Jatropha Genome Database
- JcCB0902031.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0902031.10 + phase: 0 /partial
(223 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | SAUL1 (SENESCENCE... 282 1e-76
AT1G76390.2 | Symbols: | armadillo/beta-catenin repeat family p... 276 5e-75
AT1G76390.1 | Symbols: | armadillo/beta-catenin repeat family p... 276 5e-75
AT1G68940.2 | Symbols: | armadillo/beta-catenin repeat protein-... 142 1e-34
AT1G68940.3 | Symbols: | armadillo/beta-catenin repeat protein-... 142 1e-34
AT1G68940.1 | Symbols: | armadillo/beta-catenin repeat protein-... 142 2e-34
AT5G42340.1 | Symbols: | binding / ubiquitin-protein ligase | c... 97 7e-21
AT3G46510.1 | Symbols: PUB13, ATPUB13 | PUB13 (PLANT U-BOX 13); ... 92 3e-19
AT1G23030.1 | Symbols: | armadillo/beta-catenin repeat family p... 83 1e-16
AT1G71020.1 | Symbols: | armadillo/beta-catenin repeat family p... 77 6e-15
AT1G71020.2 | Symbols: | armadillo/beta-catenin repeat family p... 77 8e-15
AT2G35930.1 | Symbols: PUB23 | PUB23 (PLANT U-BOX 23); ubiquitin... 76 1e-14
AT4G36550.1 | Symbols: | binding / ubiquitin-protein ligase | c... 76 2e-14
AT3G54850.1 | Symbols: ATPUB14, PUB14 | PUB14; ubiquitin-protein... 75 4e-14
AT1G10560.1 | Symbols: PUB18, ATPUB18 | PUB18 (PLANT U-BOX 18); ... 72 2e-13
AT2G28830.1 | Symbols: | binding / structural constituent of ri... 71 4e-13
AT3G52450.1 | Symbols: PUB22 | PUB22 (PLANT U-BOX 22); ubiquitin... 71 5e-13
AT1G60190.1 | Symbols: | armadillo/beta-catenin repeat family p... 71 6e-13
AT1G29340.1 | Symbols: PUB17, ATPUB17 | PUB17 (PLANT U-BOX 17); ... 70 1e-12
AT3G07360.1 | Symbols: PUB9, ATPUB9 | PUB9 (PLANT U-BOX 9); ubiq... 69 3e-12
AT3G49810.1 | Symbols: | U-box domain-containing protein | chr3... 69 3e-12
AT1G27910.1 | Symbols: PUB45, ATPUB45 | PUB45 (PLANT U-BOX 45); ... 69 3e-12
AT5G01830.1 | Symbols: | armadillo/beta-catenin repeat family p... 68 5e-12
AT3G19380.1 | Symbols: PUB25 | PUB25 (PLANT U-BOX 25); binding /... 65 2e-11
AT1G24330.1 | Symbols: | armadillo/beta-catenin repeat family p... 65 3e-11
AT1G67530.2 | Symbols: | armadillo/beta-catenin repeat family p... 65 4e-11
AT1G67530.1 | Symbols: | armadillo/beta-catenin repeat family p... 65 4e-11
AT3G61390.2 | Symbols: | U-box domain-containing protein | chr3... 64 5e-11
AT5G65920.1 | Symbols: | U-box domain-containing protein | chr5... 64 6e-11
AT3G11840.1 | Symbols: PUB24 | PUB24 (PLANT U-BOX 24); binding /... 64 6e-11
AT2G45920.1 | Symbols: | U-box domain-containing protein | chr2... 64 9e-11
AT1G01660.1 | Symbols: | U-box domain-containing protein | chr1... 62 2e-10
AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | U-box domain-containing ... 62 4e-10
AT3G18710.1 | Symbols: PUB29, ATPUB29 | PUB29 (PLANT U-BOX 29); ... 61 4e-10
AT5G57035.1 | Symbols: | ATP binding / kinase/ protein kinase/ ... 61 6e-10
AT5G09800.1 | Symbols: | U-box domain-containing protein | chr5... 61 7e-10
AT1G49780.1 | Symbols: PUB26 | PUB26 (PLANT U-BOX 26); binding /... 60 9e-10
AT2G45910.1 | Symbols: | protein kinase family protein / U-box ... 60 9e-10
AT3G54790.1 | Symbols: | armadillo/beta-catenin repeat family p... 59 2e-09
AT3G54790.2 | Symbols: | armadillo/beta-catenin repeat family p... 59 2e-09
AT2G23140.1 | Symbols: | binding / ubiquitin-protein ligase | c... 58 4e-09
AT4G21350.1 | Symbols: B80, PUB8 | PUB8 (PLANT U-BOX 8); binding... 58 4e-09
AT5G51270.1 | Symbols: | protein kinase family protein | chr5:2... 57 7e-09
AT5G67340.1 | Symbols: | armadillo/beta-catenin repeat family p... 57 9e-09
AT4G25160.1 | Symbols: | protein kinase family protein | chr4:1... 57 1e-08
AT1G01680.1 | Symbols: | U-box domain-containing protein | chr1... 55 3e-08
AT5G37490.1 | Symbols: | U-box domain-containing protein | chr5... 55 4e-08
AT1G56040.1 | Symbols: | binding / protein binding / ubiquitin-... 55 5e-08
AT5G65500.1 | Symbols: | ATP binding / kinase/ protein kinase/ ... 54 6e-08
AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | U-box domain-containing ... 54 6e-08
AT1G01670.1 | Symbols: | U-box domain-containing protein | chr1... 53 2e-07
AT3G49060.1 | Symbols: | protein kinase family protein / U-box ... 53 2e-07
AT5G61550.1 | Symbols: | protein kinase family protein | chr5:2... 52 2e-07
AT5G18340.1 | Symbols: | U-box domain-containing protein | chr5... 51 6e-07
AT5G61560.1 | Symbols: | protein kinase family protein | chr5:2... 51 7e-07
AT2G19410.1 | Symbols: | protein kinase family protein | chr2:8... 49 3e-06
AT5G18330.1 | Symbols: | U-box domain-containing protein | chr5... 48 4e-06
>AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | SAUL1
(SENESCENCE-ASSOCIATED E3 UBIQUITIN LIGASE 1);
ubiquitin-protein ligase | chr1:7217812-7220609 FORWARD
Length = 801
Score = 282 bits (721), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 136/204 (66%), Positives = 171/204 (83%), Gaps = 1/204 (0%)
Query: 20 QFERQYIEPIYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQ 79
FER ++ IY+ F+CPLTK+VM DPVTLENG+TFEREAIEKWF ECRDSG+ +CPLT
Sbjct: 15 HFERG-VDHIYEAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTS 73
Query: 80 KELKSTELNPSIALRNTIEEWTARNEAVQLDMARRSLNLTNPESDVLQSLKYVQYICQKS 139
+EL ST+++ SIALRNTIEEW +RN+A +LD+AR+SL L N E+D+LQ+L +V+ IC+
Sbjct: 74 QELTSTDVSASIALRNTIEEWRSRNDAAKLDIARQSLFLGNAETDILQALMHVRQICRTI 133
Query: 140 RSNKHVVRNAELIPMIVDMLKSSSRRVRCKALETLKTVIEEDVDNKAILAEGDTVRTIVK 199
RSN+H VRN++LI MI+DMLKS+S RVR KAL+TL+ V+E D ++KAI+AEGDTVRT+VK
Sbjct: 134 RSNRHGVRNSQLIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKAIVAEGDTVRTLVK 193
Query: 200 LLSHEQSKEREEAVSLLHELSKSE 223
LSHE SK RE AVSLL ELSKSE
Sbjct: 194 FLSHEPSKGREAAVSLLFELSKSE 217
>AT1G76390.2 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr1:28655914-28658531 FORWARD
Length = 811
Score = 276 bits (707), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 139/219 (63%), Positives = 174/219 (79%), Gaps = 6/219 (2%)
Query: 5 WDSSYDPGSQSEDSYQFERQYIEPIYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFN 64
WD GSQS++S QFE I+ IY+ F+CPLTKQVM +PVTLENGQTFEREAIEKWF
Sbjct: 7 WD-----GSQSDNSSQFE-PGIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQ 60
Query: 65 ECRDSGKKLTCPLTQKELKSTELNPSIALRNTIEEWTARNEAVQLDMARRSLNLTNPESD 124
ECR++G+ L+CP+T KEL T+L+PSIALRNTIEEW ARN+A++LD+AR+SL L N E++
Sbjct: 61 ECRENGQPLSCPITSKELSITDLSPSIALRNTIEEWRARNDALKLDIARQSLYLGNAETN 120
Query: 125 VLQSLKYVQYICQKSRSNKHVVRNAELIPMIVDMLKSSSRRVRCKALETLKTVIEEDVDN 184
+L +LK V+ IC+ R + V N +L+ +I DMLKSSS VRCKAL+TL+ V+E D ++
Sbjct: 121 ILLALKNVREICRNIRKIRQRVCNPQLVRLITDMLKSSSHEVRCKALQTLQVVVEGDEES 180
Query: 185 KAILAEGDTVRTIVKLLSHEQSKEREEAVSLLHELSKSE 223
KAI+AEGDTVRTIVK LS E SK RE AVS+L ELSKSE
Sbjct: 181 KAIVAEGDTVRTIVKFLSQEPSKGREAAVSVLFELSKSE 219
>AT1G76390.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr1:28655914-28658531 FORWARD
Length = 811
Score = 276 bits (707), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 139/219 (63%), Positives = 174/219 (79%), Gaps = 6/219 (2%)
Query: 5 WDSSYDPGSQSEDSYQFERQYIEPIYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFN 64
WD GSQS++S QFE I+ IY+ F+CPLTKQVM +PVTLENGQTFEREAIEKWF
Sbjct: 7 WD-----GSQSDNSSQFE-PGIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQ 60
Query: 65 ECRDSGKKLTCPLTQKELKSTELNPSIALRNTIEEWTARNEAVQLDMARRSLNLTNPESD 124
ECR++G+ L+CP+T KEL T+L+PSIALRNTIEEW ARN+A++LD+AR+SL L N E++
Sbjct: 61 ECRENGQPLSCPITSKELSITDLSPSIALRNTIEEWRARNDALKLDIARQSLYLGNAETN 120
Query: 125 VLQSLKYVQYICQKSRSNKHVVRNAELIPMIVDMLKSSSRRVRCKALETLKTVIEEDVDN 184
+L +LK V+ IC+ R + V N +L+ +I DMLKSSS VRCKAL+TL+ V+E D ++
Sbjct: 121 ILLALKNVREICRNIRKIRQRVCNPQLVRLITDMLKSSSHEVRCKALQTLQVVVEGDEES 180
Query: 185 KAILAEGDTVRTIVKLLSHEQSKEREEAVSLLHELSKSE 223
KAI+AEGDTVRTIVK LS E SK RE AVS+L ELSKSE
Sbjct: 181 KAIVAEGDTVRTIVKFLSQEPSKGREAAVSVLFELSKSE 219
>AT1G68940.2 | Symbols: | armadillo/beta-catenin repeat
protein-related / U-box domain-containing protein |
chr1:25921453-25925374 REVERSE
Length = 1035
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 127/201 (63%), Gaps = 3/201 (1%)
Query: 24 QYIEPIYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELK 83
Q++EP Y F+CPLTK++M DPVT E G T ER+A+ +WF+ +S ++ CP+T ++L
Sbjct: 241 QFMEPPYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNS-DEINCPVTGQKL- 298
Query: 84 STELNPSIALRNTIEEWTARNEAVQLDMARRSLNLTNPESDVLQSLKYVQYICQKSRSNK 143
+TEL+ ++ L+ I+EW RNEA ++ +A +L+L ES V+ +L+ +Q C+ NK
Sbjct: 299 TTELSANVVLKTIIQEWKVRNEAARIKVAHAALSLGGSESMVIDALRDLQMTCEGKEYNK 358
Query: 144 HVVRNAELIPMIVDMLKSSSRRVRCKALETLKTVIEEDVDN-KAILAEGDTVRTIVKLLS 202
VR A +I ++ L S+ VR + L+ L+T+ +E+ D+ K ++ + T+ ++KLL
Sbjct: 359 VQVREAGIIQLLDRYLTYRSKDVRFELLKFLRTLADEETDDGKEMIVKTITMSCVIKLLG 418
Query: 203 HEQSKEREEAVSLLHELSKSE 223
R A +LL ELSKS+
Sbjct: 419 SSHQPVRHAAQALLLELSKSQ 439
>AT1G68940.3 | Symbols: | armadillo/beta-catenin repeat
protein-related / U-box domain-containing protein |
chr1:25921453-25925374 REVERSE
Length = 1090
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 127/201 (63%), Gaps = 3/201 (1%)
Query: 24 QYIEPIYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELK 83
Q++EP Y F+CPLTK++M DPVT E G T ER+A+ +WF+ +S ++ CP+T ++L
Sbjct: 241 QFMEPPYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNS-DEINCPVTGQKL- 298
Query: 84 STELNPSIALRNTIEEWTARNEAVQLDMARRSLNLTNPESDVLQSLKYVQYICQKSRSNK 143
+TEL+ ++ L+ I+EW RNEA ++ +A +L+L ES V+ +L+ +Q C+ NK
Sbjct: 299 TTELSANVVLKTIIQEWKVRNEAARIKVAHAALSLGGSESMVIDALRDLQMTCEGKEYNK 358
Query: 144 HVVRNAELIPMIVDMLKSSSRRVRCKALETLKTVIEEDVDN-KAILAEGDTVRTIVKLLS 202
VR A +I ++ L S+ VR + L+ L+T+ +E+ D+ K ++ + T+ ++KLL
Sbjct: 359 VQVREAGIIQLLDRYLTYRSKDVRFELLKFLRTLADEETDDGKEMIVKTITMSCVIKLLG 418
Query: 203 HEQSKEREEAVSLLHELSKSE 223
R A +LL ELSKS+
Sbjct: 419 SSHQPVRHAAQALLLELSKSQ 439
>AT1G68940.1 | Symbols: | armadillo/beta-catenin repeat
protein-related / U-box domain-containing protein |
chr1:25922001-25925374 REVERSE
Length = 1033
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 127/201 (63%), Gaps = 3/201 (1%)
Query: 24 QYIEPIYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELK 83
Q++EP Y F+CPLTK++M DPVT E G T ER+A+ +WF+ +S ++ CP+T ++L
Sbjct: 241 QFMEPPYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNS-DEINCPVTGQKL- 298
Query: 84 STELNPSIALRNTIEEWTARNEAVQLDMARRSLNLTNPESDVLQSLKYVQYICQKSRSNK 143
+TEL+ ++ L+ I+EW RNEA ++ +A +L+L ES V+ +L+ +Q C+ NK
Sbjct: 299 TTELSANVVLKTIIQEWKVRNEAARIKVAHAALSLGGSESMVIDALRDLQMTCEGKEYNK 358
Query: 144 HVVRNAELIPMIVDMLKSSSRRVRCKALETLKTVIEEDVDN-KAILAEGDTVRTIVKLLS 202
VR A +I ++ L S+ VR + L+ L+T+ +E+ D+ K ++ + T+ ++KLL
Sbjct: 359 VQVREAGIIQLLDRYLTYRSKDVRFELLKFLRTLADEETDDGKEMIVKTITMSCVIKLLG 418
Query: 203 HEQSKEREEAVSLLHELSKSE 223
R A +LL ELSKS+
Sbjct: 419 SSHQPVRHAAQALLLELSKSQ 439
>AT5G42340.1 | Symbols: | binding / ubiquitin-protein ligase |
chr5:16928086-16930367 REVERSE
Length = 660
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 113/203 (55%), Gaps = 21/203 (10%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F+CP+T ++M DPV + GQT+E+E+I+KWF D+G K TCP T++EL L P+ A
Sbjct: 294 FLCPITLEIMLDPVIIATGQTYEKESIQKWF----DAGHK-TCPKTRQELDHLSLAPNFA 348
Query: 93 LRNTIEEWTARN--EAVQLDMARRSLNLTNPESDVL-------------QSLKYVQYICQ 137
L+N I +W +N + + +++ S N E +L +S+K ++ + +
Sbjct: 349 LKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLAR 408
Query: 138 KSRSNKHVVRNAELIPMIVDMLKSSSRRVRCKALETLKTVIEEDVDNKAILAEGDTVRTI 197
++ N+ ++ NA IP++V +L ++ A+ TL + ++V+ K I EG + I
Sbjct: 409 ENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEG-AIPNI 467
Query: 198 VKLLSHEQSKEREEAVSLLHELS 220
+++L + + RE + + L LS
Sbjct: 468 IEILENGNREARENSAAALFSLS 490
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | PUB13 (PLANT U-BOX 13);
ubiquitin-protein ligase | chr3:17124106-17126539
REVERSE
Length = 660
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 32/221 (14%)
Query: 24 QYIEPIYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELK 83
Q I I D F CP++ ++MRDPV + +GQT+ER IEKW G TCP TQ+ L
Sbjct: 251 QKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIE-----GGHSTCPKTQQALT 305
Query: 84 STELNPSIALRNTIEEWTARN-----------------------EAVQLDMARRSLNLTN 120
ST L P+ LR+ I +W N EA +++ L N
Sbjct: 306 STTLTPNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGN 365
Query: 121 PESDVLQSLKYVQYICQKSRSNKHVVRNAELIPMIVDMLKSSSRRVRCKALETLKTV-IE 179
PE D + ++ + +++ N+ + A IP++V +L + R++ ++ L + I
Sbjct: 366 PE-DQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSIC 424
Query: 180 EDVDNKAILAEGDTVRTIVKLLSHEQSKEREEAVSLLHELS 220
E +NK + + IV++L + RE A + L LS
Sbjct: 425 E--NNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLS 463
>AT1G23030.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr1:8156745-8158842 FORWARD
Length = 612
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 95/188 (50%), Gaps = 31/188 (16%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F+CP++ ++M+DPV + GQT+ER I++W D G LTCP TQ++L++ L P+
Sbjct: 245 FLCPVSLELMKDPVIVATGQTYERAYIQRWI----DCG-NLTCPKTQQKLENFTLTPNYV 299
Query: 93 LRNTIEEWTARNEAVQLDMARRSLNLTNPESDVLQSLKYVQYICQKSRSNKHVVRNAELI 152
LR+ I W A + N+ P YI +++++ + +I
Sbjct: 300 LRSLISRWCAEH------------NIEQPAG----------YINGRTKNSGDM----SVI 333
Query: 153 PMIVDMLKSSSRRVRCKALETLKTVIEEDVDNKAILAEGDTVRTIVKLLSHEQSKEREEA 212
+V L S S R A+ ++++ + DN+ ++AE + +V LL+ E +E A
Sbjct: 334 RALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENA 393
Query: 213 VSLLHELS 220
++ + LS
Sbjct: 394 ITCVLNLS 401
>AT1G71020.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr1:26790825-26793105 REVERSE
Length = 628
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 32/197 (16%)
Query: 29 IYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELN 88
I + F+CP++ ++M+DP + GQT+ER I++W D G L+CP TQ++L++ L
Sbjct: 243 IPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWI----DCG-NLSCPKTQQKLENFTLT 297
Query: 89 PSIALRNTIEEWTARNEAVQLDMARRSLNLTNPESDVLQSLKYVQYICQKSRSNKHVVR- 147
P+ LR+ I +W ++ N+ P Y+ +++++ R
Sbjct: 298 PNYVLRSLISQWCTKH------------NIEQPGG----------YMNGRTKNSDGSFRD 335
Query: 148 ---NAELIPMIVDMLKSSSRRVRCKALETLKTVIEEDVDNKAILAEGDTVRTIVKLLSHE 204
+ I +V L S S R A+ ++++ + DN+ ++AE + +VKLL+ +
Sbjct: 336 LSGDMSAIRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSD 395
Query: 205 QSKE-REEAVSLLHELS 220
E +E AV+ + LS
Sbjct: 396 GDTETQENAVTCILNLS 412
>AT1G71020.2 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr1:26790825-26792357 REVERSE
Length = 480
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 32/197 (16%)
Query: 29 IYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELN 88
I + F+CP++ ++M+DP + GQT+ER I++W D G L+CP TQ++L++ L
Sbjct: 95 IPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWI----DCG-NLSCPKTQQKLENFTLT 149
Query: 89 PSIALRNTIEEWTARNEAVQLDMARRSLNLTNPESDVLQSLKYVQYICQKSRSNKHVVR- 147
P+ LR+ I +W ++ N+ P Y+ +++++ R
Sbjct: 150 PNYVLRSLISQWCTKH------------NIEQPGG----------YMNGRTKNSDGSFRD 187
Query: 148 ---NAELIPMIVDMLKSSSRRVRCKALETLKTVIEEDVDNKAILAEGDTVRTIVKLLSHE 204
+ I +V L S S R A+ ++++ + DN+ ++AE + +VKLL+ +
Sbjct: 188 LSGDMSAIRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSD 247
Query: 205 QSKE-REEAVSLLHELS 220
E +E AV+ + LS
Sbjct: 248 GDTETQENAVTCILNLS 264
>AT2G35930.1 | Symbols: PUB23 | PUB23 (PLANT U-BOX 23);
ubiquitin-protein ligase | chr2:15083101-15084336
REVERSE
Length = 411
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 35/193 (18%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F+CP++ ++M+DPV + G T++R++IEKW +GKK +CP+T++++ +L P+
Sbjct: 16 FLCPISLEIMKDPVIVSTGITYDRDSIEKWLF----AGKKNSCPVTKQDITDADLTPNHT 71
Query: 93 LRNTIEEWTARNEAVQLDMARRSLNLTNPESDVLQSLKYVQYICQKSRSNKHVVRNAELI 152
LR I+ W N + ++ + P + +S E+
Sbjct: 72 LRRLIQSWCTLNASYGVE------RIPTPRPPICKS---------------------EIE 104
Query: 153 PMIVDMLKSSSRRVRCKALETLKTVIEEDVDNKAILAEGDTVRTIVKLLSH--EQSKERE 210
+I D S +V+C L+ L+ ++ E+ NK L + ++S+ E +
Sbjct: 105 KLIRDSASSHENQVKC--LKRLRQIVSENATNKRCLEAAGVPEFLANIVSNDSENGSLTD 162
Query: 211 EAVSLLHELSKSE 223
EA++LL+ L SE
Sbjct: 163 EALNLLYHLETSE 175
>AT4G36550.1 | Symbols: | binding / ubiquitin-protein ligase |
chr4:17245400-17247926 REVERSE
Length = 718
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F C L++ VM DPV + +G TFER I+KWF+E DS CP+++++L L P++
Sbjct: 223 FKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDS-----CPISKRKLDDFTLKPNVE 277
Query: 93 LRNTIEEWTARNEAVQLDMARRSLNLTN 120
L++ I EW A+N D AR+ + +N
Sbjct: 278 LKSQISEWCAKNGLDVQDPARKHVKASN 305
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | PUB14; ubiquitin-protein
ligase | chr3:20321524-20323848 FORWARD
Length = 632
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 34/238 (14%)
Query: 8 SYDPGSQSEDSYQFERQYIEPIYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECR 67
S DP S S R I + F CP++ ++M+DPV + GQT+ER +I+KW
Sbjct: 228 SSDP-DPSTGSRIVSRHRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWL---- 282
Query: 68 DSGKKLTCPLTQKELKSTELNPSIALRNTIEEWTARNEAVQLDMARRSLNLT----NPES 123
D+G K TCP +Q+ L L P+ L++ I W N ++L + S T + S
Sbjct: 283 DAGHK-TCPKSQETLLHAGLTPNYVLKSLIALWCESN-GIELPQNQGSCRTTKIGGSSSS 340
Query: 124 D-----VLQSLKY---------------VQYICQKSRSNKHVVRNAELIPMIVDMLKSSS 163
D VL L+ ++ + +++ N+ + A IP++V++L S
Sbjct: 341 DCDRTFVLSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPD 400
Query: 164 RRVRCKALETLKTV-IEEDVDNKAILAEGDTVRTIVKLLSHEQSKEREEAVSLLHELS 220
R + ++ L + I E NK + + + IV++L + + RE A + L LS
Sbjct: 401 PRTQEHSVTALLNLSINE--GNKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLS 456
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | PUB18 (PLANT U-BOX 18);
ubiquitin-protein ligase | chr1:3484613-3486706 FORWARD
Length = 697
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 26/215 (12%)
Query: 10 DPGSQSEDSYQFERQYIEPI-YDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRD 68
D + ED + + I + + +CP++ ++M DPV +E G T++R +I KWF
Sbjct: 268 DHHNHHEDGIKKDHDLIRGLKVEDLLCPISLEIMTDPVVIETGHTYDRSSITKWFG---- 323
Query: 69 SGKKLTCPLTQKELKSTELNPSIALRNTIEEWTARNEAVQLDMARR--SLNLTNPESDVL 126
SG +TCP+T K L STEL ++++R I + N V ++RR S + PES L
Sbjct: 324 SG-NITCPITGKILTSTELVDNVSVRQVIRKHCKTNGIVLAGISRRRKSHDDVVPES--L 380
Query: 127 QSLKYVQYICQKSRSNKHVVRNAELIPMIVDMLKSSSRRVRCKALETLKTVIEEDVDNKA 186
+ + I + +ELI +M+ + R +R + + N++
Sbjct: 381 AAKGAGKLIAK--------FLTSELINGGEEMIYRAVREIRVQT--------KTSSFNRS 424
Query: 187 ILAEGDTVRTIVKLLSHEQSKEREEAVSLLHELSK 221
L + V ++KLLS + +E A++ + LSK
Sbjct: 425 CLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSK 459
>AT2G28830.1 | Symbols: | binding / structural constituent of
ribosome / ubiquitin-protein ligase |
chr2:12367001-12370608 REVERSE
Length = 962
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F CP++ ++M DPV + +GQT+ERE I+KW G LTCP TQ+ L S + P+
Sbjct: 260 FRCPISLELMTDPVIVSSGQTYERECIKKWLE-----GGHLTCPKTQETLTSDIMTPNYV 314
Query: 93 LRNTIEEWTARN--------------------------EAVQLDMARRSLNLTNPESDVL 126
LR+ I +W N E +++ L PE D
Sbjct: 315 LRSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPE-DRR 373
Query: 127 QSLKYVQYICQKSRSNKHVVRNAELIPMIVDMLKSS--SRRVRCKALETLKTVIEEDVDN 184
+ ++ + +++ N+ + + IP++V++L S SR L I ++
Sbjct: 374 SAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKG 433
Query: 185 KAILAEGDTVRTIVKLLSHEQSKEREEAVSLLHELS 220
K + + G V IV +L + RE A + L LS
Sbjct: 434 KIVYSSG-AVPGIVHVLQKGSMEARENAAATLFSLS 468
>AT3G52450.1 | Symbols: PUB22 | PUB22 (PLANT U-BOX 22);
ubiquitin-protein ligase | chr3:19440943-19442250
REVERSE
Length = 435
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F+CP++ +M+DPV + G T++RE+IEKW SGKK +CP+T++ + T+L P+
Sbjct: 11 FLCPISLDIMKDPVIVSTGITYDRESIEKWLF----SGKKNSCPVTKQVITETDLTPNHT 66
Query: 93 LRNTIEEWTARNEAVQLD 110
LR I+ W N + ++
Sbjct: 67 LRRLIQSWCTLNASYGIE 84
>AT1G60190.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr1:22198403-22200463 FORWARD
Length = 686
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 31 DTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPS 90
D CP++ ++M DPV LE+G T++R +I KWF + +TCP T K L ST L +
Sbjct: 280 DDLRCPISLEIMSDPVVLESGHTYDRSSITKWF-----ASGNITCPKTGKTLVSTVLVDN 334
Query: 91 IALRNTIEEWTARNEAVQLDMARRSLNLT----------------------NPESDVLQS 128
+++ I+ ++ +N V ++ +++ E +++++
Sbjct: 335 FSVKQVIQSYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEEMVKA 394
Query: 129 LKYVQYICQKSRSNKHVVRNAELIPMIVDMLKSSSRRVRCKALETLKTVIEEDVDNKAIL 188
L ++ + + S + + A ++ ++ +L+S R++ A+ + + ++ I+
Sbjct: 395 LVEIRILTKTSTFYRSCLVEAGVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIV 454
Query: 189 AE-GDTVRTIVKLLSHEQSKE-REEAVSLLHELS 220
E G +R IV++L+ +E R+ A + L LS
Sbjct: 455 GEDGGGLRLIVEVLNDGARRESRQYAAAALFYLS 488
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | PUB17 (PLANT U-BOX 17);
ubiquitin-protein ligase | chr1:10264412-10266601
FORWARD
Length = 729
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 88/191 (46%), Gaps = 20/191 (10%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
FVCP++ +M DPV + GQT++R +I +W E TCP T + L + + P+ A
Sbjct: 309 FVCPISLDLMTDPVIISTGQTYDRNSIARWIEE-----GHCTCPKTGQMLMDSRIVPNRA 363
Query: 93 LRNTIEEWTARNEAVQLDMARRSLNLTNPESDVLQSLKYVQYICQKSRSNKHVVRNAELI 152
L+N I +W + ++ S +P +L + V N +
Sbjct: 364 LKNLIVQWCTAS-----GISYESEFTDSPNESFASALP----------TKAAVEANKATV 408
Query: 153 PMIVDMLKSSSRRVRCKALETLKTVIEEDVDNKAILAEGDTVRTIVKLLSHEQSKEREEA 212
+++ L S+ + A ++ + + +N+A +AE + + +LL+ E + +E +
Sbjct: 409 SILIKYLADGSQAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQENS 468
Query: 213 VSLLHELSKSE 223
V+ + LS E
Sbjct: 469 VTAMLNLSIYE 479
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | PUB9 (PLANT U-BOX 9);
ubiquitin-protein ligase | chr3:2354884-2356613 FORWARD
Length = 460
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 9/112 (8%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F CPL+ ++MRDPV L +GQT+++ I+KW + SG + TCP TQ+ L T L P++
Sbjct: 78 FRCPLSNELMRDPVVLASGQTYDKLFIQKWLS----SGNR-TCPKTQQVLPHTALTPNLL 132
Query: 93 LRNTIEEWTARNEAVQLDMARRSLNLTNPESDVLQSLK--YVQYICQKSRSN 142
+R I +W +N ++ NL N + V +S + + +C+ S SN
Sbjct: 133 IREMISKWCKKNGLET--KSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSN 182
>AT3G49810.1 | Symbols: | U-box domain-containing protein |
chr3:18474936-18476282 REVERSE
Length = 448
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Query: 26 IEPIYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKST 85
++ I F+CP++ + M+DPVTL GQT+ER I KWFN LTCP T +EL
Sbjct: 61 LQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNL-----GHLTCPTTMQELWDD 115
Query: 86 ELNPSIALRNTIEEWTARNEAVQLDMARRSLNLTNPESDVLQSLK 130
+ P+ L + I W ++ + M +RS ++ ++L +LK
Sbjct: 116 TVTPNKTLHHLIYTWFSQKYVL---MKKRSEDVQGRAIEILGTLK 157
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | PUB45 (PLANT U-BOX 45);
ubiquitin-protein ligase | chr1:9720962-9723975 REVERSE
Length = 768
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 40/199 (20%)
Query: 35 CPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIALR 94
CP++ Q+M DPV + +GQT+ER IEKWF++ + TCP T ++L L P+ ++
Sbjct: 285 CPISLQLMYDPVIIASGQTYERICIEKWFSDGHN-----TCPKTHQQLSHLCLTPNYCVK 339
Query: 95 NTIEEWTARNEAVQ--------LDMARRSLNLTNPESDVLQSLKYV-------------- 132
I W +N VQ LD+ L L+ ES +S K V
Sbjct: 340 ALISSWCEQN-GVQVPDGPPESLDLNYWRLALSVSESTDTRSAKRVGSCKLKDVKVVPLE 398
Query: 133 ------QYICQKSRSNKHVV---RNAELIPMIVDMLKSSSRRVRCKALETLKTVIEEDVD 183
+ C+ V R EL+ + D+ + R +C+ +E ++ ++++D +
Sbjct: 399 ESGTIKEEACESEYQEDQVTLVERCTELLTTLTDV---DTLRKKCRVVEQIRVLLKDDEE 455
Query: 184 NKAILAEGDTVRTIVKLLS 202
+ ++ E V +++ L
Sbjct: 456 ARILMGENGCVEALLQFLG 474
>AT5G01830.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr5:320983-323007 FORWARD
Length = 674
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 9 YDPGSQSEDSYQFERQYIEPIYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRD 68
Y P + + D + + I F CP+T ++MRDPV + GQT++RE+I+ W +
Sbjct: 254 YGPSTPAPDFRRHQSLSDANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHN 313
Query: 69 SGKKLTCPLTQKELKSTELNPSIALRNTIEEW 100
TCP T + LK T L P+ AL+N I W
Sbjct: 314 -----TCPKTGQVLKHTSLVPNRALKNLIVLW 340
>AT3G19380.1 | Symbols: PUB25 | PUB25 (PLANT U-BOX 25); binding /
ubiquitin-protein ligase | chr3:6714602-6715867 REVERSE
Length = 421
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 29/193 (15%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F CP++ ++M+DPVT+ GQT++R +IE W + G TCP+T+ L L P+
Sbjct: 18 FRCPISLELMQDPVTVCTGQTYDRASIESWVS----IGNNTTCPVTRAPLSDFTLIPNHT 73
Query: 93 LRNTIEEWTARNEAVQLDMARRSLNLTNPESDVLQSLKYVQYICQKSRSNKHVVRNAELI 152
LR I+EW N + ++ +P S V L I + HV
Sbjct: 74 LRRLIQEWCVANRSNGVERIPTPKQPADPTS-VRALLSQASAI-----TGTHV------- 120
Query: 153 PMIVDMLKSSSRRVRCKALETLKTVIEEDVDNKAILAEGDTVRTIVKLLSHEQSKER--E 210
S R R AL L+ + N+ ++A + ++K+L E +
Sbjct: 121 ----------SVRSRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVS 170
Query: 211 EAVSLLHELSKSE 223
E+++LL L +E
Sbjct: 171 ESLALLVMLPITE 183
>AT1G24330.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing family protein |
chr1:8631779-8634835 FORWARD
Length = 771
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 35 CPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIALR 94
CP++ Q+M DPV + +GQT+ER IEKWF++ +S CP TQ++L L P+ ++
Sbjct: 281 CPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNS-----CPKTQQQLPHLSLTPNYCVK 335
Query: 95 NTIEEWTARN 104
I W +N
Sbjct: 336 GLIASWCEQN 345
>AT1G67530.2 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing family protein |
chr1:25308229-25311081 FORWARD
Length = 782
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 35 CPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIALR 94
CP++ Q+M DPV + +GQT+ER IEKWF++ + TCP TQ++L L P+ ++
Sbjct: 278 CPISLQLMCDPVIIASGQTYERVCIEKWFSDGHN-----TCPKTQQQLPHISLTPNNCVK 332
Query: 95 NTIEEWTARN 104
I W +N
Sbjct: 333 GLIASWCEQN 342
>AT1G67530.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing family protein |
chr1:25308229-25311081 FORWARD
Length = 782
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 35 CPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIALR 94
CP++ Q+M DPV + +GQT+ER IEKWF++ + TCP TQ++L L P+ ++
Sbjct: 278 CPISLQLMCDPVIIASGQTYERVCIEKWFSDGHN-----TCPKTQQQLPHISLTPNNCVK 332
Query: 95 NTIEEWTARN 104
I W +N
Sbjct: 333 GLIASWCEQN 342
>AT3G61390.2 | Symbols: | U-box domain-containing protein |
chr3:22716418-22718270 FORWARD
Length = 435
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F+CP+T +M DP +G T+E EAI +WF + T P+ K L T L P++A
Sbjct: 357 FICPITHDIMEDPHVAADGFTYEGEAISRWFERGHE-----TSPMINKRLPHTSLVPNLA 411
Query: 93 LRNTIEEW 100
LR+ I+EW
Sbjct: 412 LRSAIQEW 419
>AT5G65920.1 | Symbols: | U-box domain-containing protein |
chr5:26364323-26365657 REVERSE
Length = 444
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 29 IYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFN--ECRDSGKKLTCPLTQKELKSTE 86
I F+CP++ + M+DPVTL GQT+ER I KWFN C TCP T +EL
Sbjct: 60 IPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHC-------TCPTTMQELWDDL 112
Query: 87 LNPSIALRNTIEEWTARNEAVQLDMARRSLNLTNPESDVLQSLKYV-------------Q 133
+ P+ L I W ++ + M +RS ++ ++L +L+ Q
Sbjct: 113 VTPNKTLHQLIYTWFSQKYVL---MKKRSEDVQGRAIEILGTLRKAKGKAKVHALSELKQ 169
Query: 134 YICQKSRSNKHVVRNAELIPMIVDMLKSSSRRVRCKALETLKTVIEEDVDNKAILAEGDT 193
+ + + K VV + + + +S V +A+ L +E D D+KA L +
Sbjct: 170 VVMAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAIAILVN-LELDSDSKAGLMQPAR 228
Query: 194 VRTIVKLLS 202
V +V +L+
Sbjct: 229 VSLMVDMLN 237
>AT3G11840.1 | Symbols: PUB24 | PUB24 (PLANT U-BOX 24); binding /
ubiquitin-protein ligase | chr3:3736578-3738250 REVERSE
Length = 470
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 84/168 (50%), Gaps = 33/168 (19%)
Query: 19 YQFERQYIEP----------IYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRD 68
Y + + Y+ P I + F+CP++ ++M+DPVT +G T++R+ I KW
Sbjct: 4 YTYTKSYVFPQMDQEEEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLE---- 59
Query: 69 SGKKLTCPLTQKELK-STELNPSIALRNTIEEWTARNEAVQLDMARRSLNLTNP-----E 122
K +CP+T++ L ++L P+ LR I+ W NE R + ++ P +
Sbjct: 60 --KVPSCPVTKQPLPLDSDLTPNHMLRRLIQHWCVENE------TRGVVRISTPRVPPGK 111
Query: 123 SDVLQSLKYVQYICQKSRSNKHVVRNAELIPMIVDMLKSSSRRVRCKA 170
+V++ +K ++ Q++ + ++ E++ M ++RR+ C+
Sbjct: 112 LNVVEEIKNLKKFGQEALGREETLQKLEVLAM-----DGNNRRLMCEC 154
>AT2G45920.1 | Symbols: | U-box domain-containing protein |
chr2:18899363-18901097 FORWARD
Length = 400
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F+CP++ +VM+DP +G T+E EAI W G T P+T +L T+L P++A
Sbjct: 329 FICPISLEVMKDPQLAADGFTYEAEAISTWLQ-----GGHETSPMTNTKLHHTKLVPNLA 383
Query: 93 LRNTIEEW 100
LR+ I+EW
Sbjct: 384 LRSAIQEW 391
>AT1G01660.1 | Symbols: | U-box domain-containing protein |
chr1:240057-242608 REVERSE
Length = 568
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 7/77 (9%)
Query: 28 PIYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTEL 87
P Y F+CP++++VMR+P +G T+E E++ +W D+G + T P+T +L L
Sbjct: 498 PSY--FICPISQEVMREPRVAADGFTYEAESLREWL----DNGHE-TSPMTNLKLAHNNL 550
Query: 88 NPSIALRNTIEEWTARN 104
P+ ALR+ I+EW RN
Sbjct: 551 VPNHALRSAIQEWLQRN 567
>AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | U-box domain-containing
protein | chr1:24637218-24638513 FORWARD
Length = 431
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 29 IYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELN 88
I F CP++ ++M+DPV + +G T++RE IEKWF +SG + TCP+T L S E
Sbjct: 33 IPSQFQCPISYELMKDPVIIASGITYDRENIEKWF----ESGYQ-TCPVTNTVLTSLEQI 87
Query: 89 PSIALRNTIEEWTA 102
P+ +R I+ W
Sbjct: 88 PNHTIRRMIQGWCG 101
>AT3G18710.1 | Symbols: PUB29, ATPUB29 | PUB29 (PLANT U-BOX 29);
ubiquitin-protein ligase | chr3:6434234-6435481 REVERSE
Length = 415
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 35/156 (22%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F CP++ VMR PV+L G T++R +I++W + G TCP T + LK+ + P++
Sbjct: 16 FKCPISLDVMRSPVSLCTGVTYDRASIQRWLD-----GGNNTCPATMQLLKTKDFVPNLT 70
Query: 93 LRNTIEEWTARNEAVQLDMARRSLNLTNP--------------ESDVL--------QSLK 130
L+ I W+ D R N +P E +VL +K
Sbjct: 71 LQRLINIWS--------DSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMSLENLMK 122
Query: 131 YVQYICQKSRSNKHVVRNAELIPMIVDMLKSSSRRV 166
V+++ + + + + E +PM+VD++++ ++
Sbjct: 123 IVRFVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKI 158
>AT5G57035.1 | Symbols: | ATP binding / kinase/ protein kinase/
protein serine/threonine kinase/ ubiquitin-protein
ligase | chr5:23080743-23083819 FORWARD
Length = 789
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 8/80 (10%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
+ CP+ K++M DP +G T+ER+AI++W + +D P+T+ LK ++L P+
Sbjct: 712 YYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQD-----VSPVTKHRLKHSDLTPNHT 766
Query: 93 LRNTIEEWTARNEAVQLDMA 112
LR+ I EW +R+ +LD++
Sbjct: 767 LRSAIREWRSRS---RLDLS 783
>AT5G09800.1 | Symbols: | U-box domain-containing protein |
chr5:3043123-3044352 REVERSE
Length = 409
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Query: 25 YIEPIYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKS 84
YI + F CP++ VM+ PV+L G T++R +I++W D G TCP T + L++
Sbjct: 7 YITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWL----DDGNN-TCPATMQILQN 61
Query: 85 TELNPSIALRNTIEEWTARNEAVQLDMARRSLNLTNPESD 124
E P++ L I+ W+ D R + +PESD
Sbjct: 62 KEFVPNLTLHRLIDHWS--------DSINRRADSESPESD 93
>AT1G49780.1 | Symbols: PUB26 | PUB26 (PLANT U-BOX 26); binding /
ubiquitin-protein ligase | chr1:18429024-18430289
REVERSE
Length = 421
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F CP++ +M DPVT+ GQT++R +I+ W + TCP+T+ L L P+
Sbjct: 18 FRCPISLDLMSDPVTISTGQTYDRTSIDSWI-----AMGNTTCPVTRVALSDFTLIPNHT 72
Query: 93 LRNTIEEWTARNEA 106
LR I+EW N +
Sbjct: 73 LRRLIQEWCVANRS 86
>AT2G45910.1 | Symbols: | protein kinase family protein / U-box
domain-containing protein | chr2:18894520-18898212
FORWARD
Length = 834
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 13 SQSEDSYQFER--QYIEPIYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSG 70
S S+ R I P Y F+CP+ ++VM+DP +G T+E EAI W + D
Sbjct: 747 SGGSSSFHLGRNEHRIAPPY--FICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHD-- 802
Query: 71 KKLTCPLTQKELKSTELNPSIALRNTIEEW 100
T P+T +L T L + ALR+ I+EW
Sbjct: 803 ---TSPMTNVKLSHTSLIANHALRSAIQEW 829
>AT3G54790.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr3:20281830-20284363 REVERSE
Length = 760
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 10/88 (11%)
Query: 28 PIYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTEL 87
P Y F CPL+ ++M DPV + +GQTF+R +I+KW D+G + CP T++ L EL
Sbjct: 239 PPY--FRCPLSTELMLDPVIVASGQTFDRTSIKKWL----DNGLAV-CPRTRQVLTHQEL 291
Query: 88 NPSIALRNTIEEWTARNEAVQLDMARRS 115
P+ ++ I W EA ++++A S
Sbjct: 292 IPNYTVKAMIASWL---EANRINLATNS 316
>AT3G54790.2 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr3:20281830-20284255 REVERSE
Length = 724
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 10/88 (11%)
Query: 28 PIYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTEL 87
P Y F CPL+ ++M DPV + +GQTF+R +I+KW D+G + CP T++ L EL
Sbjct: 203 PPY--FRCPLSTELMLDPVIVASGQTFDRTSIKKWL----DNGLAV-CPRTRQVLTHQEL 255
Query: 88 NPSIALRNTIEEWTARNEAVQLDMARRS 115
P+ ++ I W EA ++++A S
Sbjct: 256 IPNYTVKAMIASWL---EANRINLATNS 280
>AT2G23140.1 | Symbols: | binding / ubiquitin-protein ligase |
chr2:9845696-9849105 REVERSE
Length = 829
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 29 IYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELN 88
I F CPL+ +VM DPV + +GQT+E+ I++W D G K+ CP T++ L T L
Sbjct: 233 ILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWI----DLGLKV-CPKTRQTLTHTTLI 287
Query: 89 PSIALRNTIEEWTARNE 105
P+ ++ I W N+
Sbjct: 288 PNYTVKALIANWCETND 304
>AT4G21350.1 | Symbols: B80, PUB8 | PUB8 (PLANT U-BOX 8); binding /
protein binding / ubiquitin-protein ligase/ zinc ion
binding | chr4:11356143-11357267 REVERSE
Length = 374
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTE-LNPSI 91
F CP++ ++M DPV L++G TF+R +I++W DSG + TCP+T+ L T L P+
Sbjct: 9 FRCPISLEIMSDPVILQSGHTFDRVSIQQWI----DSGNR-TCPITKLPLSETPYLIPNH 63
Query: 92 ALRNTIEEWT 101
ALR+ I +
Sbjct: 64 ALRSLILNFA 73
>AT5G51270.1 | Symbols: | protein kinase family protein |
chr5:20835137-20838262 REVERSE
Length = 819
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F CPL K VM++P +G T++R AIE+W R T P+T L++ L P+
Sbjct: 753 FFCPLLKDVMKEPCIAADGYTYDRRAIEEWMENHR------TSPVTNSPLQNVNLLPNHT 806
Query: 93 LRNTIEEWTARNE 105
L I EW RN+
Sbjct: 807 LYAAIVEWRNRNQ 819
>AT5G67340.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr5:26864996-26867450 FORWARD
Length = 707
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 101/253 (39%), Gaps = 70/253 (27%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F C L+ ++M DPV + +GQTFER I+KW D G + CP T++ L T L P+
Sbjct: 244 FRCSLSLELMTDPVIVASGQTFERVFIQKWI----DMG-LMVCPKTRQALSHTTLTPNFI 298
Query: 93 LRNTIEEWTARNEAVQLDM---------------ARRSLNLTNPESDVLQS--LKYV--- 132
+R + W N D + R+ + N S+ L + L+ V
Sbjct: 299 VRAFLASWCETNNVYPPDPLELIHSSEPFPLLVESVRASSSENGHSESLDAEELRQVFSR 358
Query: 133 ---------QYICQKSRSNKHVV-------------------RNAELIPM---------- 154
+ +C+ R+N R+ +IP
Sbjct: 359 SASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHPGIIPATVRETGSSSS 418
Query: 155 -------IVDMLKSSSRRVRCKALETLKTVIEEDVDNKAILAEGDTVRTIVKLLSHEQSK 207
++D LKSSS + +A ++ + DN+ ++A + + ++V LL +
Sbjct: 419 IETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDER 478
Query: 208 EREEAVSLLHELS 220
+ +AV+ L LS
Sbjct: 479 IQADAVTCLLNLS 491
>AT4G25160.1 | Symbols: | protein kinase family protein |
chr4:12903360-12906669 REVERSE
Length = 835
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F+CPL K VM +P +G T++R AIE+W E T P+T L S L P+
Sbjct: 770 FICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHN------TSPMTDSPLHSKNLLPNYT 823
Query: 93 LRNTIEEW 100
L I EW
Sbjct: 824 LYTAIMEW 831
>AT1G01680.1 | Symbols: | U-box domain-containing protein |
chr1:246411-248329 REVERSE
Length = 308
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 27 EPIYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTE 86
+P + F CP++ ++MRDP +G T+E E KW R G+ T P T K L++
Sbjct: 231 DPRLEDFKCPISMEIMRDPHVAADGFTYEAEEFRKWL---RSGGR--TSPKTNKPLENHN 285
Query: 87 LNPSIALRNTIEEWTARN 104
L P+ LR I++W +N
Sbjct: 286 LVPNHTLRIIIKDWLEKN 303
>AT5G37490.1 | Symbols: | U-box domain-containing protein |
chr5:14887744-14889051 FORWARD
Length = 435
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F CP++ +M+DPV + G T++R +IE W N SG K TCP+T L + + P+
Sbjct: 35 FQCPISIDLMKDPVIISTGITYDRVSIETWIN----SGNK-TCPVTNTVLTTFDQIPNHT 89
Query: 93 LRNTIEEW 100
+R I+ W
Sbjct: 90 IRKMIQGW 97
>AT1G56040.1 | Symbols: | binding / protein binding /
ubiquitin-protein ligase | chr1:20960356-20962334
REVERSE
Length = 485
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 32 TFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSI 91
+F CP+T++VM+DP +G T+E E+I KW + +G + T P+T L L P+
Sbjct: 421 SFFCPITQEVMKDPHFAADGFTYEAESIRKWLS----TGHQ-TSPMTNLRLSHLTLVPNR 475
Query: 92 ALRNTIEE 99
ALR+ IEE
Sbjct: 476 ALRSAIEE 483
>AT5G65500.1 | Symbols: | ATP binding / kinase/ protein kinase/
protein serine/threonine kinase/ protein tyrosine
kinase/ ubiquitin-protein ligase |
chr5:26181093-26183997 REVERSE
Length = 791
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 29 IYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELN 88
I F+CP+ ++VM++P +G ++E EAI++W + D T P+T L L
Sbjct: 715 IPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHD-----TSPMTNLRLDYQMLT 769
Query: 89 PSIALRNTIEEWTARNEA 106
P+ LR+ I++W ++ A
Sbjct: 770 PNHTLRSLIQDWHSKRAA 787
>AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | U-box domain-containing
protein | chr5:25842119-25843381 REVERSE
Length = 420
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F CP++ VM+ PV+L G T++R +I++W + G TCP T + L++ + P+
Sbjct: 14 FRCPISLDVMKSPVSLCTGVTYDRASIQRWLD-----GGNNTCPATMQILQNKDFIPNRT 68
Query: 93 LRNTIEEWT 101
L+ IE W+
Sbjct: 69 LQRLIEIWS 77
>AT1G01670.1 | Symbols: | U-box domain-containing protein |
chr1:242943-245163 REVERSE
Length = 365
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 26 IEPIYDTFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKST 85
IEP F+CP++K +M++P +G T+E + +W N G+K P+T L++
Sbjct: 292 IEPP-QCFICPISKDIMQNPHVAADGYTYEADEFRRWLNH---GGEK--SPMTNLRLENR 345
Query: 86 ELNPSIALRNTIEEW 100
L P++ LR+ I++W
Sbjct: 346 NLIPNLVLRSAIKDW 360
>AT3G49060.1 | Symbols: | protein kinase family protein / U-box
domain-containing protein | chr3:18187386-18191878
REVERSE
Length = 805
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
++CP+ ++VM+DP+ +G T+E EAI +W D T P+T +++ L P+ A
Sbjct: 739 YLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHD-----TSPMTNLKMEDCNLIPNHA 793
Query: 93 LRNTIEEW 100
L I++W
Sbjct: 794 LHLAIQDW 801
>AT5G61550.1 | Symbols: | protein kinase family protein |
chr5:24748325-24751558 FORWARD
Length = 845
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F+CPL K VM +P +G T++REAIE+W + K T P+T L + L +
Sbjct: 779 FICPLLKGVMNEPCVAADGYTYDREAIEEWLRQ------KDTSPVTNLPLPNKNLIANYT 832
Query: 93 LRNTIEEW 100
L + I EW
Sbjct: 833 LYSAIMEW 840
>AT5G18340.1 | Symbols: | U-box domain-containing protein |
chr5:6070640-6072198 REVERSE
Length = 456
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F C L+K +M DPV + +GQT+E+ I +W N LTCP ++ L L P+
Sbjct: 78 FKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNH------DLTCPTAKQVLYRVCLTPNHL 131
Query: 93 LRNTIEEWTARNE 105
+ I W N+
Sbjct: 132 INELITRWCLANK 144
>AT5G61560.1 | Symbols: | protein kinase family protein |
chr5:24753476-24756506 FORWARD
Length = 796
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F CP+TK VM +P +G T+E+ AI++W + S P+T S L P+ +
Sbjct: 729 FYCPITKDVMENPCVASDGYTYEKRAIKEWLQKNHKS------PMTDLPFPSDSLLPNHS 782
Query: 93 LRNTIEEW 100
L + I+EW
Sbjct: 783 LLSAIKEW 790
>AT2G19410.1 | Symbols: | protein kinase family protein |
chr2:8404901-8409012 REVERSE
Length = 801
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
+ CP+ +++M +P +G T+ER+AI W K P+T+++L +L P+
Sbjct: 729 YFCPILREIMEEPEIAADGFTYERKAILAWLE------KHNISPVTRQKLDHFKLTPNHT 782
Query: 93 LRNTIEEWTAR 103
LR+ I +W +R
Sbjct: 783 LRSAIRDWKSR 793
>AT5G18330.1 | Symbols: | U-box domain-containing protein |
chr5:6068474-6070042 REVERSE
Length = 445
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 33 FVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECRDSGKKLTCPLTQKELKSTELNPSIA 92
F+C L+ ++M +P+ + +GQTFE+ I +W R TCP T++ L + P+
Sbjct: 69 FICTLSNKIMIEPMLIASGQTFEKSYILEWLKHER------TCPRTKQVLYHRFMIPNHL 122
Query: 93 LRNTIEEW 100
+ I+EW
Sbjct: 123 INEVIKEW 130