461

 Score = 87.0 bits (214), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/52 (71%), Positives = 42/52 (80%)

Query: 2   QATIARGNDAGPYKITDTMAFMFESCLIPRICSWAVESPLLDADYYQCWLGL 53
           +ATIAR N   P K+T TMAFMFES LIPR+C WA+ESP LD DYYQCW+GL
Sbjct: 385 EATIARVNAMAPSKLTGTMAFMFESALIPRVCHWALESPFLDHDYYQCWIGL 436