Jatropha Genome Database

JcCB0902911.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0902911.10 - phase: 1 /partial
         (100 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G18440.1 | Symbols:  | adenylosuccinate lyase, putative / ade...   144   8e-36
AT1G36280.1 | Symbols:  | adenylosuccinate lyase, putative / ade...   139   3e-34

>AT4G18440.1 | Symbols:  | adenylosuccinate lyase, putative /
           adenylosuccinase, putative | chr4:10186385-10188832
           REVERSE
          Length = 536

 Score =  144 bits (364), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 70/97 (72%), Positives = 82/97 (84%), Gaps = 10/97 (10%)

Query: 2   QVKWLLKLSQIAEVIEVPNFSEEAQSFLQGLIDGFSLDDALEVKNIEKVTNHDVKAVEYF 61
           ++KWLLKLS I EV EVP+FS+EAQSFLQG+IDGFS+DDALE+K IE+VTNHDVKAVEYF
Sbjct: 113 EIKWLLKLSNIPEVTEVPSFSKEAQSFLQGIIDGFSIDDALEIKKIERVTNHDVKAVEYF 172

Query: 62  LKKKCQSHPEIAK----------SEDINNLAHALMLK 88
           LK+KC+S PEIAK          SEDINNL+HALML+
Sbjct: 173 LKQKCESQPEIAKVLEFFHFACTSEDINNLSHALMLQ 209


>AT1G36280.1 | Symbols:  | adenylosuccinate lyase, putative /
           adenylosuccinase, putative | chr1:13640600-13642908
           FORWARD
          Length = 527

 Score =  139 bits (351), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 66/97 (68%), Positives = 81/97 (83%), Gaps = 10/97 (10%)

Query: 2   QVKWLLKLSQIAEVIEVPNFSEEAQSFLQGLIDGFSLDDALEVKNIEKVTNHDVKAVEYF 61
           ++KWL+KLS I +V EVP+FS+EA  +LQG+IDGFS+DDAL+VK IE+VTNHDVKAVEYF
Sbjct: 104 EIKWLIKLSNIPQVTEVPSFSKEAHKYLQGIIDGFSMDDALQVKKIERVTNHDVKAVEYF 163

Query: 62  LKKKCQSHPEIAK----------SEDINNLAHALMLK 88
           LK+KC+SHPEIAK          SEDINNL+HALML+
Sbjct: 164 LKQKCESHPEIAKVLEFFHFACTSEDINNLSHALMLQ 200